Escherichia marmotae: C1192_24150
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Entry
C1192_24150 CDS
T05353
Name
(GenBank) DUF4092 domain-containing protein
KO
K10939
accessory colonization factor AcfD
Organism
ema
Escherichia marmotae
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DUF4092
Peptidase_M60
M60-like_N
Trypan_PARP
Neisseria_TspB
Motif
Other DBs
NCBI-ProteinID:
AUT30048
LinkDB
All DBs
Position
pEM148:complement(50329..54912)
Genome browser
AA seq
1527 aa
AA seq
DB search
MNRKFKYKKSLLAAILSSTLLAGCDSGGSGTSTIMPPVDSGAGDLPDVKPAPTPNPEPLP
DPEPIPNPKPIPEPTPNPEPIPDPEPSPMPEPEPVPTKTGYLTLGGSLRVTGATCNSESS
DGFTFTPGDTISCMVGSTTVATFDTLPEAARSLRSVEKVSFNLEDALELAGAENKKNNAI
SLVTSSNSCPADTERLCLIFSSVLDRARFEKLYKKIDLAEGDFSKLVNEEVENNAATNKA
PSTHTSSVVPVTTPGAKPDLNASFVSANAEQFYQYQPTEIILSEGKLLDSQRNGVAGVNY
YTNSGRGVTGDNGEFSFSWGETITFGIDTFELGSVRGNKSTITLTELGDEVRGANIDQLI
HRYSKAGQNNTRVVPEDVRKVFAEYPNVINEIINLSLSNGATLGNGDQVVTLPNAFIEQL
NTGQAKEIDNAICAKTDGCNLARWFSLTTRNVNEGQIQSIINKLWGVDTNYKSVSKFHVF
HDSTNFYGSTGSARGQAVVNISNAAYPVMMARNDKNYWLAFGEKRAWDKNELAYITEAPS
LVEPENVTRDTATFNLPFISLGQVGDGKLMVIGNPHYNSILRCPNGYSWNGGVNKDGQCT
LNSDPDDMKNFMENVLRYLSNELWLPDTKSTMTVGTNLENVYFKKAGQVLGNRAPFAFHE
DFAGITVKPLTSYGNLNPDEVPLLILNGFEYVTQWSGDPYAIPLRADTSKPKLTQQDVTD
LIAYLNKGGSVLIMENVMSNLKEESASGFVRLLDAAGLSMALNKSVVNTDPQGNPNRVRQ
QRATGIWVYERYPVVEGALPYTIDPKTGEVTWKYQTDNKPDKKPNLEVASWLEDVDGKQE
TRYAFIDEADHKTSESLAAAKKKILDAFPGLQECKDSTYHYEINCLEYRPGTGVPVTGAM
YVPQYTQLNLSADTAKAMLQAADLGTNIQRLYQHELYFRTKGRQGERLSSVDLDRLYQNM
SVWLWNDTAYRYESDKDDELGFKTFTEFLNCYTNNAYTGGTQCSADLKQSLVDNKMIYGE
GNKVGMMNPSYPLNYMEKPLTRLMLGRSWWDLNIKVDVEKYPGAVSVGGEEVTETISLYS
NPTKWFAGNMQSTGLWAPAQQDVTIKSSASVPVTVTVALADDLTGREKHEVALNRPPRVT
KTYSLAANGELTFKVPYGGLIYIKGNSSTNESASFTFTGVVKAPFYKDGKWQHDLNSPAP
LGELESGAFVYTTPKKNLNASNYIGGLEQFSKDLDTFASSMNDFYGRNDENGNHRMFTYE
ALTGHKHRFTNDVQISIGAAHSGYPVMNSSFSPNSTTLPTTPLNDWLIWHEVGHNAAETP
LTVPGATEVANNVLALYMQDRYLGKMNRVAEGITVAPEYLDESNGQAWARGGAGDRLLMY
AQLKEWAEKNFDIKQWYPEGTTLPAFYSEREGMKGWNLFQLMHRKARGDEVGKTRFGDKN
YCAESNGNAADTLMLCASWVAQKDLSEFFKKWNPGANAYQLPGATEMSFEGGVSQSAYST
LAALHLPKPQQGPEAINKVTEHKMSAE
NT seq
4584 nt
NT seq
+upstream
nt +downstream
nt
atgaacagaaaatttaaatataagaaatcgcttttagcggctattttaagctcaacgctg
ctagccggttgtgatagtggaggttcaggaacgtccaccattatgccgcctgttgattct
ggagcaggggatttaccggacgtaaaacccgctccaacaccgaatccggaaccgcttcct
gatccagagccgataccaaatccgaaaccaattccagagccaacaccaaatccggaaccg
attcctgatccagagccatcaccaatgccggagccagaacctgttcctacgaaaacgggt
tatctgacgctgggtggaagcctgcgagtcactggcgctacttgtaatagtgaatccagc
gacggttttaccttcacgcctggtgacaccatcagttgtatggttggcagtacgacagtc
gcgacattcgataccttaccagaagccgcacgtagcctgcgttcagttgaaaaagtatcg
tttaacctggaggacgcactggaactggcgggggctgaaaataagaaaaacaatgcgatc
tcactggtgacatccagcaacagttgtccggctgatacagagcgactttgtttgatcttc
tcgtcagtgctcgatcgcgcgcgctttgaaaagctgtataagaaaattgacttggctgaa
ggcgatttcagcaagctggtgaatgaagaggtggaaaataatgccgcgaccaataaagcc
ccatcaactcatacctcatcggtagtgcctgttacgacaccgggagctaaaccggatttg
aacgcttcctttgtgtcagctaacgcagaacagttttatcagtatcagcccactgaaatc
attctctccgaaggtaaactgctggatagtcagagaaatggtgttgctggcgtcaactac
tacaccaattctggccgtggtgtaaccggagacaacggtgagttctcctttagctggggg
gaaaccatcacctttggtatcgacacctttgaattgggctcagtacgcggtaataagtcg
accattacgttgacggagttgggggacgaagttcgcggggctaatatcgatcaactgatt
caccgatattcgaaagccggacaaaataatactcgtgtagttccggaggatgtgcgcaag
gtctttgccgaatatcccaacgtgatcaacgagattatcaacctctcgttatccaatggc
gcgacgctgggtaacggtgatcaagttgttacgttaccaaacgcatttatcgaacaatta
aatacgggtcaggcaaaagaaattgataatgcaatctgtgcgaaaaccgatggttgtaac
ctggctcgctggttctctctgacgacgcgtaatgttaatgaaggacagatccaaagcata
atcaataagttgtggggcgtggatacgaactataaatctgttagcaagttccatgtattc
catgactcaaccaacttctatggcagcaccggtagtgcgcggggccaggcagtggtgaat
atctccaatgcagcgtaccctgtgatgatggcgcgtaatgataaaaactactggctggcc
ttcggcgagaaacgtgcctgggataaaaatgagctggcgtacattacggaagcgccatct
cttgttgaacctgaaaacgttacgcgtgatacggcgaccttcaacctgccgtttatctcg
ctggggcaagtcggcgatggcaagctgatggttatcggtaacccacactacaacagcatc
ctgcgttgcccgaacggttacagctggaacgggggcgttaataaagacgggcagtgtacg
ctcaacagcgacccggatgacatgaagaacttcatggagaacgtgctgcgctatctgtca
aatgaactctggctgcctgataccaagagcacaatgaccgtggggacgaatctggaaaac
gtttatttcaaaaaagctggtcaggtattgggaaatcgcgcaccgtttgctttccatgag
gattttgccgggatcacggttaaaccgttgaccagttatggcaatctgaatcctgatgaa
gttcctctgttaatcctcaatggctttgagtatgtgactcaatggtcaggtgatccctat
gcgataccactgcgtgccgacaccagcaagccgaagttgactcagcaggatgtgaccgac
ctgattgcctatctgaacaaaggtggatcggtgctgatcatggaaaacgtgatgagcaat
cttaaggaagagagcgcgtctggctttgtgcgcctgcttgatgctgcaggcctgtcaatg
gcactcaacaagtcggtggtaaataccgatcctcagggtaacccgaaccgtgttcgtcag
cagcgtgcaacgggcatttgggtgtatgagcgttatccagtcgtagaaggtgcgctgcca
tatactattgatcctaaaacaggagaggttacatggaaatatcagactgataacaagcct
gataagaaaccgaacttggaagttgccagctggctggaggatgtagatggcaaacaggaa
actcgttatgcctttattgatgaagccgatcacaaaacgtccgagtcgctggccgctgcg
aagaagaaaattctggacgcgtttccgggattacaggagtgtaaagactcgacttaccat
tacgagatcaactgtctggaataccgtcctggcacgggcgttccagtaacgggggccatg
tatgttccgcagtatacgcaactgaatcttagcgctgacactgcgaaggcgatgctgcag
gcagcggatttgggcaccaacattcagcgcctgtatcaacatgagctctatttccggacc
aaaggtcgtcagggcgagcgtcttagtagtgtagatctggatcgtttgtaccagaacatg
tcggtctggctgtggaatgacactgcctatcgttacgaaagcgacaaagatgatgagctg
ggctttaaaacatttactgagttcctgaactgctataccaataatgcctataccggcggc
acgcagtgctcagcagatctgaaacagtcgctggtcgataataagatgatttacggtgaa
ggcaataaagttggcatgatgaacccgagctacccgctcaactatatggaaaaaccgcta
acgcgcctgatgctgggccgttcctggtgggatctgaacatcaaggttgatgttgagaag
taccctggagcggtatctgtaggaggagaagaggttactgaaaccatcagcctgtactcg
aatccgaccaaatggtttgcgggtaacatgcagtcaaccggcctgtgggcaccggctcag
caggacgttaccattaagtcttcggcgtcagtcccagtgactgttaccgtggcgttggct
gatgacctgaccggacgtgagaagcatgaagttgcgctgaaccgtccgccaagagtcact
aaaacctattctctggcggctaacggtgaattgacgttcaaggtgccttacggcggtctg
atttatatcaagggtaatagttctaccaatgaatctgccagcttcacctttaccggtgta
gtaaaagcgccgttctataaagacggtaagtggcaacacgatctgaactcaccggctccg
ctgggtgagctggaatcaggcgctttcgtctataccacgccgaagaagaacctgaacgcc
agcaattacattggcggtctggagcaattcagcaaagatctggatacctttgccagctca
atgaatgacttctatggccgtaatgacgaaaacggtaaccaccggatgtttacctatgaa
gcattgacggggcacaaacaccgtttcaccaacgatgtgcagatctctattggtgctgcg
cactctggttatccggtgatgaacagcagcttctcgccgaacagcaccacgctgccgacg
acgccgctgaatgactggttgatctggcatgaagtagggcacaacgccgctgaaacgccg
ctgactgtaccgggtgccactgaagtggcgaacaacgtgctggcgctgtacatgcaggat
cgttatctcggcaagatgaaccgtgtcgctgaaggtattaccgttgcgccggagtatctg
gatgagagcaatggccaggcatgggcacgcggcggtgcgggggaccgcctgctgatgtac
gcacaactgaaggagtgggcagagaaaaactttgatatcaagcagtggtatccagaaggt
acgactctgccagcgttctacagcgagcgtgaagggatgaaaggctggaacctgttccag
ttgatgcaccgtaaagcgcgcggcgatgaggttggcaaaacccggtttggcgacaagaat
tactgtgccgaatccaacggtaacgctgctgatacgctaatgctgtgcgcctcctgggtc
gcccagaaggatctttcggagttctttaagaaatggaatccgggcgcgaatgcttaccag
cttcctggggcgacggagatgagctttgagggcggtgtgagccagtcggcttacagcacg
ctcgcggcgctgcacctgccgaaaccgcagcaaggaccggaagccattaacaaggttacc
gagcataagatgtctgccgagtaa
DBGET
integrated database retrieval system
