Eleginops maclovinus (Patagonian blennie): 134861356
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Entry
134861356 CDS
T09869
Symbol
ddx61
Name
(RefSeq) probable ATP-dependent RNA helicase ddx6
KO
K12614
ATP-dependent RNA helicase DDX6/DHH1 [EC:
5.6.2.7
]
Organism
emac
Eleginops maclovinus (Patagonian blennie)
Pathway
emac03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
emac00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
134861356 (ddx61)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
emac03019
]
134861356 (ddx61)
03036 Chromosome and associated proteins [BR:
emac03036
]
134861356 (ddx61)
Enzymes [BR:
emac01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
134861356 (ddx61)
Messenger RNA biogenesis [BR:
emac03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
Common to processing body (P body) and stress granule
134861356 (ddx61)
mRNA degradation factors
5'-3' decay
Decapping complex
134861356 (ddx61)
Chromosome and associated proteins [BR:
emac03036
]
Eukaryotic type
Gene silencing
piRNA pathway
134861356 (ddx61)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
CMS1
NA-iREase2
Motif
Other DBs
NCBI-GeneID:
134861356
NCBI-ProteinID:
XP_063734600
LinkDB
All DBs
Position
3:4767412..4776328
Genome browser
AA seq
483 aa
AA seq
DB search
MATARTANPAPMIGLNKAANGQLKGQMGLLSSVQQSSALQKKTSIPQSSGGIKFGDDWKK
CLDLPPRDTRMRTSDVTSTKGNEFEDYCLKRELLMGIFEMGWEKPSPVQEESIPIALSGR
DILARAKNGTGKSGAYLIPLLERIDLKKDHIQAIVMVPTRELALQMSQISIQLSKHLGGV
KVMATTGGTNLRDDIMRLDETVHVVIATPGRILDLIKKGVAKMDRAQLIVMDEADKLLSQ
DFVVLIEDIISFMPKDRQILLYSATFPISVQKFMSKHLKKPYEINLMEELTLKGITQYYA
YVTERQKVHCLNTLFSRLQINQSIIFCNSTQRVELLAKKITQLGYSCFYIHAKMMQEYRN
RVFHDFRNGLCRNLVCTDLFTRGIDIQAVNVVINFDFPKNAETYLHRIGRSGRFGHLGLA
INLITSEDRYNLKNIEDQLVTDIKPIPSCIDKSLYVAEFHSVDPDAEDDDLEIGARNKDL
GGI
NT seq
1452 nt
NT seq
+upstream
nt +downstream
nt
atggctacagcaagaacagcaaacccagcgccaatgattggattgaacaaagcagcaaat
gggcagctcaaaggacagatgggactcctttcgagtgtccagcagtcgtctgccctccag
aagaagaccagcattcctcagagcagcgggggcatcaaatttggtgatgactggaagaag
tgcctggatctgcctccgagagacaccaggatgagaacttctgatgtgacctcaactaag
ggaaatgaatttgaagactactgcctaaagcgtgaactgctaatgggaatctttgaaatg
ggatgggagaaaccgtcccctgtccaggaggagagcatccccatcgctttgtcaggcaga
gatattttggctcgggctaagaatggcaccggaaaaagtggcgcctacctcatccctctg
ctggagaggatagatctgaagaaggatcacattcaggccatagtaatggtgccaaccaga
gagctggccctgcagatgagccagatcagcatccagctcagcaagcacctcggaggtgtc
aaggtgatggcgaccacaggtggcactaacctgagggacgacatcatgcgtcttgatgag
acagtgcatgtagtgattgctacaccaggcaggatactcgacctgatcaagaagggtgtg
gcaaagatggacagagcccaattgattgtgatggatgaggcagataagttgctgtcacag
gactttgtggtcctgattgaagacatcatcagcttcatgcccaaggaccgtcagatccta
ctttactctgccactttccccatcagtgtgcaaaaattcatgagcaagcacctgaagaag
ccttatgagatcaacctgatggaggaactgaccttgaagggcatcactcagtactacgct
tatgtgactgaaagacaaaaggtccactgtctcaacacactcttttccaggcttcagatc
aatcagtccatcatcttctgtaactccacccagcgggttgagcttctggccaagaaaatc
acccagctgggatactcgtgcttctacatccatgcgaagatgatgcaggagtacaggaac
cgtgtgttccacgacttcaggaatgggttgtgcagaaacctggtctgcacagatctgttt
actcggggaattgacatccaggcagtgaatgtggtcatcaactttgacttccctaaaaat
gcagagacctacctgcatcgcatcggcagatcagggcgttttggtcacctgggtctggcc
atcaacctcatcacttcagaagaccgctacaacctgaagaacattgaggaccaactggtc
actgacatcaagcccatccccagctgcattgataagagcctgtatgtggcggagtttcac
tctgttgaccccgatgctgaagacgacgaccttgagatcggggccagaaacaaagacctg
ggaggaatctga
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