Eleginops maclovinus (Patagonian blennie): 134860346
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Entry
134860346 CDS
T09869
Symbol
pcdh11
Name
(RefSeq) LOW QUALITY PROTEIN: protocadherin-11 X-linked
KO
K16498
protocadherin delta 1
Organism
emac
Eleginops maclovinus (Patagonian blennie)
Pathway
emac03273
Virion - Lassa virus and SFTS virus
Brite
KEGG Orthology (KO) [BR:
emac00001
]
09120 Genetic Information Processing
09125 Information processing in viruses
03273 Virion - Lassa virus and SFTS virus
134860346 (pcdh11)
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
emac01009
]
134860346 (pcdh11)
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
emac04515
]
134860346 (pcdh11)
Protein phosphatases and associated proteins [BR:
emac01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-1
PP1-interacting proteins (PIPs)
134860346 (pcdh11)
Cell adhesion molecules [BR:
emac04515
]
Cadherins
Protocadherins
134860346 (pcdh11)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Cadherin
Protocadherin
Cadherin_CELSR2_9th
Cadherin_2
TMEM154
DUF6249
Motif
Other DBs
NCBI-GeneID:
134860346
NCBI-ProteinID:
XP_063733367
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All DBs
Position
23:12304697..12435445
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AA seq
1266 aa
AA seq
DB search
MDLPSQVHVLVLLTCVVLLCRAQERDYTLKEEQPENVRIGNLRKDLDLNLDPNIRLSSPL
QFKPVYKTGDVPLVRVEANTGEIFTTSTRIDREKLCSGVFAEKRCYYEIEVAVLPDEIFR
LVKIRFLIEDVNDNAPLFQSTVINISXPENTAINTRYPVPSAFDPDVGINGIQHYELVKS
VSEFGLDIIETPEGDKWPQLIVQQNLDREQKDTFVMKIKVEDGGNPPKSSTAILQVTISD
VNDNRPVFKDSELEVSVPENAPTGTSVAQLHASDADLGSNAQIHFAFSNQISASTKRHFS
IDSSTGLITVRQPLDREVTPVHKLIVLASDGSSTPSRATVIVNVTDVNDNVPSIDTRYII
NLVNGTVLLSENAPLNTKIALITVTDKDADLYGKVACYTDHDVPFRLKPVFNDQFLLETA
APLDYETTREYAIKIVASDRGTPPLNTSAMVLIKIKDENDNAPIFPQPEIQLSIPENNDP
STQLIKISATDADSGHNAEIIYTLGPDAPDGFNIDRRSGILSVGKRLDREKQERYSFTVI
ARDNGSASLQSNVTVRLIVQDLNDNSPAFTHPEYNFYVPENLPLYGTVGLITVTDADAGD
NSVITLSVLNGKDNFIIDPQTGVIKPNITFDREQQSSYTFMVKAVDGGQPPSSSYAKVTI
NVVDVNDNRPVFVIPSSNYSYDLVRTTITPGAVVTRVFAIDNDTGMNAELQYSIISSIII
TSRVSPRGLFAIDKATGNITLQEKILAADQGLHRLVVKVKDLGQPESLHAIALIHLFVND
TVSNATFIQEQLRKSMETPLDRNIGDSEVTPQANGYVIVVIAIIAGTMTVILVIFVTALV
RCRQTPRHKVVQKGKQSGEWVSPNQDNRQIKKKKKRKKRSPKSLLLNFVTIDESKPDDST
HEHVNGTLDLPVELEEQTMGKYNWATTPTTFKPDSPDLAKHYKSASPQPTFQIKPETPVA
PKKHHVIQELPLDNTFVVGCDSLSKCSSTSSDPYSVSECSCQGGFKTTGQISTRQNLSQT
PEKSFNSPPPICPHKEACQLGKITSVNTQRRVTFHLPDGSQESCSDSGLGDPEPSSTAST
TQPLPLSFPQEEYYEQTSPNSRTEGDGNSDPESTIEVNLQKALAEASETCTQECLILGHS
DSCWMPPALAQFQGPGLNSPTSTPITTAITGTMPSFGFQQSCARGAKANMIGMGVMDGRH
TLGRSVPKKDELDKGINRPQFYNTLDRHCSKKEEPIKVIPLASFSSPGQQTPTGVGSSSF
LHEHQL
NT seq
3801 nt
NT seq
+upstream
nt +downstream
nt
atggacttaccaagtcaggttcatgtgctggtcttgctcacctgtgtggtcttgctatgc
cgggcccaggagcgggactacactctaaaggaggagcagccagagaatgttcgtatcggg
aacctgcgcaaggacttggacctcaacctggacccaaacatcaggctatcctcaccgctg
cagttcaagccagtgtacaagacaggtgacgtgcctttggtgagggtggaagccaacaca
ggggagatctttaccaccagtaccagaattgaccgggagaagctgtgctcaggagtcttc
gctgagaaacgctgctactatgagatcgaggtggccgttctgcctgatgagatcttccga
ttggtcaagatccgcttcctgattgaggatgtaaatgacaacgcaccacttttccagtcc
actgttataaacatctccnatccagagaacacagcaatcaacacccgatacccggtgccc
tcagcatttgaccctgatgtagggatcaatgggattcaacattatgaacttgtcaagagt
gtcagcgagtttggcttagacatcatagagactcctgaaggcgacaagtggccgcagcta
attgttcaacagaacctagatcgtgagcagaaggacaccttcgttatgaagataaaggta
gaggatggtggcaaccctcccaagtccagcactgccatcctacaagtcaccatctccgat
gttaatgataatcgtcccgtcttcaaagacagtgagctggaggtttcggtgccagagaat
gccccaacgggaacatcggttgctcagctgcatgcctcagatgcagaccttggttccaac
gcgcagatccacttcgccttcagcaaccagatctctgcttcaaccaaacgtcacttttcc
attgacagctcaacaggactgatcactgtgaggcagccactggacagggaggtgactcct
gttcacaaactcatcgtgcttgccagtgatggcagctctactccctccagagccacagtg
attgttaatgtaacagatgttaatgacaatgttccctccatagacactcgctacattatc
aacctggttaatgggactgttctgctatctgaaaatgcacctctcaatacaaaaatagcc
ctcatcactgttactgacaaggatgcagatctttatggcaaagtagcttgctacactgac
catgatgttccttttcggttgaagcctgtctttaatgatcaattcttactagagacagcc
gcccccctagattatgagacgactcgagaatatgcaattaagatagtggcctcggatagg
gggacgcctcctttgaacacttcagctatggttttaattaaaatcaaggatgagaatgac
aacgcacccatctttccccagccggaaatccaactttccataccggagaacaatgacccc
tctacacagttaataaaaatcagcgccactgacgcagacagcggacataatgctgagatt
atttatactcttggccctgatgcgcctgacgggtttaacatagacagacggtcaggaatt
ctctctgttggcaaacgactggacagagagaagcaggagaggtactcattcactgtcata
gcgagggacaatggctctgcgtccctgcagagcaatgtcaccgtcaggctaatcgtccag
gaccttaatgacaacagcccagcttttacacaccccgagtacaacttctatgtgcctgag
aacctgcctctctatggaactgtgggcttaatcacagtgacggatgcagatgcgggagat
aattctgttataaccctgtctgttttgaacggaaaagataatttcatcatcgacccccaa
accggtgttatcaaacccaatataacttttgatagagagcagcaaagctcctacactttt
atggttaaggcagttgacggagggcaacctccaagttcctcctacgccaaggtcactatc
aatgtagtcgatgtcaacgacaatcgccctgtgttcgtcatcccatcctccaattactcg
tatgacctagtgcgaaccaccataacccctggcgctgtggtcaccagagtgtttgccatt
gacaatgacacaggtatgaatgctgagctacagtacagcatcatcagcagcatcatcatc
acatctagggtctcccctcgaggtcttttcgccatcgacaaagcaacgggtaacataaca
ctgcaagagaaaatattggcagctgatcagggacttcataggctggtagtcaaggtcaaa
gatctaggtcagcctgagtcattacatgctattgcgcttattcacttgtttgtcaatgac
actgtgtcaaatgctacatttatccaagaacagctgaggaaaagtatggagacacctttg
gatcgtaacataggtgacagtgaggtaacacctcaagccaacggatatgttattgttgtc
atagcaatcatagcagggaccatgactgtcatcttggtgatatttgtgactgccttggtg
cgctgccgacagacacccagacataaagtggtacaaaagggcaagcagagtggcgagtgg
gtgtcacccaaccaagacaaccgtcagatcaagaagaagaagaaaagaaagaagcgatcc
ccaaagagcctcctcctgaactttgtgaccatagatgaatccaagcctgacgactccacc
catgagcatgttaatggtacacttgatctccctgtggagcttgaggagcaaaccatgggg
aagtacaactgggccactacgcctaccaccttcaaacccgacagcccagatttagccaaa
cattacaagtctgcgtcccctcagcctacatttcaaatcaaacctgagactccagtggcc
ccaaagaagcaccatgtgatccaggagctccccttggacaacacgttcgtggtgggctgt
gactcactctccaagtgctcatcgactagctccgacccgtacagtgtctcagagtgcagc
tgtcaggggggattcaagactacggggcaaatctccacccgacagaacctgagccagaca
ccggagaagtcttttaactcgccgccccccatttgtcctcataaggaggcctgtcaactt
ggcaagataacctctgtgaatacccagcgccgcgtgacgttccatcttccagacggttcc
caagagagttgcagtgacagcgggctgggagacccggagccaagcagcacggccagcacc
acccagccccttcccctcagtttcccccaggaggagtactatgagcaaacatcacctaac
agccgcaccgagggagatggaaactcagaccctgaatctaccatcgaggtgaacctacaa
aaagccttggctgaggcctctgagacctgtacccaggagtgtctgatactgggccactct
gacagctgctggatgcccccagccctggcccagttccagggtcctggcctaaacagcccc
acctctacccccatcaccaccgccatcaccggtacaatgccctcttttggcttccagcag
agctgcgcccggggagccaaagctaacatgatcggcatgggggtcatggatggtcgccat
acactgggcaggtctgtgcccaaaaaagatgaactggacaaagggatcaaccggccgcag
ttctacaacaccctggatagacactgcagtaagaaggaggaaccaatcaaagtgattcca
ctggcgagcttctcctcccctgggcagcagacgcccactggcgtgggcagcagctctttc
ttacacgagcaccagttgtaa
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