Eleginops maclovinus (Patagonian blennie): 134860324
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Entry
134860324 CDS
T09869
Symbol
smc1b
Name
(RefSeq) structural maintenance of chromosomes protein 1B
KO
K06636
structural maintenance of chromosome 1
Organism
emac
Eleginops maclovinus (Patagonian blennie)
Pathway
emac04110
Cell cycle
emac04114
Oocyte meiosis
Brite
KEGG Orthology (KO) [BR:
emac00001
]
09140 Cellular Processes
09143 Cell growth and death
04110 Cell cycle
134860324 (smc1b)
04114 Oocyte meiosis
134860324 (smc1b)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
emac03036
]
134860324 (smc1b)
Chromosome and associated proteins [BR:
emac03036
]
Eukaryotic type
Sister chromatid cohesion proteins
Cohesin complex
134860324 (smc1b)
Meiosis-specific proteins
Cohesin complex and associated proteins
134860324 (smc1b)
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
SMC_N
SMC_hinge
AAA_21
AAA_23
AAA_29
Motif
Other DBs
NCBI-GeneID:
134860324
NCBI-ProteinID:
XP_063733346
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Position
2:4151777..4169199
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AA seq
1239 aa
AA seq
DB search
MGYLKQIDIENFKSWRGKKVIGPFMRFNCIIGTNGSGKSNVMDAISFAMGERATCLRVKH
LRELIHGAHIGRPVTDTARVSMRYCDEEDKETVFCRSIVGDSSEYRINGVHVSLAKYLEA
LEKIGIVTKARNCLVFQGAVESIALKDPKERTKMFECISHSKEYAAEYEQKKEALMKARE
DTQFHFNKKKSATVERKQMSLERIEAKRYQALVDEIDQNQLQLSLAELYHNLQGVRTFSD
TLTEKQQLAAAQSNKLLNAEQKFKTLKKEHGRLSREQQQMDKEIHAQEHTLSQCRAHYIK
AQVNTSHHMKKAMDLHAALRKIQKLIAIKEQELAEGQEEICELERTWRNYEKQTQEKAAA
LRKIIELDEDQFERYKELKGLTRKQGAVFTQKAEKLHWEVRAEREKMAFDQRRKKEVEAS
IRSNQTQLEDLTRRAEKLEAYSTSCTSSLEEFRQLEESMSAELQRGRQRSMEVNQELGKV
LEELGNARLDSQESRRMLRRKEMLDRLRRLYPETVFGRLSDLCSPTHKKYQLAVIKVFGH
FMNAIVVATEKVAQDCIFFIKEERAERETFLPLDYLDVNPLNERLREVPGAKLVVDVVQI
SNSIGAAQLKKVVQFVCGNALVCDTIKEAKSVAFGGRERLKTVALDGTLFSKSGTISGGS
SYLRTKARIWDEEDMLQLKERKYQLTAEMRDLMKLRRKESVLKEVIAQAQGCQTRLKYSK
TELDNIRKKDILRWQAEISRMESELANLDSQIQMQLASVEAKAAGMVMLRERVDQMEDHL
FSDFCAEIGIDSIRQYEQENLKYQTELDKKRLEFESQWTRLNAQLEYQRELLKQQKNKYR
KIEEAIDKEERTMAEQKKEMERLLVAVEESQSKHLELKNQLLAKKGQIAAAKAELDQKSQ
SLQGINKELVKLQREVMSAEAALEQKRLFRHNMLLGCKIQGLALVMLSGNLNDISGMQLD
TETESTSTMNTMSVYEREAQMIIDYSDLDADFRSLQTEEEVEAYMGMLKESIATLEGVLQ
RTTAPNLKALDKMREVKDKLQGVTNAFEASTRAARKCSQEFEQVKAKRLQLFTQCFEHVS
VVIDQIYKRICRNNSAQAILTAETPDEPYLGGINYNCVAPGKRFMSMDNLSGGEKAIAAL
ALVFAIHSFRPAPFFILDEVDAALDNTNIGKVTSFIREESRETLQIIVISLKEEFFSKSD
ALLGVYSDFDECMFSHILSLDLRPYPLVEDENGEVEEPA
NT seq
3720 nt
NT seq
+upstream
nt +downstream
nt
atgggctatctaaaacaaattgacattgaaaacttcaagtcatggcgagggaagaaagtt
atcggtccttttatgcgatttaattgtataatcgggacaaacggctctggtaaatccaat
gtgatggacgccataagtttcgccatgggggagcgggctacctgtctccgggtgaagcac
ctccgggagctgatacacggagcccacatcgggaggcctgtgaccgacacagccagagtc
tccatgcggtactgcgacgaagaggacaaggagaccgtgttctgcaggagtattgtcggg
gactcgtctgagtatcgcatcaatggtgtacatgtctctctggccaaatacttggaggcg
ctggagaaaatcggcattgtgaccaaagctcgaaactgtttggtgttccagggggcagtg
gagtccatcgctctgaaggacccaaaggagaggaccaagatgttcgagtgcatcagtcat
tctaaagagtatgctgcagagtatgaacagaagaaagaggcgctgatgaaggccagagag
gacactcagtttcactttaacaagaagaaatctgctactgtggagagaaaacagatgtcg
ctggaaagaatagaggctaaaagataccaggcactggtagacgagattgaccagaaccag
ctgcagctgagcctggcggagctctatcacaacttgcaaggagtccgcaccttcagcgac
accctgacggagaaacagcagttggcagccgctcagagcaataaactgctgaatgccgag
cagaagttcaaaaccttaaagaaggaacatggacgcctcagcagggagcagcagcagatg
gacaaggagatccacgcccaggagcataccctgtcccagtgtcgagctcactacatcaaa
gcccaggttaacacctcccatcacatgaagaaggccatggatctccacgctgctctgagg
aagattcagaaactgattgctatcaaagagcaggagctggcagagggacaggaggagatc
tgtgagctggagcgcacctggaggaactacgagaagcaaacccaggagaaagcagccgcc
ctgaggaaaatcatcgagctggacgaggatcagtttgagcgatacaaagagctgaagggg
ctcacccgcaagcagggagctgtctttacccagaaggcggagaagctgcactgggaggtc
agagcggaacgggagaagatggcgttcgaccagcgcaggaagaaggaagtggaggcttcc
atcaggagcaaccagactcagctggaggatctcacacgcagagcagagaagctcgaagca
tactccacgtcctgcacgtcatccctggaagagttccgtcagctggaggagagtatgagc
gcggagctgcagcgaggccggcagcgtagcatggaggtgaaccaggagctgggtaaggtg
ctggaggagctggggaacgcccgccttgacagccaggagagccggagaatgctgcgacgc
aaagagatgctggacaggctgcgcagactctaccctgagactgtgtttggtcgtctgtct
gacctgtgcagcccgactcataagaagtaccagctggccgtcatcaaggtgtttggacac
ttcatgaacgccatcgtagtggctacagagaaagtggcccaagactgcatctttttcatt
aaggaggagcgagctgaacgtgagaccttcctgcccctcgactacttggatgtgaatccc
ctgaatgagcggctgagggaggttcccggggcgaagttggtggtagacgttgttcagatt
agcaactctataggtgccgcccaactgaagaaggtggtgcagtttgtctgtggcaacgcg
ttggtgtgtgacacaatcaaagaagcaaagagtgtggccttcggcgggagggagcgcctc
aagacggtagctctggacgggacgttgttttcaaaatcaggcacgatctccggaggctcc
agttacctgcggaccaaagctcgtatttgggacgaggaggacatgctgcagctgaaggaa
cgcaaataccagctgacagcagagatgcgcgatttgatgaagctaaggcggaaggagtca
gtgctgaaggaggtcattgctcaggctcagggctgtcagactcgcctgaaatactccaaa
acggagctggataacattaggaagaaagacatccttagatggcaagcggagatttctcgt
atggagagtgagttagcaaacctggactctcagatccagatgcagctggcgagcgtggag
gcaaaggctgcagggatggtgatgctcagagagcgggtcgaccagatggaggaccatctg
ttttctgacttctgtgctgagattggaatagacagcatcagacagtacgagcaggagaac
ctgaaatatcagaccgagctcgacaagaaacgcctggagtttgagagtcagtggactcgc
ctgaacgcacagctggagtaccaacgagaactactgaagcagcagaagaacaagtaccgc
aaaatagaggaagccattgacaaggaggagagaaccatggccgagcagaagaaggagatg
gagaggctgctggttgcggtggaagagagtcagagcaaacatctggagctgaagaaccag
ctgctggccaagaagggccagatagccgctgccaaggctgagctggaccagaaaagccag
agcctccaagggatcaacaaggagttggtgaagctccagcgggaggtgatgtctgcagag
gcggccttggagcagaagcgtttgttcagacacaacatgctgctcggctgcaagatccag
ggtctggccctcgtcatgctgtcagggaacctcaacgacatcagcgggatgcagctggac
acagaaactgaaagcacttccaccatgaacaccatgagcgtctatgagagagaggcacag
atgatcatcgactactctgacctggacgcagattttaggagtctgcagacggaggaggag
gtggaggcgtacatggggatgctgaaggagtccatcgccactttagagggagttctgcag
cggaccactgcccccaacctcaaagccctggataagatgagggaggtgaaagacaagctg
caaggagtgacaaacgcatttgaagccagcacaagagcagccagaaaatgcagccaggag
tttgagcaagtaaaagcgaagcgcctgcagctcttcacgcagtgcttcgaacacgtgtct
gtcgtcatcgatcagatctataaaagaatctgcaggaacaacagcgcccaggccattctg
actgcagagactcctgacgagccgtacctcggcggcatcaactacaactgcgtggctccg
gggaaacgcttcatgtccatggacaacctgtcgggtggagaaaaggccatcgccgctctc
gctctcgtgttcgccatccacagtttccgccccgctccgttcttcatcttggacgaggtg
gatgcagcgctggacaatacgaacatcggcaaggtgacgagtttcatcagagaggaatcc
agagagaccttgcagatcatcgtcatctccctgaaggaggagttcttctccaagtctgac
gctttgctgggagtctattcagattttgatgaatgcatgttcagccacattctgtccctg
gacctgcggccctaccctctggttgaagatgaaaatggggaggtagaagaacctgcatga
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