Eleginops maclovinus (Patagonian blennie): 134859988
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Entry
134859988 CDS
T09869
Symbol
rbm22
Name
(RefSeq) pre-mRNA-splicing factor RBM22
KO
K12872
pre-mRNA-splicing factor RBM22/SLT11
Organism
emac
Eleginops maclovinus (Patagonian blennie)
Pathway
emac03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
emac00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
134859988 (rbm22)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
emac03041
]
134859988 (rbm22)
Spliceosome [BR:
emac03041
]
Complex B
Other components
Prp19-related factors
134859988 (rbm22)
Complex C
134859988 (rbm22)
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SSDB
Ortholog
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Gene cluster
GFIT
Motif
Pfam:
STL11_N
zf-CCCH_RBM22
RRM_1
zf_CCCH_4
Torus
RRM_occluded
Nup35_RRM_2
zf-CCCH_2
zf-CCCH
RRM_3
zf-CCCH_4
RRM_YTH1
zf-CCCH_12
zf-CCCH_10
zf-CCCH_PARP12
Motif
Other DBs
NCBI-GeneID:
134859988
NCBI-ProteinID:
XP_063732877
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Position
23:14723074..14728073
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AA seq
427 aa
AA seq
DB search
MATSLGSNTYNRQNWEDADFPILCQTCLGENPYIRMTKEKYGKECKICARPFTVFRWCPG
TRMRFKKTEVCQTCSKMKNVCQTCLLDLEFGLPIQVRDTGLSVKDEVPKSDVNKEYYTQN
MEREIANSDGTRPVGQLGKAPSSSDMLLKLARTTPYYKRNRPHICSFWVKGECKRGEECP
YRHEKPTDPDDPLADQNIKDRYYGINDPVADKLLKRASTMPRLDPPDDKSISTLYIGGLG
DTVTDGDLKSHFYQFGEIRTITIVQRQQCAFIQFATRQSAEMAAEKSFNKLIINGRRLTV
KWGRSQAARGKEGVKEGVSEMGTRLDPVPGLPGALPPPPALDEEAPANYFNLDPSSSPAV
MNIALPPPPGINPPPPGFGPPMFHPMSHMGPPMPPPMSMRPPGQIHYPSQDPQRMGAHAA
HGARHGE
NT seq
1284 nt
NT seq
+upstream
nt +downstream
nt
atggcgacgtctctaggatccaacacctacaacagacagaactgggaagacgcggatttt
ccaattctgtgtcagacatgtttaggagaaaatccatatatccgcatgaccaaggagaaa
tatgggaaagagtgcaagatttgtgctcgtcctttcacggtgttccgatggtgcccgggg
acacgtatgcgttttaaaaagactgaggtctgtcagacttgcagtaaaatgaagaatgtt
tgtcaaacatgtctgctggacctggagtttggtttgcctattcaggtcagagacactggg
ctgtcagttaaagacgaggttcctaagtcggatgtcaacaaagagtactacacacagaac
atggagagagagatagccaattctgatggcacacggccagtgggccagctgggtaaagcg
cccagctctagtgatatgctgctgaaactggccaggaccacgccgtactacaagaggaac
cggccgcacatctgctccttctgggtgaagggagagtgtaagagaggggaggaatgtccc
tacagacacgagaagcccactgatcctgatgaccctctggccgaccagaacatcaaggac
cgttactacggcatcaatgatccagtggctgacaagctgctaaaacgggcctcaactatg
ccgcgtcttgacccaccagatgacaagtccatcagcaccctctacatcgggggtttggga
gatactgtcactgatggagatctcaagagtcacttttaccagtttggagagattcgcacc
atcaccatagtccagaggcagcagtgtgccttcatccagtttgccacccggcagtcagct
gaaatggctgctgagaagtccttcaacaaactcatcattaatggacggaggctcactgtc
aagtggggaaggtctcaggcagcaagagggaaggagggtgtcaaagagggtgtcagtgag
atgggcaccagactcgaccctgtacctggtctgcctggagctcttcctccacctccagct
ttagacgaagaagctcctgcaaactacttcaacctcgaccctagcagctctcctgcggtc
atgaacatcgctctgcccccccctccaggcatcaacccgcctcctccaggttttggccct
ccaatgttccaccctatgagtcacatgggtccacctatgccccctccaatgagcatgaga
cctcctggtcaaatccactacccctcccaggatcctcagcgcatgggggcccatgctgca
catggcgcacgtcacggcgaatag
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