Eleginops maclovinus (Patagonian blennie): 134859850
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Entry
134859850 CDS
T09869
Symbol
pcdh20
Name
(RefSeq) protocadherin-20
KO
K16498
protocadherin delta 1
Organism
emac
Eleginops maclovinus (Patagonian blennie)
Pathway
emac03273
Virion - Lassa virus and SFTS virus
Brite
KEGG Orthology (KO) [BR:
emac00001
]
09120 Genetic Information Processing
09125 Information processing in viruses
03273 Virion - Lassa virus and SFTS virus
134859850 (pcdh20)
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
emac01009
]
134859850 (pcdh20)
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
emac04515
]
134859850 (pcdh20)
Protein phosphatases and associated proteins [BR:
emac01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-1
PP1-interacting proteins (PIPs)
134859850 (pcdh20)
Cell adhesion molecules [BR:
emac04515
]
Cadherins
Protocadherins
134859850 (pcdh20)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Cadherin
Cadherin_2
Cadherin_CELSR2_9th
DUF4193
Motif
Other DBs
NCBI-GeneID:
134859850
NCBI-ProteinID:
XP_063732657
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All DBs
Position
23:complement(16383263..16388624)
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AA seq
860 aa
AA seq
DB search
MACVKAMGNRTAGLSWAVLMQILLVVDNLQQTICGSVRFSIQEEQGPGVLVGSLSEHFPP
PYQLLTEKYLWMDKKNGNLYTTEEKIDREALFPEDTKTEECIILHNSVVGPSGDLIQFSV
IIEDINDNAPHFENSEIHLKISEDVSVGTSFLLDDQALDRDAGYNSEVYYQLEDSDGFFS
LTVEDGSVIVLVVLTALDRETRDMYQMALVATDRGSGPLSATATLIVTVTDVNDNCPSFS
PDSPRSVTIPGDSQMNMLVAQVRATDPDSGLNAAIVYSLSPKVSKRAKKLLSLDSLTGSI
RLTQDLQSDSSEELLLKVLASGHHCPPADTQVTVSVLPKANQELAIKIGFIVEHRNETMV
LPENQPPTVLAVLELEGDSSFKGSSVAIENKVHFTLNPQNGKYLLSTSEALDYEMKREHH
IIVVVHGKSDKGSVITHSRRAIRVLVADVNDNAPIFLQSHYHVEVEENNQPGMSLLKILA
NDADSGYNGRVTYRMDKHTSSIFNTDPNTGQLSVSAILDREQQDAHKFTVFAQDSGSPPL
ESAATVSIQVLDRNDNAPIFLIPHYIFFIPENVPPFTLVGRVRVRDPDEGSNGNTEFHVV
NSSGPFVVDNTLGTLRTTTKLDHETHNRYELYLLASDHGHPVALTSTARVTIFVEDINDN
QPEVILPSSNSSCQTVSLATVTGTIVTKIFAIDADSGLNSEITYTVVDPDPVQNTSPFRV
DSRSGNITVVQQLLQKDLGMHYLFILVSDGGKPASLYTTVWVNLLVNESVGPCHLDRKPT
WSGTADLVQTPRKAPICEAVDTRSAKLTLLVGLGMMLVSTCCFLATAVLYLKQRRLSFHH
KNGGHIEEKVISLSLKDKYY
NT seq
2583 nt
NT seq
+upstream
nt +downstream
nt
atggcatgtgtgaaggcgatgggcaataggactgctggtttgagctgggctgtactaatg
cagattctgctggtggtggacaatctgcagcagacaatatgtggttctgtccggttttcc
atccaagaggaacaggggcctggtgttctggtggggtcacttagtgaacactttccacct
ccgtaccagctcctgaccgagaagtatctgtggatggacaaaaaaaacgggaatttgtac
actactgaggaaaagattgatcgtgaggccctcttccctgaggatacaaaaacggaagaa
tgcattattttacacaattctgtcgtggggccctcaggagaccttatacagttctctgtg
atcatagaggacatcaatgacaacgcacctcattttgaaaacagcgaaatacatttgaaa
atatctgaggacgtgtctgtggggacgagtttcttattggatgaccaggctctggacagg
gatgctggatataatagcgaggtgtattaccagctagaagattctgatggattttttagt
ttaacagtagaagatgggtctgtcatcgtgctggttgtgttaacagctctggatagggag
acccgagacatgtatcagatggcgctggtggccactgaccgtggctcaggccctttaagt
gctacagcaactttaatagtcacagtgacagatgttaatgacaactgtccaagctttagc
ccggacagcccccgcagcgtcaccatccccggagactcccagatgaacatgctggttgct
caggtcagggccacagacccagattcaggcttgaatgctgccattgtttactccctcagt
cccaaagtctcaaagcgggccaagaagctcttaagccttgacagcctcactgggtctatc
agactaacacaggacctccagagtgacagctccgaggagctgctgttgaaagtgttagct
agcggccatcactgccccccagcagacactcaggtaactgtatccgtgctccccaaggcc
aaccaagagctggcgatcaagatcgggttcatagtggagcatcgaaacgagactatggtg
ttaccagagaaccaaccccccactgtcttagctgttttagagcttgagggtgacagcagc
tttaaaggctcatctgtagctattgagaacaaggtacatttcactctgaacccacagaat
ggcaaatatctcctttccacatcagaggccctagactatgagatgaaaagagagcatcat
attattgtggtagttcatggaaaatcagataaaggatctgtgatcactcattccaggcgt
gcgatcagggtgttggtggcagatgtcaatgataatgctccaattttcctccagtctcac
taccatgttgaggtggaagaaaacaaccagccagggatgtcactgctgaagatcttggca
aatgatgcagacagtggatacaatggcagggtgacctacaggatggacaaacacacatct
tccatctttaacactgaccccaatacaggtcagctctctgtgtcagccattctggacagg
gagcagcaggatgcacataaattcaccgtgtttgcacaagatagtggctctcctcccttg
gagtcagcagccacagtatctattcaagtgctggaccggaatgacaatgcacccattttt
ctaatccctcattacatctttttcatccctgagaatgtaccaccgtttacccttgtgggg
agggttagggtgagagacccagacgaaggatcgaatgggaacacagagttccatgttgtg
aacagcagtggaccttttgttgtggataacacccttgggacactgcgcaccaccaccaag
ttggaccacgagacgcacaaccgctatgaactctacctgctggctagcgatcatgggcac
cctgtcgctttgacttccactgccagggtaactatctttgtggaggatatcaatgacaac
cagccagaagttatccttccaagcagcaactcctcctgccagactgtctctctagcgacc
gttacaggcaccattgtaacaaagatctttgccattgatgcggactcagggctcaattcg
gagattacatacactgtagtggacccagacccagtgcaaaacaccagtcccttccgagtg
gattcgaggtcaggaaacattactgtagtccagcaactccttcagaaagacctgggaatg
cattacctgttcattttggttagtgatggggggaagccagcttccctttataccactgtc
tgggttaatctgttggtcaacgagagcgtggggccttgccacttggaccggaagccgacc
tggtcagggacagctgacttggttcaaaccccccgaaaggcccccatctgtgaggcagtt
gacaccagatctgctaagctgactctgttggtaggccttggtatgatgctggtgtccaca
tgctgttttctggcaactgctgttttatacctgaagcagaggagactaagttttcatcat
aaaaatggggggcacattgaggagaaggtgatttcactcagccttaaagacaaatattac
taa
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