Eleginops maclovinus (Patagonian blennie): 134858994
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Entry
134858994 CDS
T09869
Symbol
vps8
Name
(RefSeq) vacuolar protein sorting-associated protein 8 homolog isoform X1
KO
K20178
vacuolar protein sorting-associated protein 8
Organism
emac
Eleginops maclovinus (Patagonian blennie)
Pathway
emac04148
Efferocytosis
Brite
KEGG Orthology (KO) [BR:
emac00001
]
09140 Cellular Processes
09141 Transport and catabolism
04148 Efferocytosis
134858994 (vps8)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
emac04131
]
134858994 (vps8)
Membrane trafficking [BR:
emac04131
]
Endosome - Lysosome transport
Tethering complex
CORVET complex
134858994 (vps8)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Beta-prop_VPS8
TPR_Vps8
VPS8_N
zf_RING_Vps8
TPR_Vps41
Clathrin
WD40_CDC20-Fz
TPR_VPS8_2
zf-RING_11
zf-RING_Vps41
zf-RING_5
zf_RING_Vps8_fungal
zf-RING_UBOX
zf-RING_2
PHD_4
zf-C3H2C3
Beta-prop_EML_2
zf-C3HC4
EIF3I
zf-rbx1
Beta-prop_NWD2_C
WDR55
Motif
Other DBs
NCBI-GeneID:
134858994
NCBI-ProteinID:
XP_063731323
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All DBs
Position
22:complement(3151858..3194200)
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AA seq
1398 aa
AA seq
DB search
MSESPDARSLLSASSQLNLMEIDAIDDKEFDIPQVDTPPTLESILNELEDEEEPFVLEDT
CVLNTDNMDAHSCDTSSLASSDSGDPAHLKRKRRTVDLNATVHGSVLRHSLLKGISAQIV
SAADKVDAGLPTAITVAGVIVVGTSHGLALVFDTNQALRLCLGTKATGAEFGAVSALSVN
HDCSRLLCGFAKGQITMWDLASGKLLRTITDAHPPGTAVLHVKFTDDPTLAVCNDSGGSV
FELAFRRVMGMRSCDSRCLFSGSKGEVCCIEPLRAPPDFRDHPITHYSLLAMASLTKILV
IGLKPSLKVWMTFPYSKSDPSSVPQLAWQFVPVQKTVNPILAFCKGDTVHFLLVKKEDTG
TIHVIKQKQLQLSCDIISLSWINSRTLVLVDSHEKLQVVDRPSQEVLETLDLEQVQLVYN
SRHFKSLATGGNVSQALALVGEKACYQSVSSYAGQIVYLGTKSAHIMALRNWRERIDCLL
KQEHFVEALSLAWSFHEGTAKAVVGLGDPMKKKGVVGDKMVEILFQFAEHALKKCPEQGK
IQVMEQHFHDVVPVLVDYCLLLKRADLMFNQLYDRLVENSVAKGVFLEALESYIVADRLG
HLTTPIMRDLLAHYHSNGMMDSLERCIVHLDVTSLDIQQVVQVCWENQLYDAMLYVFNSG
MNDYITPMEKLFAVIGPPLREGRGLTDEEVVMGNKLLVYISCCLAGRAYPLGDIPEDLVV
QVKNQVFEFLIRRHSADLLEEEELFPFIRTLLHFDTREFLNVLAMTFEDFKNDKQALEYQ
QRVVDILLQVMVDNPDFTPSQVGGLFTFLARQLAKPDNTLFVNRKLFDQVLEFLCCPDDD
SRHTERQQVLLELLQVGGVVQFNEERLLTLAEKANFYQICEFLYEKQHLYDRIIDCYLRD
PLRKGEIFSYIHNLLSMPGYSAEEKQTVKVKVLQHIQELVTLDPSKSADLVLFNFTEEVQ
QIISELQDDQLLFRFLSCLLEPREGHISGTMLPRQRDLHELLLDLLCRFGPQQLLGFLQT
SQHYRLEEAIQTTQKYHHNEATAYLLEMKGDVHGAFAVLLETLKEKLSVLTAESERGDDR
GEQRDREHTLSRVKGSLNDIIELCHRSSDNLDQQQREVLWFPLLETMMASQKLVKGLNDE
HTFEVLKELTMKVLNCMSSFIPLPAIIQRILQDPVYGRGKLAEIQGLILGMLDTFNYEQT
LLETTTSLLNHDLHWSLAHLRAAVTRGLHPRQDHCNICLQQYKRRQDSAEEIIVFSCGHL
YHYQCLQQKACGGGVPSELNQRWSCYKCSSSQGGRGGTATELKRGRTTSLAQTRVTSVHH
DGGAEANGKKVYVEAMLDSQQEQSWDQLRSMYRGPSRLSILAELSQCQSNEKTGLLMPAQ
PGTESFQLKLSPPPLIEE
NT seq
4197 nt
NT seq
+upstream
nt +downstream
nt
atgtcggagtctccggacgcccgcagcctcctgtcggcctcctcacagctcaacctgatg
gagatagacgcgatcgatgataaagagtttgacattccccaagttgacacacctcccaca
ctggagagcatcctgaatgagctggaggatgaggaggagccgtttgtgttggaggacacc
tgcgtgctcaacacagacaacatggacgctcactcctgtgacacttcctctctggccagc
tctgacagtggagacccagcacacctcaaacggaagaggaggacagtggacctgaacgcc
acggtacacgggtctgttctccgacacagcctgctgaagggcatctccgcacagattgtc
tctgctgctgacaaagtggatgctggcctgccaacagctataacagtggcgggagtcatt
gtggtaggaacgtctcatggtctggctctggtcttcgataccaatcaggctctgcggctg
tgtctgggtaccaaggcaacgggggcagagtttggagctgtctctgctctgagcgtcaac
cacgactgctcacgacttctctgcggctttgccaaaggacagatcacaatgtgggatcta
gccagtgggaagctcctgagaacaatcactgatgcccaccctccaggaacagcagtactg
cacgtgaagttcacagatgacccgactcttgcagtgtgcaatgacagcggaggatcagtg
tttgagctggctttcaggagggtgatggggatgcgctcctgtgactctcgctgtctcttc
agtgggtctaaaggggaggtgtgctgtattgagccgctgcgtgcccccccagacttcaga
gaccatcccatcacacactactctctgttggccatggcctccctcactaagattctggtc
attggactgaagccctcgctgaaagtctggatgactttcccctacagcaagtccgacccg
tccagcgttcctcagctggcctggcagtttgttcctgttcagaagacggtcaaccccatc
ctggctttctgtaaaggagacacagtccacttcctgctggtaaagaaggaggacacaggg
accatccatgtcatcaagcagaaacaactccagctcagctgtgacatcatcagcctgagt
tggattaacagccgtaccctggtccttgtggacagccatgaaaagctgcaggtcgtggac
cggcccagtcaggaggttctggagactctggacctggagcaggtgcaactggtctataac
agccgacatttcaaatcgctggccactggagggaatgtctcccaggctctggccttagtg
ggagagaaggcctgctaccagtctgtctccagctacgcaggacagattgtctatttgggt
accaagtccgctcacatcatggctctgaggaattggagggagcgcatcgactgcctactg
aagcaggagcatttcgtggaggctctctctctggcctggtccttccatgagggaactgcc
aaagctgtggttggtctcggagatccaatgaaaaagaagggagtggtaggggacaagatg
gtggagatcctcttccagtttgcagagcatgctctgaagaagtgtccagagcaaggcaag
atacaagtgatggagcaacacttccacgatgtggttccagtcctggtggattactgcctg
ctgctgaagagagcagacctgatgttcaaccagctgtacgaccggctggtggagaactcg
gttgctaagggcgtcttcctggaggcgctagagtcgtacattgtcgccgaccgcctcggt
cacctcaccacgcctatcatgagagacctcctggcccattaccatagcaacggtatgatg
gacagcctggagagatgcattgtccatctggatgtgaccagcctggacatacagcaggtg
gttcaagtatgttgggagaaccagctctatgatgcaatgctctacgtcttcaacagcggc
atgaatgactacatcacccctatggagaaactttttgcagtgattggcccaccacttaga
gaggggagaggcctcacagatgaagaagtggtgatgggaaacaagctgttggtgtacatc
agctgctgtcttgcaggcagggcgtatccactaggagacatccctgaagacctggtggtt
caggtcaagaaccaggtgtttgagtttcttatccgtcggcattcggctgacttgttagaa
gaggaggagctctttccatttatccgtactctcctccactttgatacccgggagttcctc
aatgtcctcgccatgacattcgaggactttaagaatgataagcaggccctcgagtaccag
cagagggtagtggacatcctactccaggtgatggtggacaacccagacttcactccctcc
caggtgggcgggctcttcacgtttttggctcgtcagttggccaaaccagacaacacgctg
tttgtgaacaggaagctctttgatcaggtgctggagttcctgtgttgccctgatgatgac
tctcgacacactgagaggcagcaggttctgctggagctgctacaggtcgggggggtggtc
cagtttaatgaagaaaggctgctgacattggcagagaaagccaatttctaccaaatctgt
gaatttctctacgagaaacaacatctgtacgaccggatcatcgactgctacctgagagac
cccctcaggaagggggagatcttcagctacatccacaatctgctgtccatgcccggctac
agcgctgaggagaaacagacggtgaaggtcaaagtgctgcaacacatacaggagctggtg
acccttgaccccagtaagtcagcggacctggtgctgtttaacttcactgaagaggtgcag
caaatcatctctgagcttcaggatgaccagttactcttcaggttcctcagctgcctcctg
gagccacgggagggccatatctcagggaccatgctgcctcggcagagggacctccatgag
ctcctgctggacttactgtgtcgcttcggcccccagcagctcctgggcttcctgcagacc
tcccagcactacaggctggaggaggccatacagacaactcagaagtaccaccacaatgag
gccacagcctacctgctggagatgaagggagatgttcatggagcctttgctgtcctgtta
gagactctgaaggagaaactcagtgtcctcactgctgagagtgagagaggggatgacaga
ggggagcaaagagacagggaacacacactgagcagagtgaaggggtccctgaacgacatc
atagagctgtgccatcggagctctgacaacctggatcagcaacagagagaggtcttgtgg
tttccacttctggagaccatgatggcctctcaaaaactagtgaaggggcttaatgacgaa
cacacgtttgaggtcttgaaggagctaaccatgaaggttctcaactgtatgagcagcttt
attcctctgccggccatcatccagcggatactgcaggacccggtctacgggagaggaaag
ctggcagagatccagggcctcatcctgggtatgctggacacctttaactatgaacagact
cttcttgaaaccaccaccagtctgctgaaccatgacctccattggtccctcgctcacctt
cgcgccgccgttaccagggggctgcacccccgacaggaccactgtaacatctgcctgcag
cagtacaagaggaggcaggactctgcggaggagatcatcgtgttcagctgcggccacctg
taccactaccagtgcctgcagcagaaggcctgtggggggggcgtcccctcggagctgaac
cagcgctggagctgctacaagtgttcctccagccagggggggaggggggggactgcaacc
gaactgaagagaggccgcaccacgtccctggcacagactcgtgttacgtctgtgcatcat
gacggaggagcagaggctaacgggaagaaggtgtatgttgaagccatgctggactctcag
caggaacagtcctgggatcagctgcgctctatgtacagaggaccgtccaggttgtccatc
cttgcagaactctcacaatgccaaagcaacgaaaagacagggcttctgatgccggcccaa
cccggaacagagagtttccaactgaagctctctcctccacccttaatagaagagtag
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integrated database retrieval system
