Eleginops maclovinus (Patagonian blennie): 134858712
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Entry
134858712 CDS
T09869
Symbol
ighmbp2
Name
(RefSeq) DNA-binding protein SMUBP-2
KO
K19036
ATP-dependent RNA/DNA helicase IGHMBP2 [EC:
5.6.2.5
5.6.2.3
]
Organism
emac
Eleginops maclovinus (Patagonian blennie)
Brite
KEGG Orthology (KO) [BR:
emac00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
emac03009
]
134858712 (ighmbp2)
03012 Translation factors [BR:
emac03012
]
134858712 (ighmbp2)
Enzymes [BR:
emac01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.3 DNA 5'-3' helicase
134858712 (ighmbp2)
5.6.2.5 RNA 5'-3' helicase
134858712 (ighmbp2)
Ribosome biogenesis [BR:
emac03009
]
Eukaryotic type
Other ribosome biogenesis factors
134858712 (ighmbp2)
Translation factors [BR:
emac03012
]
Eukaryotic type
Initiation factors
Initiation associated factors
134858712 (ighmbp2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA_11
AAA_12
SMUBP-2_HCS1_1B
AAA_30
R3H
AAA_19
zf-AN1
DEAD
Viral_helicase1
Helicase_RecD
IstB_IS21
nSTAND3
ResIII
AAA_22
AAA_16
UvrD-helicase
SLFN-g3_helicase
Flavi_DEAD
DnaB_C
PhoH
ABC_tran
AAA_25
NPHP3_N
AAA
SRP54
AAA_31
HEM4
ATPase
Zot
UvrD_C_2
Motif
Other DBs
NCBI-GeneID:
134858712
NCBI-ProteinID:
XP_063730814
LinkDB
All DBs
Position
2:10894704..10902687
Genome browser
AA seq
992 aa
AA seq
DB search
MAVEQFVSKTLELLQEEREAEIEENRIWQENISLKDLQSKGVCLLKLQVSSQSTGLYGRT
VVIFEPRKHLGFSSLPSNNFGPGDIVGLYDTGGCTAASQIGTGIVTRVSQTAISVAFDDS
NDGLSFDTDGLHNLLKLANDVTYKRMKNALNTLNGYRNGPAANLIDVLFGNSKPSSQTQP
NEFKFFNSNLDDSQREAVSFTLSQRELAVIHGPPGTGKTTTVVEIILQAVKQGQKVLCCA
PSNVAVDNLVERLAQCKAKVLRLGHPARLLESIQKHSLDAILAQSDNADIIADIRKDMDK
AFVGMKKMREKGDRVNFKREIGELRKELKTREATAIAQILKSADVVLSTNTGACDTGPLK
YLPAEHFDWVVIDECAQALESSCWIALLRARKCILAGDYKQLPPTIKSQKAASKGLSLSL
MERLIQMYGNSVVRMLTVQYRMNSAIMDWASKEMYQGRLTAHSSVENHLLKDLAGVACVE
ETSTPLLLIDTAGCGLSEMEVTDEQSKGNQGEVDIVELHIKALTDAGVKAKDIAVIAPYN
LQVDLLRQKLSARYPELEIKSVDGFQGREKEAVVLSLVRSNRKGEVGFLSEDRRINVAIT
RARRHVAVVCDTQTVQNHAFLKSLINHMTKCGEVRTAFEYIQDIVPQNYTRDPKDTKANT
KSSSDSTSTKHKVKDQPSSRTKPQQKKSTGSSGHENTAGKEKHAKSSITALTEEEQKKNR
TAEITAQVESFLKASNQSELQFPSSFNSHDRLLVHQIAEELGLVHESKGEGKDRCITVAR
PLGSTPAEVPTLEEEKEEEKAQNPQEEQLSETTLDLKSLHLERMKREQQKREENAQQKKQ
QNNVLPAQVQPSKKPKSAKAKSKTKAGACGIAAAAAPDDDFDTLINAVIKAERVCSFVKC
KASVLMLGQLCLFCNRQYCLSHHIPEVHGCGDKAKSHARMRISKEGVLYAGSGKKDKSMD
PNKKAYLQRKLDSKLKDMSSQRKPKQKENESQ
NT seq
2979 nt
NT seq
+upstream
nt +downstream
nt
atggcggtggaacagtttgtgtcaaaaaccctcgagctactacaggaggaaagggaggct
gaaatagaggagaacaggatatggcaggagaacatctctctgaaggatcttcaaagtaaa
ggagtatgcctgctgaaattgcaggtaagcagtcagtccacaggcctgtacggtcgcaca
gtcgtcatcttcgagccaagaaaacatttgggtttttcatctctgccaagcaacaacttt
ggacctggggacatagttggcttgtatgacactggtggatgcaccgccgcctcacagatt
ggcacggggatagtgacaagggtcagccagactgcgataagtgtggcctttgacgattct
aacgatggcctgagctttgatacagatggtcttcacaacctcttgaaattggcaaatgat
gttacctacaaacgaatgaaaaatgccttgaatacattaaatggatacagaaatggacca
gcggccaatctgatagacgttctctttggaaactcaaaaccttcttcacaaacacagcca
aacgagtttaaattctttaactccaacctggatgattcccagagagaagctgtgtccttt
actctgtctcagagagaattagctgtgattcatggaccaccaggcactgggaaaaccacc
actgtggttgagatcatcctgcaagcagtgaaacaaggccaaaaggtcttgtgctgtgcg
ccctctaacgtggcagtggataatttagtggagaggttagcccaatgcaaggctaaagtc
ctcaggctgggtcaccctgccagactgctggagtccatacagaaacactcactggatgcc
atcctcgctcagagtgacaatgcagacatcattgcagacatccgtaaagacatggacaaa
gcctttgtgggaatgaagaagatgcgtgaaaaaggggaccgagtgaacttcaaaagggaa
ataggggagctgagaaaagagctgaagaccagagaggcaacagccatcgcccagatcctc
aaaagtgccgatgttgtgttatcaaccaacacaggtgcttgtgacactggtccgctgaag
tacctgccagcagagcactttgattgggtggtgatagacgagtgcgctcaggcgctggag
agcagctgctggatcgccctgctccgagcgcgcaagtgcatcctggctggagactacaag
cagttaccaccaaccatcaaatcacaaaaagctgcatcaaagggcttgtccctcagtctc
atggagagactcatccagatgtacgggaactcggtggtccgtatgctaacagtccagtac
cgcatgaacagtgccatcatggactgggcctccaaagagatgtaccagggacgacttacc
gctcacagctctgtagagaatcacctgttaaaagatctagcaggagttgcttgtgttgag
gagaccagcacgccgctactgcttatcgacactgcaggctgcggtctgagcgagatggag
gtcaccgatgagcagtccaaaggcaatcaaggtgaggtcgacattgttgaacttcacata
aaagccttgactgacgctggggttaaagctaaagacatcgctgttatcgctccgtacaat
ctacaagtggatcttctgcgtcaaaagctttctgcgaggtaccctgagctggagataaag
tcagtggatgggtttcagggcagagagaaagaggccgtggtgttgtcgttagttcggtcc
aacagaaaaggggaagttggatttctgtctgaggaccgaaggattaacgtcgctataacg
cgtgcgagacgtcacgttgctgttgtgtgcgacacgcagactgtccagaatcacgctttc
ctgaagtccctgatcaatcacatgaccaaatgcggcgaggtcagaacagcctttgagtac
atccaagacatcgtgccacaaaactacacccgtgaccccaaagacacaaaggctaacaca
aagtcttccagcgactccacgtccaccaaacacaaggttaaagatcagccttccagcagg
acgaagcctcagcaaaagaagtcaacagggagcagcggtcatgaaaacactgcaggaaaa
gagaagcacgcgaagtccagcataacagcactgaccgaggaagagcagaagaagaacaga
actgctgagatcacagcgcaggtggagagctttctaaaggcctccaatcagagtgaacta
cagttcccatcatcctttaactctcatgaccgcctgctggttcaccagatcgctgaggag
ctgggcctcgtgcatgagagtaaaggcgaggggaaagacaggtgcatcactgtcgccaga
cccctggggtcaacaccagccgaggtgccaacactagaagaagagaaggaagaagaaaaa
gcccagaatccccaggaagagcagctgtctgaaactacattagacctgaaaagtttacat
ttggagcgaatgaagagggagcagcagaagagggaagaaaatgcccaacaaaaaaagcaa
cagaacaacgtcctgccagctcaggtccagccatccaagaaaccaaagtctgctaaagca
aagagtaaaacgaaggccggcgcctgcggcatcgctgctgccgccgctccagatgacgac
tttgacacactcatcaacgccgtcataaaggctgagcgtgtgtgcagttttgtgaagtgt
aaagcttctgtgctgatgctcggacagctttgcctgttctgcaataggcagtactgtctc
agtcatcatataccagaggttcacggctgcggagataaagccaagtctcatgctcggatg
agaataagcaaagagggcgttctttacgctgggagcgggaagaaagataaatccatggac
cccaataagaaagcctacctgcagaggaaactggactctaaactgaaagatatgtcatca
cagaggaagccaaaacagaaagaaaatgaaagtcaataa
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