KEGG   Eleginops maclovinus (Patagonian blennie): 134862393
Entry
134862393         CDS       T09869                                 
Symbol
dcaf13
Name
(RefSeq) DDB1- and CUL4-associated factor 13
  KO
K11806  DDB1- and CUL4-associated factor 13
Organism
emac  Eleginops maclovinus (Patagonian blennie)
Brite
KEGG Orthology (KO) [BR:emac00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03009 Ribosome biogenesis [BR:emac03009]
    134862393 (dcaf13)
   04121 Ubiquitin system [BR:emac04121]
    134862393 (dcaf13)
Ribosome biogenesis [BR:emac03009]
 Eukaryotic type
  90S particles
   Other 90S particles
    134862393 (dcaf13)
Ubiquitin system [BR:emac04121]
 Ubiquitin ligases (E3)
  Multi subunit type E3
   Cul4 complex
    Target recognizing subunit (DCAF)
     134862393 (dcaf13)
SSDB
Motif
Pfam: Sof1 WD40 WD40_Prp19 WD40_CDC20-Fz Beta-prop_EML_2 WD40_WDHD1_1st WDR55 Beta-prop_CAF1B_HIR1 EIF3I Beta-prop_EML Beta-prop_TEP1_2nd Beta-prop_WDR90_POC16_2nd Beta-prop_EIPR1 WD40_MABP1-WDR62_2nd Beta-prop_WDR75_1st Beta-prop_RIG_2nd WD40_RFWD3 Beta-prop_IFT122_1st Beta-prop_IFT140_1st eIF2A ANAPC4_WD40 NBCH_WD40 KNTC1_N Beta-prop_IP5PC_F Beta-prop_NUP159_NUP214 Beta-prop_WDR35_TULP_N Beta-prop_WDR19_1st Beta-prop_SCAP
Other DBs
NCBI-GeneID: 134862393
NCBI-ProteinID: XP_063736381
LinkDB
Position
3:21334475..21345033
AA seq 445 aa
MKVKVLSRNPDDYVRETKLDIQRVPRNYDPSLHPFEVSREYTRALNATKLERVFAKPFLA
SLDGHRDGVNCMAKHTTNLSTLFSGSCDGEVKVWNLTKHECVRTLQAHEGFVRGMVVRHC
GTSFFTVGDDKTIKQWKMEAPAYGEEEEPLNTILGKTVFTGLDHHRKEGVFATCGQQVDV
WDEQRSSPIRSFTWGVDSFSAVRFNPVETELLASCASDRSIVLYDMREPAPLKKVIMTMR
SNTVCWNPMEAYYFTCSNEDYNLYTYDMRYLDRPITVHMDHVSAVLDVDYSPTGKEFVSA
SFDKTIRIFPKDGGHSREVYHTKRMQHVICIKWSADNKYILSGSDEMNIRLWKANAAEKL
GVLAPRERQATNYNQKLKEKYQHHPQIRRIAHHRHLPRNIYHQTKEQRVMKEARRRKERN
VRKHSKPGTVPVVSEKEKHVVTVVK
NT seq 1338 nt   +upstreamnt  +downstreamnt
atgaaagttaaagtcctctcgaggaacccggatgattatgtccgcgagacaaaactagat
atccagcgtgttccaagaaactatgacccatccctccatccgtttgaggtgagcagagag
tacacccgggccctgaatgccaccaagcttgagagggtgtttgccaagcccttcttggcc
tctctggatggacacagagatggggtgaactgcatggccaagcacaccacaaacctctca
acccttttctctggctcctgcgatggggaggtgaaagtgtggaatctgacaaagcatgaa
tgcgtccgcactctgcaagcacatgaaggttttgtccgtggaatggtcgtacgccattgt
ggaacatccttctttacggttggtgacgacaaaacaatcaagcaatggaaaatggaggcg
ccagcttacggagaggaagaggagccgctcaacactattctgggcaagacagtatttaca
ggactggaccatcacaggaaggagggtgtgttcgcaacatgtggccagcaggtggacgtg
tgggacgagcagaggagcagcccgatccgctccttcacctggggcgtggacagcttcagt
gccgtccgcttcaaccctgtggagactgaactcctcgctagctgtgcctctgacagaagt
atagtgctgtatgacatgagagaaccagcacctcttaaaaaggttattatgacaatgagg
agcaacacagtatgctggaaccctatggaagcctattacttcacatgttcaaatgaagac
tacaacctctacacatacgacatgaggtacctggaccggccgatcacagtgcacatggat
catgtctctgcagtgctggatgtggactattccccaactgggaaggagttcgtatctgcc
agttttgacaaaaccatccgcatcttccccaaggacggaggccacagtagggaagtctac
cacaccaagcgcatgcagcatgtcatctgcataaagtggtccgcagacaacaaatacatc
ctgagcggttctgatgaaatgaacatccgactatggaaagccaacgctgctgagaagcta
ggagtgctcgcccccagagaaaggcaggccactaactacaaccagaagctgaaagagaag
taccagcaccacccgcagatcagacgcatcgcacaccaccgacacctccccaggaacatc
tatcaccagaccaaggagcagcgggtcatgaaagaggctcgccgcaggaaggagaggaac
gtgcggaagcacagcaagcctggaactgttcctgtggtgtcggagaaagagaagcatgtt
gtgactgtggtcaaataa

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