Eleginops maclovinus (Patagonian blennie): 134862346
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Entry
134862346 CDS
T09869
Symbol
rorc
Name
(RefSeq) nuclear receptor ROR-alpha B isoform X1
KO
K08532
RAR-related orphan receptor alpha
Organism
emac
Eleginops maclovinus (Patagonian blennie)
Brite
KEGG Orthology (KO) [BR:
emac00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
emac03000
]
134862346 (rorc)
09183 Protein families: signaling and cellular processes
03310 Nuclear receptors [BR:
emac03310
]
134862346 (rorc)
Transcription factors [BR:
emac03000
]
Eukaryotic type
Zinc finger
Cys4 thyroid hormone receptor-like
134862346 (rorc)
Nuclear receptors [BR:
emac03310
]
1. Thyroid hormone like
1F. RAR-related orphan receptor
134862346 (rorc)
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Gene cluster
GFIT
Motif
Pfam:
zf-C4
Hormone_recep
Vir_act_alpha_C
Motif
Other DBs
NCBI-GeneID:
134862346
NCBI-ProteinID:
XP_063736286
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Position
3:complement(11320338..11337945)
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AA seq
502 aa
AA seq
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MEYEELDVPPTDNPIKREGAVSKKTHLTQIEVIPCKICGDKSSGVHYGVITCEGCKGFFR
RSQLPTVSYSCSRQNNCQIDRASRNRCQHCRLQKCLAQGMSRDAVKFGRMSKRQRDSLIA
EVERHRQQQQQQLQEDTPSLLSFPTKARQDRSAQLLQPMASTYSFTGESELLSYTADVHP
YLMCSPNESQVSGMIYRGSAVSPTSRSQGRGDNSGLPESGFDSRQPTHDLVAIHPYSPLE
DPYSLYPHSLRNIDELCASIVRSHRETTQYRAEELQALRWKVLSREEIQAYQSKSVDDMW
QHCAIRLTDAVQYVVEFAKHIPGFRMLSQNDQIALLKTGSMEVVLVRMCRYFNTENNTVF
FDGKFAGVEVFKSLACGDLITAVFDFAHNMCALKLTEQQIALFSALVLINTERPCLEDRT
RVQRVQRSVEFGLSHILHRDNQESLLHKLYQRMAVLRSLCSLHMEKLRWFSQRYPLTAHS
LFPPLYKELFACEAEQLPGTTH
NT seq
1509 nt
NT seq
+upstream
nt +downstream
nt
atggaatatgaggagctcgacgtgccccccactgacaaccctatcaaaagagaaggagcc
gtgtccaagaagactcatttgacccagattgaagttattccatgtaagatctgtggggat
aagtcctctggagtccattatggagtcatcacttgtgagggctgcaagggatttttccgg
cgtagccagctgcctactgtttcctactcctgctccaggcagaacaactgtcagatcgac
cgggccagccgcaaccgctgccaacactgccgcctgcagaagtgcttagcacagggcatg
agcagagatgctgtcaagttcggacggatgtccaaacgtcagcgggactccctgattgct
gaagtggagaggcaccgacagcagcagcagcagcagcttcaggaagacaccccgtctctc
ttgtccttccccaccaaggcccgtcaagaccgctcagcgcaactccttcaacccatggcc
tccacctactccttcaccggggagtccgagctgctgtcctacacggctgatgtccaccct
tacctgatgtgctccccgaatgagtcccaggtgtcgggtatgatctaccgaggctctgct
gtgtctcccacgtcgagatcccaggggaggggcgacaacagcggactccctgaaagcgga
tttgactccagacagccaactcatgatctggtggcgattcacccctacagccctctggag
gatccttacagcctctatcctcactctttgagaaacatcgatgagctgtgtgccagcatt
gtgcgctcccacagagagaccactcagtacagggcagaggagctgcaggctctcagatgg
aaagtgctcagcagagaggagatccaagcctaccagagcaaatcagtggatgacatgtgg
cagcactgtgccatccgactgactgatgctgtccagtatgtggtggagtttgcgaaacac
atcccaggttttcgtatgctcagccagaacgaccagatagctctcctgaagaccggctct
atggaggtggttctagtccggatgtgtcgctacttcaacacagagaacaacaccgtcttt
ttcgatgggaaatttgctggagttgaagtcttcaagtctctggcatgtggtgatttaatc
acagcagtgtttgactttgctcacaatatgtgtgctctcaagctcactgagcagcagatc
gctctcttcagtgctctggtgctgatcaacacagagcgtccatgtctggaggacagaacc
agagttcaacgagtgcaaagaagcgtggagtttggactctcacacattctccaccgagac
aatcaagaaagtctattgcacaagctgtaccagaggatggcagtgctgcgttcactgtgc
agtctgcacatggagaagctgcgctggttcagtcagcgttacccactcaccgctcactct
ctgttccctcctctttacaaggagctgtttgcctgcgaggctgagcagctgccgggaacc
actcactga
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