| Entry |
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| Symbol |
upf3b
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| Name |
(RefSeq) regulator of nonsense transcripts 3B
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| KO |
| K14328 | regulator of nonsense transcripts 3 |
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| Organism |
emac Eleginops maclovinus (Patagonian blennie)
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| Pathway |
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| Brite |
KEGG Orthology (KO) [BR:emac00001]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
134860173 (upf3b)
03015 mRNA surveillance pathway
134860173 (upf3b)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:emac03019]
134860173 (upf3b)
Messenger RNA biogenesis [BR:emac03019]
Eukaryotic type
mRNA surveillance and transport factors
Surveillance factors
Surveillance complex
134860173 (upf3b)
mRNA cycle factors
P-body specific factors
134860173 (upf3b)
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| SSDB |
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| Motif |
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| Other DBs |
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| LinkDB |
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| Position |
23:complement(9577684..9581789)
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| AA seq |
463 aa
MKEDKENARPKDRRLEIKCEDGEKMERSKEKKEAMTKIVIRRLPPSLTKEELEEQLQPLP
EMDYLEFFSNDTSLFPHLFARAYINFKHQEDIVLFRDRFDGYVFIDSRGQEYPAVVEFAP
FQKTSKKRSKKRDAKCGTIADDPDYNKFLEFYNGDDDKLASTPETLLEEIEAKSKELVAK
KTTPLLDFLKNKQRIREEKKEERRRRELERKRLRDEERRKWREEERRKRKETDKMKRLDK
PLEKDKDQVKEEPKIKLLKKPDRGENADSEKPKEKAKKPERPNKEDRPMGGADHKRRQHI
DNKEDRGRKGEEDGRKEFREREPDRDRERDREREKERRQREKERIRRQDEDRRRRRERQD
GENNFRKEKREEEGKKDKERVFERKKGDHTGESTRSERPERSAKDHKKEESLKRDRLRNK
DRPAIQLYQPGARSRNRGGGAESNSADRKPDTETEKVADKGED |
|---|
| NT seq |
1392 nt +upstreamnt +downstreamnt
atgaaggaagataaggaaaacgctagaccgaaggacagaagactggaaataaagtgtgaa
gatggagaaaaaatggagaggtccaaggaaaagaaagaggccatgacaaagattgtgatc
agacgattaccaccaagcctgaccaaggaggagctggaggagcagttacaacctctccca
gagatggactacctggagtttttctccaacgacaccagccttttcccacacctctttgca
agggcttacataaacttcaagcaccaagaggatatagttctcttcagagatcgatttgat
ggttatgtgttcattgacagcagaggacaggagtatcccgccgttgtggagtttgcacct
tttcaaaagacttccaagaaaagaagcaagaaaagggatgcaaaatgtggaacaattgct
gacgatcctgattacaataagtttcttgaattttacaacggcgatgatgacaagttggca
tcaacacctgagaccctgttggaagagattgaggccaaatcaaaggaacttgttgccaaa
aaaacaacacctctgctggacttcctgaagaataaacagagaatcagggaggaaaagaaa
gaagagagaagaaggagggagcttgaacgcaagcgtctgcgtgatgaggagcgtcgcaag
tggagggaggaggagagaaggaagcgcaaagagaccgataagatgaagagacttgacaaa
ccgcttgagaaagacaaggaccaagtgaaagaagaaccaaagattaagctcctgaagaag
ccagacagaggtgaaaatgctgattctgagaagcccaaggaaaaagccaagaaaccagag
aggccaaataaagaggacagacccatgggaggtgctgatcataagaggcgtcagcacatt
gataataaggaggatcgaggaaggaaaggtgaggaagacgggaggaaagagttccgggag
cgcgaaccagaccgagacagagagcgcgatcgagagcgggagaaggagcgccgacagagg
gaaaaggaacgcatcaggcgacaggacgaagaccgccggagaaggagagagcggcaggat
ggagagaacaatttcaggaaggagaagagggaggaggagggtaaaaaagataaagagcgg
gtctttgagaggaagaagggagatcacactggagagtccactcgctctgagaggccagag
aggtctgccaaagaccacaagaaggaggagagcttgaaaagagatcggctacgaaacaag
gaccgacctgcgattcagctgtatcagccaggggccagaagccgtaatcgaggcggagga
gccgaatccaactctgcagacaggaagccagacaccgaaacagagaaagtggctgacaaa
ggagaagattga |
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