| Entry |
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| Name |
(RefSeq) ATP-dependent RNA helicase DDX3X-like isoform X1
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| KO |
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| Organism |
emac Eleginops maclovinus (Patagonian blennie)
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| Pathway |
| emac04622 | RIG-I-like receptor signaling pathway |
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| Brite |
KEGG Orthology (KO) [BR:emac00001]
09150 Organismal Systems
09151 Immune system
04622 RIG-I-like receptor signaling pathway
134860984
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:emac03019]
134860984
03041 Spliceosome [BR:emac03041]
134860984
03036 Chromosome and associated proteins [BR:emac03036]
134860984
Enzymes [BR:emac01000]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
134860984
Messenger RNA biogenesis [BR:emac03019]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
eIF4F and regulatory proteins
134860984
mRNA cycle factors
Common to processing body (P body) and stress granule
134860984
Spliceosome [BR:emac03041]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
RNA helicase-like proteins
134860984
Chromosome and associated proteins [BR:emac03036]
Eukaryotic type
Gene silencing
RISC (RNA-induced silencing complex)
134860984
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| SSDB |
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| Motif |
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| Other DBs |
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| LinkDB |
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| Position |
24:2545937..2561342
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| AA seq |
729 aa
MSHVAVENVHGLEQQLAVLDLSAADGQGGGPNRRYIPPHLRNNEASKNAGNAFNPGRPGG
YTIAPPATYGWDGGRNNFVNGYHDNRMAGGNTFQHRGPPRMERGRGGIGGGYRGNRGGAF
NPIIPAAQPMAFGGYENKDAGGWNTPKEAYGNFGNNRGKSAFFNDRGNANRGRFDHGGFS
GGGGGGGGGGNSRWVEEPREEGDWAKPTARNERLEHELFSGSNTGINFEKYDDIPVEATG
QNCPHHIESFQDVDMGEIVMGNIALCRYTRPTPVQKYAIPIVKSKRDLMACAQTGSGKTA
AFLLPILSQIYSEGPGEALNAAKASGQDNGKYGRRKHYPMSLILAPTRELALQIYDEARK
FSYRSRVRPCVVYGGADIGQQIRDLERGCHLLVATPGRLVDMMERGKIGLDYCNYLVLDE
ADRMLDMGFEPQIRRIVEQDTMPHKGIRQTMMFSATFPKEIQILARDFLEEYIFLAVGRV
GSTSENITQKVVWVEESDKRSFLLDLLSATGKDSLTLVFVETKKGADALEDFLYREGYAC
TSIHGDRSQRDREEALSQFRSGKCPILVATAVAARGLDISNVKHVINFDLPSDIEEYVHR
IGRTGRVGNLGLATSFFNDKNGNITKDLLDILVEAKQEVPSWLESLAYEHQHKSNNRGRS
KRFSGGFGARDYRQTAAGGTAGGFGGRGGRNQAGHGGNRGFGGGGFGNFYTSDGYGGNYQ
HSQVDWWGN |
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| NT seq |
2190 nt +upstreamnt +downstreamnt
atgagtcatgtggccgtcgaaaatgtccacggtctagagcagcagctcgctgtcctagac
ttgagtgcagcagacggacaaggtggaggccctaaccgacggtacattcctccacattta
cggaacaatgaggcttccaaaaatgcaggaaatgccttcaatcctggtcgaccgggtggc
tacaccatagcgccgccagcaacctacggttgggacgggggtcgcaacaactttgtgaac
ggctaccatgacaaccgcatggccggtggcaacacgtttcaacaccgagggccgcctcgc
atggagcgcggacgcggcgggatcggagggggttaccgtggcaacaggggcggagccttc
aaccccatcatcccggcggcgcaacccatggcgttcggcggctacgaaaacaaagatgca
ggtggctggaacacacccaaggaagcttatggcaattttggcaacaaccgagggaagtcc
gccttcttcaacgacagaggaaacgccaacagaggaaggtttgatcatggtggattcagt
ggtggcggtggaggaggaggaggaggaggaaacagtcgctgggtggaggagcccagagag
gaaggtgactgggccaaaccaacggcacgaaacgaacgccttgaacatgagttgttctcc
ggcagtaacactgggatcaactttgaaaagtacgatgacattcctgttgaggccacggga
cagaactgccctcaccacatcgagagtttccaggacgtggacatgggggagatcgtcatg
ggtaacatcgctctgtgtcgctacaccagaccgacccctgtccagaaatatgccattcct
attgtcaagtcgaagcgggacctcatggcctgcgcacagacaggttctggaaagactgca
gcctttctgctgccgattctcagccagatctacagcgaaggaccaggagaagctctcaac
gcagctaaagcatctggacaggacaatggaaagtatggtcgtcgtaagcactaccccatg
tctctgatcttggctccgaccagagagctggccctgcagatatatgacgaagccaggaag
ttttcctaccgctcaagagtgcgtccctgtgtcgtgtacggaggcgcagacattggccag
cagatcagagatctggagagaggctgtcacctgctggtcgccacacctggcagactggtg
gacatgatggagagaggcaagatcggactggactactgcaactacctggtcctggatgag
gcagatcgtatgttggacatgggattcgagccccagattaggcgcatcgttgagcaggac
accatgccgcacaaaggcatccgacagaccatgatgttcagcgccaccttccccaaagag
atccagatcctggccagggatttcctggaagagtacatcttcctggcagtgggcagagtg
ggctccacctcggagaacatcacccagaaagtagtgtgggtggaggagagcgataagagg
tctttcctcctggatctgctcagtgctacaggtaaggactcgttgaccctggtgttcgtg
gagaccaagaaaggagccgacgctctggaggacttcctgtatcgagagggctatgcctgc
accagtatccatggcgaccgttcccagagggaccgagaggaggccctgagtcagttcaga
tccggaaagtgtcccatcctggtggccacagcggtagcagctcgtggtctggacatctcc
aacgtgaaacatgttattaacttcgatctgcccagcgacatagaggagtacgttcaccgc
atcggacgtacgggacgagtgggaaacctcggactggccacatcgttcttcaatgataaa
aatgggaacatcactaaggacctgctggacatcctggtggaggccaaacaggaagttccc
tcatggctcgagagcctggcgtacgaacaccagcataagagcaacaacagaggccgctct
aagaggttctccggtggtttcggagcacgtgattaccgtcagacggcagccggaggaacc
gccggagggttcggaggacgtggaggtcgcaaccaggccggacatggaggaaaccgcgga
tttggaggaggtggtttcggtaacttctacaccagtgacggctacggaggaaactaccag
cactctcaagtcgactggtggggcaactag |
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