Eleginops maclovinus (Patagonian blennie): 134860887
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Entry
134860887 CDS
T09869
Symbol
scn1lab
Name
(RefSeq) sodium channel, voltage-gated, type I like, alpha b isoform X1
KO
K04834
voltage-gated sodium channel type II alpha
Organism
emac
Eleginops maclovinus (Patagonian blennie)
Brite
KEGG Orthology (KO) [BR:
emac00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
emac04040
]
134860887 (scn1lab)
Ion channels [BR:
emac04040
]
Voltage-gated cation channels
Sodium channel, voltage-gated (Nav)
134860887 (scn1lab)
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
Ion_trans
Na_trans_assoc
Na_trans_cytopl
IQ_SCN5A_C
PKD_channel
GPHH
ATP-synt_B
PFF1_TM
Spem1
New_glue
Zip
Motif
Other DBs
NCBI-GeneID:
134860887
NCBI-ProteinID:
XP_063733823
LinkDB
All DBs
Position
24:complement(4130742..4156379)
Genome browser
AA seq
2013 aa
AA seq
DB search
MAQLLVPPGPDSFHPFVPESLAAIERRIAEEEARRPRADRRVDSDDENGPRPNSDLEAGK
SLPFIYGDTPPRLVSTPLEDLDTFYSNQKTFIVLNRGKTIFRFNATPALYILSPFNPLRR
VAIRVLVHSMFSMLIMFTILTNCAFMTLSNPPEWAKNVEYTFTGIYTFESLIKILARGFC
VGKFTFLRDPWNWLDFSVILMAYVTEFVDLGNVSALRTFRVLRALKTISVIPGLKTIVGA
LIQSVKKLSDVMILTVFCLSVFALIGLQLFMGNLRQKCVRWPFGNNATNSSNVTSGNAFF
NHSLLDINTTIVQNTTKNHFNWTEYISDEANYYFLPGRRDALLCGNGSGAGLCPEGFMCM
KAGRNPDYDYTSFDSFSWAFLSLFRLMTQDFWENLYQQTLRAAGKPYMIFFVLVIFLGSF
YLVNLILAVVAMAYDEQNQATIEEAQQKEEEFQAMLEQLKRQQEEAQVAAAAATESGGYS
ERGAPASETSSGTSKLSSKSAKERRNRRKKRKQKEEEEERGGRDKFHKSESEDSIKRSNF
RFSIDANRLSYEKRCSSPNQSLLSIRGSLFSPRRNSRASLFSFRGRARDMGSENDFADDE
HSTFEESDSRRGSLFLPRRLERRCSAVSQTSLGAPRIMLPANGKMHCAVDCNGVVSLVGG
TSVTTSPVGVLLPEGTTTDTELKKRRFRHPSTDYLDELVARQRAMSVASILTNTMEELEE
SRQKCPPCWYRFANACLIWDCYPAWLKIKDVVCTVVMDPFVDLAITICIVLNTLFMAMEH
YPMTKEFDNVLSVGNQVFTGIFTAEMCFKIIALDPYYYFQEGWNIFDGIIVSLSLMELGL
ANVEGLSVLRSFRLLRVFKLAKSWPTLNMLIKIIGNSVGALGNLTLVLAIIVFIFAVVGM
QLFGKSYKECVCKISESCELPRWHMHDFFHSFLIVFRVLCGEWIETMWDCMEVAEQTMCL
IVFMMVMVIGNLVVLNLFLALLLSSFSADNLAATDDDSEMNNLQIAVGRIQRGIAFVKSM
LRQFFQSLCFGGAGKGSGLAEESKPLDELHSNGKDNCIPNHTSVEITRDPSVVYMTEGNG
RAGGGLVIEVGGDTTGKYPMEECDYMSFIHNPTLTVTVPIAVGESDFENPNTEDFSSDSS
DMEGSKEKIDIEPHPLSSSEGSTVDIRPPGDGVDSVELEPEESLEPEACFTEGCVSRFQC
CQINEEEEYFKSWWTLRKTCFIIVEHNWFESFIIFMILLSSGALAFEDIYIEQRRTIKTV
LEYSDKVFTYIFILEMLLKWVAYGFVKYFTNAWCWLDFLIVDVSLVSLVANALGYSELTA
IKSLRTLRALRPLRALSRFEGMRVVVNALLGAIPSIMNVLLVCLIFWLIFSIMGVNLFAG
KYYYCVNTTNDEVFPISVVNNRSECLNLANDSARWKNVKINFDNVGAGYLALLQVATFKG
WMVIMYAAVDSRNLEDQPEYEVNLYMYLYFVIFIIFGSFFTLNLFIGVIIDNFNQQKKKF
GGQDIFMTEEQKKYYNAMKKLGSKKPQKPIPRPTNEFQGCVFDFITKQAFDIIIMILICL
NMVTMMVETDDQTPETASMLYWINLVFITLFTGECVLKMISLRHYYFTIGWNIFDFVVVI
LSIVGMFLSEVIEKYFVSPTLFRVIRLARIGRILRLIKGAKGIRTLLFALMMSLPALFNI
GLLLFLVMFIYAIFGMSNFAYVKREEGIDDMFNFETFGNSMICLFQITTSAGWDGLLAPI
LNKREPDCDSQMEHPGNNYKGNCGNPSVGIFFFVSYIIICFLIVVNMYIAVILENFSVAT
EESAEPLSEDDFEMFYEVWERFDPDATQFMEYSKLSDFADTLDPPLRMAKPNMIQLISMD
LPMVSGERIHCLDILFAFTKRVLGESGEMDVLRGQMEERFMASNPSKVSYEPITTTLRRK
QEDMAALIIQRAFRRFLFCSTMKKASALYKEQLKEGMRDPDKDVMVICKFSENSTSEKTD
MTASTASPPSYNSVTKSDKDKYEKENKGKDRKK
NT seq
6042 nt
NT seq
+upstream
nt +downstream
nt
atggcacagctgcttgtaccgcccggacctgacagcttccaccccttcgtccccgagtcg
ttggccgccatcgagaggcgcatcgccgaggaggaggcccggagaccacgggcggaccgc
cgcgtcgacagcgatgatgaaaacgggcccaggcccaacagcgacctggaggcggggaaa
tctctccccttcatctacggcgacacccctccccgcctggtgtccacccctctggaggac
ttggacaccttctacagcaatcagaagaccttcatagtattgaatcgcgggaagacaatc
ttccgtttcaacgccactcctgccttgtacatcctaagccccttcaaccctctgaggagg
gtagccattagagttttagtacactcgatgttcagcatgttgatcatgttcacaatcctg
accaactgtgctttcatgaccctcagtaatcccccagaatgggccaagaatgtagagtac
acattcacagggatttacacctttgagtccctcataaagatcctggccaggggcttctgt
gtggggaagttcaccttcctgcgggacccgtggaactggctggactttagtgttatcctc
atggcatatgtcacagagtttgtggacctgggcaatgtctcagcactgcgaaccttcagg
gttctgcgagccttgaaaactatatcagtcatcccaggcttgaaaaccatcgtcggcgca
ctgattcagtcggtgaaaaagctgtccgacgtcatgatcctcaccgtgttctgcctcagc
gtcttcgctctcatcggcctgcagctcttcatgggcaacttgaggcagaagtgcgtgcgc
tggccattcggcaacaacgccaccaacagcagcaacgtcacctccggcaacgcgtttttc
aaccactccctgctggacatcaacaccacaattgtgcagaacaccacgaaaaaccacttc
aactggacggagtacatcagcgatgaggccaactactatttcctccctggccgaagggat
gcgctgctctgtgggaatggcagcggcgctggactctgtccagagggctttatgtgtatg
aaagccggccgtaaccccgactacgactacaccagcttcgactccttcagctgggccttc
ctgtccctcttcagactcatgacccaggacttctgggaaaacctgtaccagcagactttg
cgcgcagcaggaaagccctacatgatcttcttcgtgctggtgatcttcctgggctccttc
tacctggtcaacctgatcctggccgtggtggccatggcgtacgacgagcagaaccaggcg
accatcgaggaggcacagcagaaggaggaggagttccaggccatgctggagcagctgaag
agacagcaggaggaggctcaggttgccgcggcagcagccacggagagcggagggtacagc
gagaggggggccccggcctccgagacctcctcggggacgtcgaagctcagctcgaagagt
gccaaggagcgacgcaacaggcggaagaagaggaagcagaaggaggaggaggaggagagg
gggggccgcgacaagttccacaagtctgagtctgaggacagcatcaagagatccaacttc
cgcttctccatcgatgcaaacagactctcctatgagaagagatgctcctcgcccaaccag
tctctcctcagtatccgtggatccctgttctctcctcggaggaacagccgcgccagcctg
ttcagcttccggggccgggcacgcgacatgggctccgagaacgacttcgccgatgacgag
cacagcaccttcgaggagagcgacagccgccggggttcgctgttcttgccacgccgcctt
gagcgccgctgcagcgctgtgagccagaccagcctcggagcacctcgcatcatgctgccc
gccaacggcaagatgcactgcgccgtggactgcaacggcgttgtgtctctggtcggagga
acttctgtaacaacctcccctgtaggtgtcctgctgcctgagggcaccactacagataca
gagctgaagaaacggcgtttccgtcatccatccacggattatttagacgagctagtggcc
aggcagagagccatgagcgtggccagtatcctcaccaacaccatggaagagcttgaagag
tcgagacagaaatgccccccctgctggtatagatttgccaacgcctgtctgatctgggat
tgttaccccgcatggctgaaaataaaagacgtggtctgcacagtggtcatggacccgttt
gtggatctggccatcacaatttgcatcgtcctcaacaccctcttcatggccatggagcat
taccccatgacgaaggaattcgacaacgtgctctcagttggaaaccaggttttcactggc
atcttcacagcagagatgtgcttcaagatcatcgccctggatccctactactacttccag
gagggctggaacatctttgatgggatcattgtgagtctgagtctgatggagctcggcttg
gccaacgtggaaggcctgtctgtgctcaggtccttcagattgttgagggtcttcaaactg
gccaagtcgtggcccaccttgaacatgctgatcaagatcatcgggaactcggtgggcgct
ctggggaacctgactctggtgctggccatcatcgtcttcatcttcgccgtggtgggcatg
cagctgtttggcaagagctacaaggagtgcgtgtgcaagatttcggaaagctgcgagctg
ccccgctggcacatgcacgacttcttccactccttcctcatcgtgttccgggtgctgtgc
ggggagtggatcgagaccatgtgggactgcatggaggtggcggaacagaccatgtgcctg
attgtgttcatgatggtcatggtcattggaaacctggtggtgttaaacttgttcctggct
ctgctcctgagctcattcagcgccgacaacctggcagcgactgacgacgacagcgagatg
aacaacctgcagatcgccgtgggtcggatccagcggggcatcgcatttgtcaagtccatg
ttgcggcagttctttcagagcctctgcttcggcggggccggtaagggctccggcctggcg
gaggagagcaaaccgttagacgagctgcacagcaacggcaaggacaactgcatcccaaac
cacacctcagtggagatcaccagagaccccagtgtggtgtacatgacagaaggcaatggg
cgggcaggaggggggctggtaattgaggttggtggggacactacagggaagtacccgatg
gaggaatgcgactacatgtcatttattcataaccccactctgacagtcacagtgcccatc
gctgtgggagagtctgactttgagaacccgaacacggaagatttcagcagcgactcgtcg
gacatggagggcagcaaagagaagatcgatatagagccccaccctctgagctcatcggag
gggagcacggtggacatccgcccccctggagacggggtggattcggtggagctggagccg
gaggagtcgctggaaccagaggcgtgcttcacagagggctgtgtgagcaggttccagtgc
tgccagatcaacgaggaggaagagtactttaagagctggtggacactcaggaaaacctgc
ttcatcatagtcgagcacaactggtttgaatccttcatcatattcatgatcctgctcagc
agcggagcactggcttttgaggacatttacatcgagcagcggaggaccatcaaaacggtg
ctggagtactcggacaaagtcttcacctacatcttcatcctggagatgcttctgaagtgg
gtggcttacggcttcgtcaagtatttcaccaacgcctggtgctggctcgacttcctcatc
gtagacgtgtccctggtcagcctcgttgccaacgctctgggctactcggagctcactgcc
atcaaatctctgaggacactgcgagccctgcgccccctgagggccctgtctcggtttgag
ggcatgagggtggtggtgaacgcgctgctgggggccatcccctccatcatgaacgtgctg
ctggtgtgcctcatcttctggctcatcttcagcatcatgggggtcaacctgttcgcaggg
aagtactactactgcgtcaacaccaccaacgacgaggtcttccccatcagcgtggtcaac
aacaggagcgagtgcctgaacctggcgaacgacagcgcccgatggaagaacgtcaagatc
aactttgacaacgtgggggccggatacctggctctgctgcaagtggccacatttaagggg
tggatggtcatcatgtacgcagctgtggactctcgaaatttggaagaccagcctgaatat
gaagtgaacctgtacatgtacctctactttgtcatcttcatcatcttcggctccttcttc
acactcaacctgttcattggtgtcatcatcgacaacttcaaccagcagaagaaaaagttt
ggaggtcaggacattttcatgacagaagagcagaaaaagtactacaacgccatgaagaag
ctgggctccaagaaaccacagaaacccatcccccggcctacaaacgagttccagggctgc
gtgtttgacttcatcacaaagcaggccttcgacatcatcatcatgatcctcatctgtctc
aacatggtgaccatgatggtggagacagacgaccagacgccggaaactgcctcaatgctc
tactggatcaacctggtcttcatcacactcttcaccggggagtgtgtgctcaagatgatc
tccctgcgccactactacttcaccatcgggtggaatatatttgactttgttgtggtgatc
ctgtccattgtaggtatgtttttatccgaagtcatcgagaagtactttgtgtccccgaca
ctgttccgagtgatccgtttggccaggataggtcgcatcctgcgcctgatcaaaggtgcc
aaaggcatccggacgcttctctttgctctgatgatgtcactccccgccttgttcaacatc
ggactcctcctcttcctggtcatgttcatctacgccatcttcggcatgtccaacttcgcc
tacgtgaagcgggaagaggggatcgacgacatgttcaactttgagacgttcgggaacagc
atgatctgtctgtttcagatcaccacgtcggcgggctgggacgggctgctggcgcccatc
ctgaacaagagggagcctgactgcgacagccagatggagcacccgggaaacaactacaaa
ggtaactgcggcaacccgtcggtgggcatcttcttcttcgtcagctacatcatcatctgc
ttcctcatcgtggtcaacatgtacatcgccgtcatcctggagaacttcagcgtggccaca
gaggagagcgccgagccgctgagcgaggacgacttcgagatgttctatgaggtgtgggag
cgcttcgaccccgacgccacacagttcatggagtacagcaagctgtcggacttcgctgac
accctggacccgccactgcgcatggccaaacccaacatgatccagctgatctccatggac
ctgcccatggtgagcggcgagcgcatccactgcctcgacatcctgttcgccttcaccaag
cgcgtgctgggcgagagtggcgagatggatgtgttgcgcgggcagatggaggagcgcttc
atggcctccaacccctccaaggtgtcctacgagcccatcaccaccacgctgcgccgcaaa
caggaggacatggcggcgctcatcatccagagagccttccgccgcttcctgttctgcagc
accatgaagaaggcctctgccctctacaaagagcagctgaaggagggcatgcgggacccc
gacaaggacgtcatggtcatctgcaagttcagcgagaactccacttcggagaaaacggac
atgacggcctcaacagcctccccgccctcctacaacagcgtgaccaagtcggacaaggac
aaatacgagaaggaaaacaaagggaaggaccggaagaaataa
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