Eleginops maclovinus (Patagonian blennie): 134860954
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Entry
134860954 CDS
T09869
Symbol
ddx20
Name
(RefSeq) probable ATP-dependent RNA helicase DDX20
KO
K13131
ATP-dependent RNA helicase DDX20 [EC:
5.6.2.7
]
Organism
emac
Eleginops maclovinus (Patagonian blennie)
Brite
KEGG Orthology (KO) [BR:
emac00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
emac03041
]
134860954 (ddx20)
Enzymes [BR:
emac01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
134860954 (ddx20)
Spliceosome [BR:
emac03041
]
Other splicing related proteins
Proteins involved in snRNP biogenesis
SMN complex factors
134860954 (ddx20)
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SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
CMS1
AAA_30
Motif
Other DBs
NCBI-GeneID:
134860954
NCBI-ProteinID:
XP_063733969
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Position
1:complement(16998523..17004311)
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AA seq
780 aa
AA seq
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MAASVRKAAHDIETRKRTDDVLLSEGIDFSSLLLSQPVLDGLSSAGFQKPSPIQLKAIPL
GRCGLDLIVQAKSGTGKTCVFCTIALDSLVLENPATQVLVLAPTREIAVQIHSVVMAIGC
AVEGLECHVFIGGRPVSQDKTHLKKCHIAVGSPGRIKQLIELGMLSTASIRLFVLDEADK
LLEEGSFQEQINWIFSSLPVNKQMLALSATYPESLAQHLTRYMREPTFVRLNPSDMGLKG
LKQYYKLVQSQPLPHMVFQEKVQHLLELFSKIPFNQALVFSNLHTRAQHLADILSSKGLP
AVCISGGLTQDQRLEAMSKLKQYQCRVLISTDLTSRGIDAEKVNLVINLDVPQDWETYMH
RIGRAGRFGTQGLAVTYCCHGEEENKMMAIAQKCGLTLSMLPSTIEPSLMDESCDWDVCT
EASTPGLLPVPSSRTEKKKRAKQVTDESVEHSIQRKPEKTHPAPRLGAHREENTRRASPA
EVTLPQPPPRVVPTRKEQQDALPKIPPLSSFKKCRSRFMTLEEADLDFHSFITTGLGRSV
EVIRDFTGGEDGDGHRESTILNDDGAQRFKQKRWKSDLPPPRAVASSSSSQSEEDDEPDQ
TGGSEHRAITEPQIEARHTPSVSKAKAESTTSSYISTPKTYPQSASNASAWSQPENCESV
PIVRPSGHHRPTAPTQNGRNQSRKVTEKSAKQSKVFSEKMHREQKRERDGEQNDDEDNEE
EGEDWSAEGYWRASYRAWNDYYASMSPFQEQGYQSYYSVAHNWMAAYRMNAVYTEELLKD
NT seq
2343 nt
NT seq
+upstream
nt +downstream
nt
atggcggcctccgtgaggaaagcagctcacgacatagaaacgcgaaagcggaccgatgat
gtgcttttatcggagggaatagacttcagctctctgctgctttctcagcccgtgttggac
ggactgtcctccgcaggcttccagaaaccctccccgattcagctcaaggcgatcccactg
ggccgctgcggactcgatttgattgtacaggccaagtctggcacaggaaagacgtgcgtg
ttctgcaccattgccctggactcccttgtcctggaaaatcctgcgactcaggttcttgtc
ctggctcctactcgtgagatagcggtgcagattcactcagtggtgatggctataggatgt
gccgtggagggtctcgagtgccatgtattcatcgggggcaggcctgtgagtcaggacaaa
actcatctgaagaagtgccatatagctgtgggctcgcccggtcgtatcaaacagctcatc
gagctgggcatgttgtccactgccagcatcagactattcgttctagatgaggcagacaag
ctgctggaggaaggcagctttcaggaacagataaactggatattttcctctctacctgtg
aacaaacagatgctcgctctttctgccacctacccagaatcccttgctcagcacctgacc
cgctacatgagagagcccacttttgtcagactcaatcccagtgatatgggccttaaaggc
ctgaagcagtactacaagctggtgcagtcgcaacctttacctcacatggtttttcaggag
aaggtgcaacatttgctggagcttttcagcaaaatcccattcaaccaggcgctggtgttt
tccaatctacacacaagggctcagcacttagcagacatcctgtcctccaaaggcctacct
gctgtttgtatctcaggtggtctgactcaggaccagagactggaggccatgtcaaaactg
aagcagtaccagtgcagggtgctcatctccactgacctgacctccagaggtatagatgca
gagaaagtaaacctggtgattaatctggacgtgccgcaggactgggagacgtatatgcat
cgaattggacgtgctgggcgctttggcactcaagggctggctgtgacctactgttgccat
ggtgaggaggagaacaagatgatggccatcgctcagaagtgtggcctgaccttgtctatg
ttgccatccactatagagcctagtttgatggacgagtcatgtgattgggatgtctgcacc
gaggcttctactccaggcctgttacccgtgccctcctccaggacagagaagaagaagcgt
gccaagcaagtcactgatgaatctgtggagcacagcattcaaaggaaaccagagaaaacc
catccagcacccagactgggagcacaccgtgaagagaatactagaagagcttctcctgca
gaagtcactctcccacaaccccctcctcgggtggtgcccactcgaaaagagcaacaggat
gctctgccgaagatccctcctctcagctccttcaagaaatgtaggtcaaggttcatgacc
ctggaggaagctgatctggacttccacagttttattaccacagggttgggtagatcagtg
gaggtcatcagggatttcacaggtggagaggatggtgatggacatagagagtctaccatc
ctaaatgatgatggagctcaacgtttcaaacaaaaaaggtggaaatctgatcttccacct
ccaagggcagttgccagttcttcaagctcgcaatctgaggaagatgatgagccggatcag
acgggaggaagtgaacacagagcaatcactgagcctcagattgaagctagacacacaccc
agtgtgtccaaagcaaaggcagagtccactacatcatcatacatttcgacacccaaaacg
tatccccagtcagcatcaaatgcaagcgcttggtctcagcctgagaactgtgaatctgta
cccatcgttagaccgagtgggcatcacaggccaacggctccaacacagaacggcagaaat
caatccagaaaggttacagaaaagtctgcgaaacagagcaaagtgttttcagagaagatg
cacagagagcagaagagggaaagggatggagaacaaaacgatgatgaagataatgaggaa
gagggcgaggactggagtgctgaaggttactggagagccagctacagagcctggaatgat
tactatgcctccatgtctcctttccaagagcagggttaccaaagctactacagtgtagcc
cacaactggatggcagcttatcgtatgaatgctgtctacactgaggaactcctaaaagac
tga
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