Eleginops maclovinus (Patagonian blennie): 134861607
Help
Entry
134861607 CDS
T09869
Symbol
smarcc1a
Name
(RefSeq) SWI/SNF complex subunit SMARCC1
KO
K11649
SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily C
Organism
emac
Eleginops maclovinus (Patagonian blennie)
Pathway
emac03082
ATP-dependent chromatin remodeling
Brite
KEGG Orthology (KO) [BR:
emac00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
134861607 (smarcc1a)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
emac03021
]
134861607 (smarcc1a)
03036 Chromosome and associated proteins [BR:
emac03036
]
134861607 (smarcc1a)
Transcription machinery [BR:
emac03021
]
Eukaryotic type
RNA polymerase II system
Coactivators
BAF/PBAF complex
134861607 (smarcc1a)
Chromosome and associated proteins [BR:
emac03036
]
Eukaryotic type
Chromatin remodeling factors
BAF complex
134861607 (smarcc1a)
PBAF complex
134861607 (smarcc1a)
GBAF(ncBAF) complex
134861607 (smarcc1a)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SWIRM-assoc_2
SWIRM-assoc_3
SWIRM-assoc_1
SWIRM
Myb_DNA-binding
Myb_DNA-bind_6
HEAT_GCN1
BRCT
BRCT_2
Chromo
Motif
Other DBs
NCBI-GeneID:
134861607
NCBI-ProteinID:
XP_063734998
LinkDB
All DBs
Position
3:complement(2822878..2843628)
Genome browser
AA seq
1120 aa
AA seq
DB search
MATAATTAGATGSGGTATGPAGGGTTAVGRKKDGGPSTKFWESSETISQFETVRQWIGKH
YKKYVQNDSPSSKSLAGLVVQLLQFQEDAFGRRVNNPALTKLPAKCFLDFKAGGALCHIL
GSVYKFKSEQGWRRFDLQNPSRMDRNVEMFLNVEKNLVQNNCLTRPTVFLSPDIEQKQTN
KLKDIIKRHQGSITDDKSKATHHISPSTSQQEEEEWLRPVMRKDKQVLVHWGLSPDSYDT
WVSAAEVDGDVEDPPSTDRPWKVHAKWVLDTDSFNEWMTEEDYEVDENKKPVHFRQRIFP
KEEESSRTPDRKERKANSASKKRRRSPSPPSTPAESRKKGGKKGNQGPSWKRRGHRGEEE
DTEEDLNKDMDNSSAGASMEEGSVSKNANSKKDSESTPVKGGTLADLDDMEDDSVLSGGK
DDEEQGKAEINRLMDASEDNVTEQTHHIIIPSYSAWFDYNCIHEIERRALPEFFNGKNKS
KTPEIFLAYRNFMIDTYRLNPQEYLTSTSCRRNLTGDVCAIMRVHAFLEQWGLVNYQVDS
ESRPLPMGPPPTPHFTVLADTPSGLIPLNHRPPPIPPQQQMPNFADKIKDKSIDLQNFGL
RSDLYNKKNLKGKTVNSTRDWTEQETLLLLEALEMFKDDWNKVSEHIGSRTQDECILHFL
RLPIEDPYMESTEASLGPLAYQPIPFSQSGNPVMSTVAFLASVVDPRVASAAARAALEEF
SRVREEVPAELVEAHVKKVQEAARSTGKVDPAFGLESSGIAGTAPEEPEKTETPEAEKIE
TDTDSQQADKAELKDEAEKPSESAEKSDKTEAADKVKKEGSESSEREEESEEGGEVKTAP
ADKDKEESMETSSSEPEKDKEEKAATEEGEEKRKKLEHDIGEGNIATAAAAALASAATKA
KHLAAVEERKIKSLVALLVETQMKKLEIKLRHFEELETIMDREKEALELQRQQLLTERQA
FHMEQLKYAEMKARQQMEQQAAAAAAAAAQAQGQAPGSGPHAGHPGGPLPHHGAPMPHHG
VAPPGAVMHTGYPSMGHHQMGPHHPGQTGPMGPGQPIPGRMMSGPPSAGAPPGGMPPMMP
PRHPGAPNGMYPGPPPAQPEAVPVVPVGPAAPASGRVADN
NT seq
3363 nt
NT seq
+upstream
nt +downstream
nt
atggcgacggcggcgacaacggcaggcgcgacgggctcaggcggaacggcgacgggtcct
gctggcggcgggaccaccgcagtggggaggaagaaagacggcggtccgtccacgaaattc
tgggaaagttctgagacgatatcgcagtttgagacggttcggcagtggatcggaaaacac
tacaagaagtatgtccagaatgactccccgtccagtaaatccttggcgggtctggtggtc
cagctgctgcagttccaggaggatgcgttcggacgcagggtcaacaatcctgctctcacc
aagctacctgccaagtgtttcctggatttcaaggcaggaggtgctctctgtcacatcctg
gggtcggtctacaagtttaagagcgagcagggatggcgtagatttgacctgcagaatcct
tccaggatggacaggaacgtggaaatgttcctaaatgtggagaagaacctggtccagaat
aactgcttgactcgacccaccgtgttcctgtcaccggacatcgagcagaaacaaaccaat
aagctgaaagacatcatcaaacggcaccagggctccattactgatgacaagtcaaaggcc
acccaccacatttccccctctacatcccaacaagaagaggaggagtggcttcgtcctgtg
atgaggaaagacaaacaggtgctggttcactggggtctttcccccgacagctatgatacc
tgggtgtcagcagcagaagtggatggtgacgtggaggacccccccagcaccgaccggcca
tggaaggtgcatgcaaagtgggtgttagacactgactcgttcaacgaatggatgaccgaa
gaagactacgaggtggacgagaacaagaagccagtccacttccgccagaggatcttcccc
aaggaggaggagtcttcccgtacacccgatcgcaaggagcgcaaggccaactccgccagc
aagaagaggaggcgctcgccctcaccgcccagcactcccgccgagtcccgcaagaaggga
ggaaagaaggggaaccaggggccttcctggaagcgtcggggccacagaggcgaggaggag
gacacagaggaggacctgaacaaagacatggacaactcctcagctggtgccagcatggag
gagggcagcgtgtccaaaaacgcaaactcaaagaaagacagtgagagcactccggtgaaa
ggagggactttggctgacctggatgacatggaggatgactcggtgctgtctggtggaaag
gacgatgaggagcagggcaaagccgaaatcaaccgactgatggacgccagcgaggacaac
gtgaccgaacagactcaccacatcatcatccccagctacagcgcctggttcgactacaac
tgcatccatgagatcgagaggagagccctgcccgagttcttcaacggaaagaacaagtcc
aaaactccagagatattcctggcctaccgtaacttcatgatcgacacgtaccggttaaat
cctcaggagtacctcacctccacttcctgtcgcaggaacctgaccggggacgtctgtgcc
atcatgagggttcatgcgttcttggagcagtggggtctggtgaactaccaggtggactct
gagagtcgcccgctgcccatgggacccccacccaccccccacttcaccgtgctggctgac
acaccctctggcctcattcccctgaaccacagaccccctccgatcccccctcaacagcag
atgccaaacttcgcagacaaaataaaagacaagtccatcgacctgcagaacttcggcctg
cgctccgacctctacaacaagaaaaatctcaagggtaaaactgtcaactccaccagggac
tggaccgagcaggagactcttctgctgctggaggccctggagatgttcaaggacgactgg
aacaaagtgtcagagcacatcggttcgcgcacccaggacgagtgtatcctgcacttcctg
cggctgcccatcgaggatccgtacatggagagcactgaggcctctctgggccctctggcc
taccagcccatccccttcagccagtctggaaaccccgtcatgagcaccgttgccttcctg
gcctcggtggtggaccccagggtggcgtctgctgcagccagggcagcactagaggaattc
tcccgtgtgcgtgaggaggtgccggctgagctggtggaggctcacgtgaagaaggtgcag
gaggcggcccgcagcaccgggaaggtggaccccgccttcggcctggagagcagcggcatc
gctggcaccgcccccgaggaaccagagaagaccgaaaccccggaggcagagaagatagag
acagacacagactcccagcaggccgataaggcggagttgaaggacgaggcggagaagccc
agcgagtccgcagagaaaagcgacaagaccgaggcagcggacaaggtgaagaaggagggg
tccgagtcgtcggagcgcgaggaggagagtgaagagggaggggaggtcaagacggctcca
gcagacaaagacaaagaggagtccatggagacgtcgtcctcggagccggagaaggacaag
gaggagaaggcagctacagaggagggagaggagaagaggaagaaactcgagcacgacatc
ggagaggggaacatcgccaccgcggccgccgctgctctggcatctgctgccaccaaggcc
aagcacttggcggcggtggaggagaggaagatcaagtccctggtggctctgctggtggag
acgcagatgaagaagctggagatcaagctgaggcacttcgaggagctggagaccatcatg
gaccgggagaaagaggccttggagctccagcggcagcagctgctcaccgagcgccaggcc
ttccacatggagcagctcaaatacgccgagatgaaggcgaggcagcagatggagcagcag
gcggccgccgcggctgccgctgccgcccaggctcaaggacaggctcctggatctggaccc
cacgccgggcaccccggagggcccctgccacaccacggagcgccaatgccccaccatgga
gtggctccacctggtgctgtcatgcacacaggctacccctccatgggacaccaccaaatg
ggacctcaccatcctggacagacaggaccgatgggaccaggccaaccgatcccaggtcgt
atgatgtcaggcccgccctctgccggcgcccctcccggcggcatgcctcccatgatgccc
ccacgccaccctggagctcccaacggcatgtaccccggccccccccctgcacagcctgaa
gcggtccctgtggtgcctgtgggtcctgcagcgcccgccagtggacgagtggctgacaac
taa
DBGET
integrated database retrieval system
