Eleginops maclovinus (Patagonian blennie): 134862070
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Entry
134862070 CDS
T09869
Name
(RefSeq) polyadenylate-binding protein 1A
KO
K13126
polyadenylate-binding protein
Organism
emac
Eleginops maclovinus (Patagonian blennie)
Pathway
emac03015
mRNA surveillance pathway
emac03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
emac00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
134862070
09123 Folding, sorting and degradation
03018 RNA degradation
134862070
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
emac03019
]
134862070
03041 Spliceosome [BR:
emac03041
]
134862070
Messenger RNA biogenesis [BR:
emac03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
eIF4F and regulatory proteins
134862070
mRNA cycle factors
Stress granule specific factors
134862070
Spliceosome [BR:
emac03041
]
Complex C
Other components
Complex C specific factors
134862070
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RRM_1
MLLE
RRM_10
RRM_occluded
RRM_5
RRM_3
YflT
POP1_C
PABC_AtC3H46
Motif
Other DBs
NCBI-GeneID:
134862070
NCBI-ProteinID:
XP_063735822
LinkDB
All DBs
Position
3:26535114..26545462
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AA seq
635 aa
AA seq
DB search
MNPSAPSYPMASLYVGDLHADVTEAMLYEKFSPAGPILSIRVCRDMITRRSLGYAYVNFQ
QPNDAERALDTMNFDVIKGRPLRIMWSQRDPSLRKSGVGNIFIKNLDKSIDNKALYDTFS
AFGNILSCKVVCDENGSKGYGFVHFETHEAAERAIEKMNGMLLNDRKVFVGRFKSRKERE
AELGARAREFTNVYIKNFGDDMDDEKLRELFNQYGPALSIRVMTDDSGKSKGFGFVSFER
HEDAQKAVDEMNGKEYNGRQVYVGRAQKKGERQNELKRKFEQMKQDRMTRYQGVNLYVKN
LDDGLDDERLRKEFTPFGTITSAKVMMEGGRSKGFGFVCFSSPEEATKAVTEMNGRIVAT
KPLYVALAQRKEERQAHLTNQYMQRMATVRAVPNPVLNPYQPAPPSGYFMAAIPQAQNRA
AYYSANQLAQLRPSPRWATQGVRPQHFQNMPNAMRPSAPRPQTFNTIRPTTTPNTQVPRM
MASQRMPTQALSQRPAGSSATAAPVRAMPQYKYAAGVRNPQQHMASQPQVPMQQPAVHVQ
GQEPLTASMLAAAPPQEQKQMLGERLFPLIQNMHPSLAGKITGMLLEIDNSELLHMLESP
ESLRSKVDEAVAVLQAHQAKEAAQKSTTPAGVPSV
NT seq
1908 nt
NT seq
+upstream
nt +downstream
nt
atgaatcccagcgctcccagctatccgatggcttccctctatgtgggagacctgcatgca
gacgttaccgaggctatgctctacgagaaattcagcccggctgggcccatcttatccatc
agagtgtgcagagacatgatcacccgccggtctcttggctatgcctatgtcaacttccag
cagccgaatgacgctgagcgagccctggacacaatgaactttgatgtgatcaaaggcaga
ccactccgcatcatgtggtctcagcgggatccctccctaagaaaaagtggtgtgggcaac
atcttcatcaagaacctggacaagtctattgataacaaagccctctatgacaccttctct
gcatttggaaacatcctttcttgcaaggttgtttgtgatgagaatggctcaaagggttat
ggttttgtccactttgagacccacgaggctgctgagcgggccattgaaaaaatgaatggc
atgttgctcaatgacagaaaagtatttgttggacgctttaagtctcgtaaagagagggaa
gctgagcttggagcccgtgccagagaatttaccaatgtttacatcaagaacttcggggat
gacatggatgacgagaagctgagggagttgtttaaccaatatggacctgcactaagtatc
cgggttatgactgatgatagtggcaagtccaagggatttggcttcgtcagctttgagaga
catgaagatgcacagaaggctgtggacgagatgaatggtaaagaatacaatggccggcaa
gtgtatgtgggccgtgcacagaagaaaggggaacgccagaatgagctcaagcgtaaattt
gagcagatgaaacaggatcgcatgacaagataccagggtgtcaatctttatgtgaaaaac
ctggatgatggcctcgatgatgagcgtctgcgtaaagagttcactccgtttggaaccata
accagtgctaaggtgatgatggaggggggccgcagcaaaggctttggctttgtgtgtttt
tcttccccggaagaggccactaaagctgtaacggagatgaacgggcgtattgttgctaca
aagccgctgtatgtggccctggcccagcgcaaagaggagcgccaggcccacctgaccaac
cagtacatgcagaggatggccacagtccgtgctgtgcccaacccagtgctcaacccatat
cagccggccccaccctcaggctatttcatggcagctatacctcaggctcagaaccgtgct
gcttactactctgccaaccagctggcccagctccgccccagcccccgctgggcaactcaa
ggagtgcgtcctcaacacttccaaaacatgcccaatgctatgcggccctcagctcccagg
ccccagacctttaacaccatccgtcccaccaccacacccaacacacaggttccacgcatg
atggcctcacagcgtatgcccacacaggccctcagccaacgccctgccggatcttcagcc
actgctgctccagtgcgcgccatgccccagtacaaatatgctgctggtgtgcgcaacccc
cagcagcacatggcctcccagccacaggtccccatgcagcagcctgctgtccatgtccaa
ggacaggaaccactgacagcctccatgctggccgccgcccctcctcaggaacagaagcag
atgctgggtgagcgtctgttccccctgattcagaacatgcaccccagtttggctggcaag
atcaccggtatgctgctggagatcgacaactctgaactgctccacatgctggagtcgcct
gagtccctgcgctcaaaggtggatgaggctgttgctgtgctgcaggcccaccaggccaag
gaggctgctcagaagtcaaccacccccgctggtgtccccagtgtctaa
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