Eleginops maclovinus (Patagonian blennie): 134861553
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Entry
134861553 CDS
T09869
Symbol
smg9
Name
(RefSeq) nonsense-mediated mRNA decay factor SMG9
KO
K18735
protein SMG9
Organism
emac
Eleginops maclovinus (Patagonian blennie)
Brite
KEGG Orthology (KO) [BR:
emac00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
emac03019
]
134861553 (smg9)
Messenger RNA biogenesis [BR:
emac03019
]
Eukaryotic type
mRNA surveillance and transport factors
Surveillance factors
Other surveillance factors
134861553 (smg9)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Smg8_Smg9
ABC_tran
AAA_16
DUF6079_1st
URGCP_GTPase
NB-ARC
AAA_18
AAA_29
MeaB
Motif
Other DBs
NCBI-GeneID:
134861553
NCBI-ProteinID:
XP_063734909
LinkDB
All DBs
Position
3:complement(13829142..13848992)
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AA seq
508 aa
AA seq
DB search
MSESGHSQPGMYGQGRRRRRRRGDRDVGAPGQNLSGPSRDREYQPRERRDGSEDPPGPLI
QKTPIILAKPPGERAKPSQNTPVSGAPVLEKPIMLMKARDDGGKPGTPPEAAAQPSGTGP
SKIEREGQRPTQPVYQIQNRGMGASASSSAVDPMVGQSKLLPPEKMKHSIKLVDDQMNWC
DSAMEYLRDQTDMLVVGVIGLQGSGKSTIMSLLSANTPEEDQRGYVFRAQTQEIKERGGN
QSTGIDFFITQERVIFLDTQPMLSPSILDHLINNDRKLPPEYNLPHTYVEMQSLQIAAFL
FTVCHVVIVVQDWFTDLNLYRFLQTAEMLKPSTPSASHDSTGSSGNDDGAEYYPHIVFLQ
NKARRDDFCPRNLNNMHMVVDKLMAHSHLKYKGTLSMLDCNIFPGLGQDYLDTEVNMFLL
PMQENDGEDNLTKAGTGAYPLFSLLPGYKGHPAFSTMVSKLRSQILAMPRCQLSHTILTE
KNWFHYAARIWDGVKKSSALSEYSRLLC
NT seq
1527 nt
NT seq
+upstream
nt +downstream
nt
atgtcggagtccggccacagtcaacctgggatgtacggacagggacgtaggaggaggcgc
cgccggggagacagagatgttggagctccgggccagaacctgtccggtccaagtcgggat
cgagaatatcaaccaagggaacgaagggatgggagcgaggatccacctggcccactcatt
cagaagactcccatcattcttgcaaaaccccctggggaaagggcaaagccgtcacagaat
actcctgtcagtggagctccggtcctggagaagcccatcatgctcatgaaagccagggac
gatggagggaagccgggcactcctcctgaagcagcagcccagccttctggtactgggccc
tccaagatagagagggaggggcagcgacccacccagcccgtataccagatccaaaacaga
ggaatgggtgcctctgcttcgagcagcgctgttgacccgatggttggccagtcaaaactc
ctccctccggagaagatgaagcacagcattaagcttgtggatgatcagatgaattggtgt
gacagtgccatggagtatctgagggaccagacagatatgttggtggtgggagtcatcggc
ctgcagggaagtgggaaatctacgatcatgtcgctattatctgccaacactcctgaggaa
gatcaaaggggttatgtattcagagcccagactcaagaaatcaaggaaagaggaggaaac
cagagtacaggcattgatttcttcatcacccaggagagagtcatcttcttggatacacag
ccaatgctcagcccatcgatcctcgaccacctcatcaacaacgatcggaagctgcccccg
gagtacaaccttccccacacatatgttgagatgcagtctcttcagattgccgccttcctg
tttacagtttgccatgtggtcattgtggttcaagactggttcactgacttaaacctctac
aggtttcttcagactgcggagatgctgaagccttccactccatctgcaagccatgacagc
actggctcatcgggcaatgatgatggagcagagtactatcctcatatagtgttcctccag
aataaggccagacgggatgatttctgcccaaggaatctgaataacatgcacatggtggtg
gacaaattaatggcccactctcatctcaaatacaaaggaactttgtccatgctagactgc
aacatcttcccaggcttggggcaggactatctggatactgaagtcaacatgttcctcctt
cctatgcaggagaatgatggggaagataatctgactaaagcagggacgggagcatacccg
ctcttctcactgctcccggggtacaaaggacatcctgccttctccaccatggtttcaaaa
ctccgcagccaaatactagccatgccccgatgtcagctgtcacacaccatcctcactgag
aagaactggtttcactatgcagctcgtatctgggatggggtgaaaaagtcctcggccctc
tctgagtacagccgcctgctctgctaa
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