Eleginops maclovinus (Patagonian blennie): 134859585
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Entry
134859585 CDS
T09869
Name
(RefSeq) nuclear cap-binding protein subunit 1
KO
K12882
nuclear cap-binding protein subunit 1
Organism
emac
Eleginops maclovinus (Patagonian blennie)
Pathway
emac03013
Nucleocytoplasmic transport
emac03015
mRNA surveillance pathway
emac03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
emac00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
134859585
09122 Translation
03013 Nucleocytoplasmic transport
134859585
03015 mRNA surveillance pathway
134859585
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
emac03019
]
134859585
03041 Spliceosome [BR:
emac03041
]
134859585
Messenger RNA biogenesis [BR:
emac03019
]
Eukaryotic type
mRNA processing factors
5' end processing
Cap binding complex
134859585
Spliceosome [BR:
emac03041
]
Common components
Common spliceosomal components
Cap binding complex
134859585
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
MIF4G_like_2
MIF4G_like
MIF4G
RRN3
WIT1_2_N
DUF1690
Vfa1
AAA_11
FapA
CCDC89
FANCI_S4
Exonuc_VII_L
GBP_C
PHM7_cyt
EMC3_TMCO1
tRNA_bind_2
Motif
Other DBs
NCBI-GeneID:
134859585
NCBI-ProteinID:
XP_063732205
LinkDB
All DBs
Position
23:complement(3482791..3490003)
Genome browser
AA seq
797 aa
AA seq
DB search
MSRRRHSESENDGGQAHKRRRTSEPIEIEDRLESLICRVGEKSTSSLESNLEGLAGVLEA
DLPNYKNKILRILCAVARLLPEKLTVYTTLVGLLNARNYNFGGEFVEAMIRQLKETLKNN
LYNEAVYLVRFLSDLVNCHVIAAPSMVAMFENFISVTQEEDVPQVRADWFVYVVLSCLPW
VGKELYEKKDVEMDRLLSQIEGFLKRRVKTHVPMLQVWTAEKPHLQEEYLDCLWAQIQKL
KKDRWQERHILRPYIAFDSVLCEALQHNLPPFTPPGHMPDAQYPMPRVVFRMFDYTDAPE
GPVMPGSHSVERFVIEENLHCIIKTHWKERKTCAAQLLSYPGKNKIPLNYHIVEVIFGEL
FQLPAAPHIDVMYTTLLIELCKLQPGSLPQVLAQATEMLFMRLDTMNTSCIDRLINWFSH
HLSNFQFRWSWDDWSDCLTMDLEKPKPKFIKEVLEKCMRLSYHQRIVDIVPASFSALIPA
ENIFVYKYEDESSSSLPGYPASITVGNAIKNRATNEEIMAILKEVPNPNQEDDDDEGESF
NPLKVDVFLQTLLHLAAKSFSHSFSALGKFHEILKALTENDEGKLHILKVVYEAWKNHPQ
MVAVLVDKMVRTQIVDCAAVANWLFSQDMAHEFTRLFVWEILHSTIRKMDKHVQKIQQEL
EEAKDKLEKQQHKHKRDSGDEEDMEKNSEDEEGQLEEQIERLQEKVESAQSEQKNLFLVI
FQRFIMLLTEHLVRCETGSVDISTPWYKNCIERLQQVFLMHHVTIQQYMGTLENLLFTAE
LDPHILAVYQQFCALQL
NT seq
2394 nt
NT seq
+upstream
nt +downstream
nt
atgtccaggagacgacacagcgagagcgagaatgacggaggtcaggcacataaaaggagg
agaacgtcggagcccattgaaatagaagaccgcctggagtcactgatatgtcgtgtcggg
gagaagagtacttcgtccctcgagagcaacttggaggggcttgcaggtgtcctggaagcc
gaccttccaaactacaaaaacaaaatcctgcgtattttatgtgctgtcgcccgcctcctc
cctgagaagctgaccgtgtacacgactctggtcggcctcctgaatgccaggaactacaac
tttgggggcgagtttgtggaggccatgatcagacaactcaaggagactctgaagaacaac
ctgtacaatgaagctgtttatctggtgcgttttctgtctgacttggtcaactgccatgtg
atcgcggctccttcaatggtggccatgttcgaaaactttatcagtgttactcaagaggaa
gatgtaccacaggtccgggccgactggtttgtgtacgtggttctttcctgtctgccctgg
gtggggaaggagctctacgagaagaaagacgtcgagatggaccgactcctcagccagatc
gaaggcttcctcaagcggcgagtaaagactcacgtccccatgctgcaggtgtggacagca
gagaagccacacctacaagaggagtacctggactgcctgtgggctcagatccagaagctg
aagaaggaccgctggcaggagcgccacatcctgcgtccgtacatcgccttcgacagcgtg
ctgtgtgaggcccttcagcacaacctgcccccctttacccctccgggacacatgcccgac
gcccagtaccccatgccccgggtggtcttccgcatgtttgactacaccgacgccccagag
ggccccgtcatgcccggcagccattctgtggagagattcgtcatcgaggagaacctgcac
tgcatcatcaagactcattggaaggagaggaaaacatgtgccgcccagttactcagctat
ccagggaaaaataagatcccgctcaactatcacatcgtggaggtgatcttcggagaactg
ttccagctgccggcggctcctcacatcgacgtcatgtacaccacgctgctcatcgagctg
tgcaagctgcagcccggctccctgcctcaagtcttggcccaagccacagagatgctgttc
atgaggctggacaccatgaacaccagctgcatagaccgactaatcaactggttttctcat
catttgagcaacttccagtttcggtggagctgggatgactggtctgactgtctgaccatg
gatctagaaaagcccaagcccaagttcatcaaagaagttctggagaagtgtatgagactc
tcctaccatcagcggatcgtggacatcgtccctgcgtccttctccgctctcatccccgct
gaaaacatctttgtatacaaatacgaagatgagagcagctcttcgttaccaggttaccca
gcatccatcactgtgggaaacgccatcaagaaccgagcgaccaacgaggagatcatggcc
atcctcaaagaagtgcccaaccccaaccaggaggacgacgacgatgagggcgagagcttc
aaccctctgaaggtggatgtgttcctgcagactctgctccacctggcagccaaatccttc
agccactccttcagcgccctcggaaagttccatgagatcctgaaggccctgacggagaac
gacgaggggaagctgcacatcctcaaagtggtttatgaagcgtggaagaatcacccacag
atggtcgccgtgttggtggataaaatggtccggacgcagattgtggactgcgctgccgtg
gcaaactggctgttctctcaggacatggcccacgagttcaccaggctttttgtctgggag
attctgcactcgaccatcaggaagatggacaaacacgtgcagaagatccagcaggagtta
gaggaggccaaggacaaactggagaaacagcagcacaagcataagagggacagcggggac
gaggaggacatggaaaagaacagcgaggatgaggaggggcagctggaggagcaaatcgag
aggctgcaggagaaggtggagtcggctcagagcgagcagaagaacctcttccttgtcatc
ttccagcgcttcatcatgctgctgacggagcacctggtccgctgtgagacaggcagcgtg
gacatcagcacgccgtggtacaagaactgcatcgagagactgcagcaggtcttcctcatg
caccacgtgaccatccagcagtacatggggactctggagaacctgctgttcaccgcagag
ctcgacccccacatcctggctgtgtaccagcagttctgcgccctgcagctttga
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