Eleginops maclovinus (Patagonian blennie): 134858857
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Entry
134858857 CDS
T09869
Symbol
col13a1
Name
(RefSeq) collagen alpha-1(XIII) chain isoform X1
KO
K16617
collagen type XIII alpha
Organism
emac
Eleginops maclovinus (Patagonian blennie)
Brite
KEGG Orthology (KO) [BR:
emac00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
00536 Glycosaminoglycan binding proteins [BR:
emac00536
]
134858857 (col13a1)
Glycosaminoglycan binding proteins [BR:
emac00536
]
Heparan sulfate / Heparin
Extracellular matrix molecules
134858857 (col13a1)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Collagen
Motif
Other DBs
NCBI-GeneID:
134858857
NCBI-ProteinID:
XP_063731089
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Position
22:complement(1770427..1824303)
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AA seq
529 aa
AA seq
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MGIPGRMGLKGRAGEQGAPGEPGLSIIGPRGPPGQPGTRGFPGFPGPIGLDGKSGQNGPK
GDMGQRGVKGLQGEPGPKGEKGVCGDYSHRKRRIVQPCVGQLAAQGEPGAQGPPGPPGPP
GPSGAPGLNGATGPAGKPGEPGKPGKDPRVSFASLLPGLKGEPGVPGQKGDRGDAGPVGP
EGSKGIQGDLGTKGDKGEPSIAATGTKGEPGSPGLPGQLGPKGDTGNKGDKGEAGPEGSV
GPRGLPGPTGEPGKAEIHNNENDIRNIPLMGPPGLPGPSGPPGVPGNKGEVGLPGAPGLD
GDKGPRGKPGDIGPAGLSGPEGPRGESGVMGFPGPKGDRGDMGPSGSPGPKGEPGEGVRS
EMMYCPPGPPGPPGPVGPLGTQGFSGPKGEPGIGIRGEKGATGLKGDKGDRGHLGLPGAH
GLDGRPGPVGLIGPAGVSGPAGPKGERAEKGDAGLPGPIGPQGIPGLVGPQGLKGNRGER
GKKGNRGAKGDKGDQGAPGLDAPCPLGDDGLPVPGCWNKGQHPFQLAKK
NT seq
1590 nt
NT seq
+upstream
nt +downstream
nt
atggggattcctgggagaatgggcttaaagggacgagcaggggagcagggagcaccaggc
gagcccggtctgtccatcattggaccgagaggacctcctggacaacctggaacaagagga
ttcccaggatttccaggtccaattgggttggatggcaagtctggacagaacggaccgaag
ggagacatgggtcagcgtggtgttaaaggactccagggggagccaggacccaagggggag
aagggtgtttgtggagactactcacaccggaagcgacgtattgtacagccctgtgtggga
cagttggccgcacagggcgaacctggagcgcaaggacccccaggtcctccaggacccccc
ggaccttcaggggccccaggcctgaatggcgcaaccggcccagcaggtaagcctggtgag
ccaggcaaacctggaaaagacccgagggtaagcttcgcttcacttttaccaggactaaag
ggtgaaccaggtgtgcctggacaaaagggggatcgaggggatgcgggcccagtaggtcct
gaaggctcaaagggaatacagggagacctcgggacaaagggtgacaagggagagccaagc
atcgctgccacaggaactaaaggagaaccgggttcaccgggactaccaggccagttggga
cccaagggtgacacaggcaacaagggagacaagggggaagcaggacctgaaggctcagtt
ggaccaagaggtctcccaggcccaactggggagccaggaaaggctgaaatccacaacaat
gaaaatgatattcgcaacatccctctgatgggcccccctgggttacctggaccttcaggg
ccccctggagtccctggcaacaagggtgaagttggtctgccgggtgctccaggtctcgac
ggagataagggacccagagggaaacctggagatattggtcctgcaggcctatccggtcct
gaaggtcccagaggggagagtggtgtcatgggcttcccgggacccaaaggagacaggggc
gacatgggtccatctggatcacctggtcctaaaggagaacctggagaaggggtcaggtca
gaaatgatgtactgtcctccagggcccccgggacctccaggaccagttgggccattggga
actcaaggattttcagggcctaagggggaaccaggcataggcatccggggagaaaaggga
gcgacgggcctcaagggtgacaagggggacagaggccatctcggacttcctggggctcat
gggttagacggcagaccgggtccagtggggctaataggaccagcaggtgtttcaggaccc
gcaggaccaaagggagagagagctgagaagggagatgcaggattaccaggaccaatcggg
cctcaaggcatccctggtttagtaggaccacaaggactcaaagggaaccggggagagagg
ggcaagaaaggcaacaggggggccaaaggggataagggagaccaaggagcacctggatta
gatgccccctgtccgttgggagacgatggcttacctgtaccaggatgttggaataaaggt
caacatcctttccaactggctaagaagtag
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