Eleginops maclovinus (Patagonian blennie): 134860173
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Entry
134860173 CDS
T09869
Symbol
upf3b
Name
(RefSeq) regulator of nonsense transcripts 3B
KO
K14328
regulator of nonsense transcripts 3
Organism
emac
Eleginops maclovinus (Patagonian blennie)
Pathway
emac03013
Nucleocytoplasmic transport
emac03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
emac00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
134860173 (upf3b)
03015 mRNA surveillance pathway
134860173 (upf3b)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
emac03019
]
134860173 (upf3b)
Messenger RNA biogenesis [BR:
emac03019
]
Eukaryotic type
mRNA surveillance and transport factors
Surveillance factors
Surveillance complex
134860173 (upf3b)
mRNA cycle factors
P-body specific factors
134860173 (upf3b)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Smg4_UPF3
RRM_1
Motif
Other DBs
NCBI-GeneID:
134860173
NCBI-ProteinID:
XP_063733095
LinkDB
All DBs
Position
23:complement(9577684..9581789)
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AA seq
463 aa
AA seq
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MKEDKENARPKDRRLEIKCEDGEKMERSKEKKEAMTKIVIRRLPPSLTKEELEEQLQPLP
EMDYLEFFSNDTSLFPHLFARAYINFKHQEDIVLFRDRFDGYVFIDSRGQEYPAVVEFAP
FQKTSKKRSKKRDAKCGTIADDPDYNKFLEFYNGDDDKLASTPETLLEEIEAKSKELVAK
KTTPLLDFLKNKQRIREEKKEERRRRELERKRLRDEERRKWREEERRKRKETDKMKRLDK
PLEKDKDQVKEEPKIKLLKKPDRGENADSEKPKEKAKKPERPNKEDRPMGGADHKRRQHI
DNKEDRGRKGEEDGRKEFREREPDRDRERDREREKERRQREKERIRRQDEDRRRRRERQD
GENNFRKEKREEEGKKDKERVFERKKGDHTGESTRSERPERSAKDHKKEESLKRDRLRNK
DRPAIQLYQPGARSRNRGGGAESNSADRKPDTETEKVADKGED
NT seq
1392 nt
NT seq
+upstream
nt +downstream
nt
atgaaggaagataaggaaaacgctagaccgaaggacagaagactggaaataaagtgtgaa
gatggagaaaaaatggagaggtccaaggaaaagaaagaggccatgacaaagattgtgatc
agacgattaccaccaagcctgaccaaggaggagctggaggagcagttacaacctctccca
gagatggactacctggagtttttctccaacgacaccagccttttcccacacctctttgca
agggcttacataaacttcaagcaccaagaggatatagttctcttcagagatcgatttgat
ggttatgtgttcattgacagcagaggacaggagtatcccgccgttgtggagtttgcacct
tttcaaaagacttccaagaaaagaagcaagaaaagggatgcaaaatgtggaacaattgct
gacgatcctgattacaataagtttcttgaattttacaacggcgatgatgacaagttggca
tcaacacctgagaccctgttggaagagattgaggccaaatcaaaggaacttgttgccaaa
aaaacaacacctctgctggacttcctgaagaataaacagagaatcagggaggaaaagaaa
gaagagagaagaaggagggagcttgaacgcaagcgtctgcgtgatgaggagcgtcgcaag
tggagggaggaggagagaaggaagcgcaaagagaccgataagatgaagagacttgacaaa
ccgcttgagaaagacaaggaccaagtgaaagaagaaccaaagattaagctcctgaagaag
ccagacagaggtgaaaatgctgattctgagaagcccaaggaaaaagccaagaaaccagag
aggccaaataaagaggacagacccatgggaggtgctgatcataagaggcgtcagcacatt
gataataaggaggatcgaggaaggaaaggtgaggaagacgggaggaaagagttccgggag
cgcgaaccagaccgagacagagagcgcgatcgagagcgggagaaggagcgccgacagagg
gaaaaggaacgcatcaggcgacaggacgaagaccgccggagaaggagagagcggcaggat
ggagagaacaatttcaggaaggagaagagggaggaggagggtaaaaaagataaagagcgg
gtctttgagaggaagaagggagatcacactggagagtccactcgctctgagaggccagag
aggtctgccaaagaccacaagaaggaggagagcttgaaaagagatcggctacgaaacaag
gaccgacctgcgattcagctgtatcagccaggggccagaagccgtaatcgaggcggagga
gccgaatccaactctgcagacaggaagccagacaccgaaacagagaaagtggctgacaaa
ggagaagattga
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