Eleginops maclovinus (Patagonian blennie): 134858501
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Entry
134858501 CDS
T09869
Symbol
spg11
Name
(RefSeq) LOW QUALITY PROTEIN: spatacsin
KO
K19026
spatacsin
Organism
emac
Eleginops maclovinus (Patagonian blennie)
Pathway
emac04142
Lysosome
Brite
KEGG Orthology (KO) [BR:
emac00001
]
09140 Cellular Processes
09141 Transport and catabolism
04142 Lysosome
134858501 (spg11)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
emac03400
]
134858501 (spg11)
DNA repair and recombination proteins [BR:
emac03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
Other HR factors
134858501 (spg11)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Spatacsin_C
Motif
Other DBs
NCBI-GeneID:
134858501
NCBI-ProteinID:
XP_063730511
LinkDB
All DBs
Position
2:1041450..1061252
Genome browser
AA seq
2423 aa
AA seq
DB search
MSESSSTEVCVIPENPHCGRVSELRKADLAPGGSLLLGCLRDRGRLEVWDPADREAPPAE
ADGSYADFCWEEEEEEAGGRGSRLLAVGSQFDLKLLEADDRPPISLSLRSEVPAELLLQT
LRERDPGVCELQALQVLSFSAGRGCLLLNCDWLLQLQWLQTDEQPQTISCCRIHTHSADS
HTHSANSHTHSADSHTHSADSHTHSAVHRCVSREAVFSLSCSGLISVCSLSDGRLLATIN
LPLYLSAAQPEDELLSSPSLSCVSSSSSFCLLQVSADLSTAVAVTLNHSAVAVPLDHYFS
LYPDHLLCAAPPSRPPLRPLQPADQDSLWSSGCSLSALGSTFSTDRSWEARLASMYNKAK
PPPSSSSTSSSSPPPWSFSLPHQDSHSSSSSHSRVPLGGATVSFSVPESSAPLLLIVTEF
SAQLTFVSRGNTQTTVALWDMESGSVTQHQAEGEAAPVLRCGERQHRLLLKDSGVFQVLF
SVSQQDLLSRLMLFGSAATVDAVCHLNNWGRCSIPIHSLQAGLKNRQLDTVDFYLKSKEN
ILNPETDQPPTQTLAHSFQELCSALDLLCSAVRESNSEAQSRQFSEQLLNITLSFINRQI
RSVLTNTQHEDLSVRRCVEVLDRYVTELRSYMKRFPWPVGGDTCSTNSADAAPPQEEEEE
EERVEEGDEWEQLQTEEVVRRSILTNQMPRAQAVLRRRGLQEQRLSALRRGGLQEVFTCL
QHRDLHTAHTLLTNMGFSVQQQLRSIVLYTDDCDLRDFVVEQLSGRRFLLEEEVQSVEFM
KQMERVGSLPAARSAETPSHRGVQMVLREGGVGEEVLQELLLRREEEKEEGGGLWRSLRL
DWVRNWDHSCRTAVLLSRLQHTEVTSCDSALLWRYLTALHDRRRVIDWIQSGGSGGGARW
PELTPELVNDSTACSCFLREHILDLLARRGVLVPEELCDLQLLLWRLAQGGGVMSASPPL
PHYRSPLGLDLHGLFISYCLQHGLHFLLYSYLQHHRLTPRNCPQLTNQSLSESQPWFEML
VKIQEISTDLSDPGLVFAASLSSAQVLLPGSGASLSSLLLEGHSLLALAALMFSPGGIDQ
VASQGAVRSERTVDPQLLKMALAPHPKLRAALFPPGPRGGGGGGGSTSDVSVYHLLQALH
PLDPSRLFGWQAANTLNSSELSELPHFSSSHLVSSFALLENLDFLYFLRHGRPSSAFATF
LLQQLSGCSDVPLLLQQALQQVTRLALQCVSVSSVTAACVCFCELLGVCSLKLRVDIRAL
HTVLQSHNTHSAAHHTHNLGVRLAEAEAGAAEELIGCLEAAVTDSLEERGVGRSSYEAAQ
DWSLPVQFCQLHALPLSSVYAAHCAQDAHFIHFLLFVQLHNFPPQQVRLLAAQFGPALQA
HLSLAFQELQVFSQRGGGXRTGRATQTPNTEEAPENPELLQVLLKSQEEAVPGCFLLQEA
LEQRCPLLAVMAACQQGAELVPCLCVWVLTSIDDVTFGEATSHLADAPPHHQWTLHDLSI
IWKTLLGRGHVRPLLRGFRLFQKDCPLVLVLQMFEMCCDYRNFSEAKARLLDFQRTLVSL
RSGSPSPAGGGLPLQWVESQASVLLLSTLQRCSSPFDLHRLLLLLADVDQLLKSNGLDFR
KLSQLSQLLQGSEVSLPPRLLQCTPPSVQQQELQSVVDALQAGGHYSQARQAALLGGLPV
HRLLLTQLLQDVNSQKSKRQWSRLETRVSLWRKCHEQLQADGSDPESASHFFLSQAEEAG
GAELLEVQERCLLFLLSAHWLSRLLPAPRARLERLEKQLWAGRVRGRLLAGAAEKESVFN
LPVPPESNSYELLVKEFSFSSIPSMNTEEGLSVEEGLSVEEGLSVEEGLHAEEGLSADML
SPEERSILGTLVDQLLDEGSIHEASRVCRYFSLQHEDMKLVLRCRGVASGDLQLPTPEDK
VEEEEEEDLQKKISSSPSFSSLSSFVVLPLPEDLVAVQLQRLVDQCRHGNNFCRQVLSLY
QLSKELQVSFKQIHSEDPGSVLQKLLQSEQPERFRKARAFIRAQSLSAESVSGLLASTLL
QALLASTQELQPECQVFRPAEGRDSLLSLIKLCEDPNLVGEKLLQNLSHVPLRELSCIVE
LLIVAHDCFSLTCNMEGIVRVLQAARHLSHAHLAPREHYGLLVRLLTGIGRYNEMTYIFD
LLHQNHRFEMLLRKKMDTDRGQSSSLKTALLDYLKRCLPADSEKHNMVALCFSMRREIGE
NHEMAARTQLKIIESQAWVVTPELKSSLVKVLGLLKDAAESFSKDSCVRQATRCVRTAKL
VALQLHFLKQGSELQLINLHPAELLSAVTALPSCFQVLVVSEAYGYSPDWPQILFQKVIL
SGDFVYLEDFKRLRPLTSALFEDIFKRLDGAPSSVTNARCLLSHCEDVFSRYRLAYQQNL
LDVSNALLQDTHTSGYLRDRLAS
NT seq
7272 nt
NT seq
+upstream
nt +downstream
nt
atgtcggagagcagctccacagaggtgtgtgtgatcccggagaacccgcactgtggccgg
gtgtctgagctccggaaggctgacctggcccccggaggctccctgctcctcggctgtctg
agggaccggggccgcctggaggtgtgggacccagcggacagagaggctcccccggccgag
gcggacgggagctacgcggatttctgctgggaggaggaggaggaggaggcgggggggcgg
gggtccaggctgctggctgtgggctctcagtttgatctgaagctcctggaagcagacgac
cgcccccccatctccctgagcctcaggtctgaggttcctgcagagctcctgctgcagacc
ctccgagagagggaccccggagtgtgtgagctgcaggcgctgcaggtgttgtcgttctct
gcgggccgcggctgcctgctgctcaactgtgattggctgctgcagctgcagtggctgcag
accgacgagcagccacagacgatctcctgctgcaggatccacacacactctgccgacagc
cacacacactctgccaacagccacacacactctgccgacagccacacacactctgccgac
agccacacacactctgctgtgcaccgctgtgtgagcagagaggctgtgttcagcctcagc
tgctccggactcatctctgtgtgtagcctcagtgatggccggctcctggccaccatcaac
ctccctctgtacctgtccgctgctcagccggaagacgagctgctctcctccccttccttg
tcctgcgtctcctcctcctcttccttctgcctcctgcaggtgtcggctgatctgagcaca
gccgtcgccgtcactctgaaccacagcgccgtcgccgtgcccctggaccactacttcagt
ttgtacccggaccacctgctgtgtgccgcccccccctcccggccccccctgcggcccctg
cagccggcggaccaggacagcctgtggagttccggctgcagcctctctgccctcgggtcc
accttcagcaccgaccgctcctgggaggctcgtctggcctccatgtacaacaaagccaag
cctcctccctcgtcctcctctacctcctcctcctcaccccccccctggtccttctccctc
ccccaccaggactcccactcgtcctcctcctcccacagcagggtgcctctcggcggggcg
accgtctccttctccgtcccagagtcctccgctccgttgctgctcatcgtgaccgagttt
tccgcccagctgaccttcgtctcccgcggcaacacgcagactacagtggcattgtgggat
atggagtccgggagcgtgacgcagcaccaggcggagggcgaggcggccccggtgctgcgc
tgcggagagcggcagcaccgactgctgctgaaggactccggtgtgtttcaggtcttgttc
tcggtgtcgcagcaggacttgctcagcaggctgatgttgttcggcagcgcagcgacggtg
gacgcagtctgtcacctgaacaactgggggcgctgttccatccccatccattccctgcag
gccggcctgaagaaccgtcagctggacacggtggatttctacctgaagagcaaagagaac
atcctgaaccccgagaccgatcaaccccccacacagaccctcgcacacagtttccaggag
ctgtgctcagcgttggacctgctctgctcggcggtcagagagtcgaacagtgaggctcag
agtcgtcagttctccgagcagctgctgaacatcacgctgagcttcatcaacagacagatc
cgctcagtgctgaccaacacacagcacgaggacctgagcgtgcggcgctgcgtggaggtt
ctggatcggtacgtcacggagctccggagctacatgaagaggttcccctggcctgtaggg
ggcgacacctgcagcacaaactccgctgatgctgcacccccgcaggaggaggaggaggag
gaggagagggtggaggagggggacgagtgggagcagctgcagacagaggaagtagtgagg
cgctccatcctgaccaatcagatgcctcgggctcaggcagtgctgaggaggcggggcctg
caggagcagcgtctgtcggctctgaggagggggggtctgcaggaggtgttcacctgtctg
cagcacagagacctgcacactgcacacactctgctcactaacatgggtttcagcgtgcag
cagcagctccgcagtatcgtcctctacaccgacgactgcgacctgcgggacttcgtggtg
gagcagctctcaggacgcaggtttctcctcgaggaggaggtgcagagcgtggagttcatg
aagcagatggagagggtggggtcgttgcctgcagcccgctctgcagagacgccatcacac
aggggggtgcagatggtgctcagggaggggggtgttggggaggaggttctgcaggagctg
ctgctaaggagggaggaagaaaaggaagagggaggggggctctggaggagcctcaggctg
gactgggtcaggaactgggaccatagctgcaggacggccgtgctgctgtccagactgcag
cacacagaggtgacttcctgtgactccgcgttgttgtggcgttacctgacggccctccac
gaccggcggcgggtcatcgactggatccagagcggggggtccggggggggtgctcggtgg
cccgagctgaccccggagctggtgaacgacagcacggcctgcagctgcttcctgagggag
cacatcctggacctgctggccaggaggggggtgctggtgccggaggagctgtgtgacctg
cagctgcttctgtggaggcttgctcagggagggggggtgatgtctgcgtctccccccctc
cctcattaccgctcccccctgggtctggacctgcacggcctcttcatctcgtactgcctg
cagcacggcctgcacttcctgctctacagttacctgcagcaccacaggttgacccccagg
aactgcccccagctgaccaatcagagcctgtctgagagccagccctggtttgagatgctg
gtgaagatccaggagatcagcaccgacctctcagacccaggcctggtgttcgcggcctcc
ctctccagcgctcaggtgttgttacctggctccggggcctccctcagcagcctcctgctg
gagggccacagtctgctggctctggctgccctcatgttctcccccgggggaatcgaccag
gtggcgtctcagggggcggtccggtcggagcggacggtggaccctcagctcctgaagatg
gcgctggccccccaccccaaactgagggccgccctgttcccccccgggccgagaggaggc
ggcggcggcggcggctccacctctgacgtctccgtctaccacctgctgcaggcgctgcat
cctctggacccgtcccggctgttcggctggcaggcggcaaacaccctcaactccagcgag
ctgtcggagctgcctcacttctccagctctcacctggtgagcagcttcgctctgctggag
aacctggacttcttgtacttcctgcgtcatggccgcccctcctctgcgttcgccaccttc
ctgctgcagcagctgagcggctgcagcgacgtcccgctgctgctgcagcaggctctgcag
caggtgacccggttggccctgcagtgtgtgagtgtgtcctcggtcaccgcagcgtgtgtg
tgtttctgcgagctgctgggagtctgcagcctgaagctgagggtcgacatccgagcgctg
cacaccgtcctgcagtcacacaacacacactctgctgcacatcacacacacaacctgggt
gtgcggctggcggaggcggaggctggagcagcggaggagctgattggctgcctggaggct
gcagtgacagacagcctggaggagagaggcgtcggcaggtcgtcctacgaggcggctcag
gattggtcgttgccggttcagttctgtcagcttcacgctctgccgctcagctctgtgtac
gccgcgcactgcgcacaggatgcacacttcatccacttcctgttgtttgtccagctgcac
aacttccccccccagcaggtgaggttgctggcggctcagtttggccccgccctgcaggct
cacctgagtctggccttccaggagctgcaggtgttcagccagagggggggggggnngcgc
actggccgagcaacacagacccccaacacagaggaggcccccgagaaccccgagcttctc
caggtgctcctgaagagccaggaggaggcggtgcccggctgcttcctgctgcaggaggcg
ctggagcaacgctgccccctgctggctgtgatggccgcctgccaacagggggcggagctt
gtgccgtgcctctgtgtgtgggtgttgacctccatcgatgatgtcacgttcggagaggcc
acctcccacctggccgacgcccccccccaccaccagtggaccctgcacgacctgtcaatc
atctggaagacgctgctggggcggggccacgtccggcccctgctgcggggcttcaggctc
ttccagaaggactgtcctctggtgctggtgctgcagatgtttgagatgtgttgtgactac
aggaacttctccgaggccaaagccaggctgctggacttccagaggaccctcgtctctctg
cggagcggctccccgagcccggcgggggggggcctccccctgcagtgggtggagagccag
gcgtcggtgctgctgctctccacgctgcagcgatgctcctcgccgtttgacctgcaccgc
ctgctgctgctgctcgctgacgtcgaccagctgctcaaatccaacggtctggacttcagg
aagctgagtcagctgagtcagctgctgcaggggtcagaggtcagcctgcccccccgcttg
ctgcagtgcacccctccctccgtccagcagcaggagctgcagtcggtggtggacgctctg
caggcgggggggcactacagccaggcccggcaggcggcgctgctgggggggctgccggtg
caccgcctgctgctcactcagcttctgcaggatgtaaactcccagaagtccaagcggcag
tggagccgtttggagacccgggtttctctctggaggaagtgtcacgagcagctgcaggcc
gacggcagcgacccggagtcggcctcacacttcttcctgtcgcaggcggaggaggccggg
ggggcggagctgctggaggtgcaggagcgctgcctgctattcctcctctctgcccactgg
ctctccaggctcctcccggcacccagggcccgcttggagcgcctggagaagcagctgtgg
gcgggccgagtgagggggcgcctcctcgccggtgccgcggagaaagagagcgtcttcaac
ctgcctgtcccgccggagagcaactcctacgagctgctggtgaaggagttcagcttctcc
agcatccccagcatgaacacggaggagggcctcagcgtggaggagggcctcagcgtggag
gagggcctcagcgtggaggagggcctccacgcggaggagggtctcagcgcggacatgctg
agtccagaggagaggtccattctgggaacgctggtggatcagctgttggatgaaggcagc
atccatgaggccagcagggtgtgcaggtacttctctctgcagcacgaagacatgaagctg
gtgctgcgctgcaggggggtcgcctccggagacctgcagctgccaacaccagaggataag
gtggaggaggaggaggaggaggatctgcagaagaagatctccagctccccctccttcagc
agcctgtcctccttcgtggtgctccccctccctgaagacctggttgccgtgcagctgcag
agactggtggatcagtgccggcacggaaacaacttctgcagacaagtcctcagcctctac
cagctctccaaggagctgcaggtgtccttcaagcagatccacagcgaggacccgggctcg
gtgctgcagaagctgctgcagtcggagcagccggagcgcttccggaaggcccgggctttc
atccgggctcagagcctgtctgcagagagcgtgtccgggctgctggcctccaccctgctg
caggcgctgctcgcatccacccaggagctgcagcccgagtgtcaggtgttcaggcctgca
gaggggcgggactccctgctgtcactcatcaaactctgtgaggatcccaacctggtggga
gagaagctgctgcagaacctgagccacgttcccctgagagagctgagctgcatcgtggag
ctgctgatcgtggctcacgactgcttcagcctcacctgcaacatggagggcatcgtccga
gtgctgcaggctgcccgacacctgagccacgcccacctggccccccgagagcactacggt
ctgctggtccgtctgctcacagggatcggcaggtataatgagatgacatacatcttcgac
ctgctgcatcagaaccatcgcttcgagatgctgctgaggaagaagatggacacagacaga
ggacagagctccagcctgaagacggctctgctggactacctgaagcgctgcctgcctgca
gacagcgagaagcacaacatggtggcgctgtgcttcagcatgaggagggagatcggagag
aaccacgagatggcagcccgaacgcagctgaagatcatcgagtctcaggcctgggtggtg
actcctgagctgaagagttctctggtcaaagtgctgggtctgctgaaggacgctgcagag
agcttctcaaaggactcgtgtgtgcgtcaggccactcgctgcgtgcggacggcgaagctg
gtggctctgcagctgcacttcctgaagcagggctcggagctgcagctcatcaacctgcac
cctgcagagctgctgagcgccgtcaccgcgctgccgagctgcttccaggtgttggtggtg
tccgaggcgtacggctacagtccggactggcctcagattttgttccagaaggtgatcctg
agcggagacttcgtttacctggaggactttaaacgcctccgccccctcacctccgccctg
ttcgaggacattttcaaaaggctggacggggctcccagcagtgtcactaacgctcgctgc
ctgctctctcactgtgaagacgtgttcagccgctacaggctggcctaccagcagaacctg
ctggacgtcagcaatgctctgctgcaggacacacacacctccggatacctgagggaccgg
ctggccagctga
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integrated database retrieval system
