Eleginops maclovinus (Patagonian blennie): 134862568
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Entry
134862568 CDS
T09869
Symbol
cstf3
Name
(RefSeq) cleavage stimulation factor subunit 3
KO
K14408
cleavage stimulation factor subunit 3
Organism
emac
Eleginops maclovinus (Patagonian blennie)
Pathway
emac03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
emac00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
134862568 (cstf3)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
emac03019
]
134862568 (cstf3)
Messenger RNA biogenesis [BR:
emac03019
]
Eukaryotic type
mRNA processing factors
3' end processing
Cleavage stimulation factor (CSTF) complex
134862568 (cstf3)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Suf
HAT_PRP39_N
HAT_PRP39_C
HAT_Syf1_CNRKL1_N
TPR_14
TPR_6
TPR_19
Motif
Other DBs
NCBI-GeneID:
134862568
NCBI-ProteinID:
XP_063736635
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Position
4:complement(14504606..14514434)
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AA seq
717 aa
AA seq
DB search
MATDGAAADQTAAEYIPEKVKKAEKKLEENPYDLDAWSILIREAQNQPIDKARKTYERLV
TQFPSSGRFWKLFIEAEIKAKNYDKVEKLFQRCLMKVLHIDLWKCYLSYVRETKGKLPSY
KEKMAQAYDFALDKIGMEIMSYQIWVDYINFLKGVEAVGSYAENQRITAVRRVYQRGCVN
PMINIEQLWRDYSKYEEGINVHLAKKMIEDRSRDYMNARRVAKEYETVMKGLDRNAPSVP
PQNSPQEAQQVDMWKKYIQWEKSNPLRTEDQTLITKRVMFAYEQCLLVLGHHPDVWYEAA
QYLEQSSKLLAEKGDMNNSKLFSDEAANIYERAIGTLLKKNMLLYFAFADYEESRMKYEK
VHSIYNKLLAIEDIDPTLVYIQYMKFARRAEGIKSGRTIFKKAREDLRTRHHVYVTAALM
EYYCSKDKSVAFKIFELGLKKYGDIPEYILAYIDYLSHLNEDNNTRVLFERVLTSGSLSA
EKSGEIWARFLAFESNIGDLASILKVERRRFTAFKDEYEGKETALLVDRYKFMDLYPCSA
SELKALGYKDVSRAKLAALLPETVVTPSTPAQKDEADRKPEYPKPDTNQMIPFQPRHLAP
PGLHPVPGGVFPVPPAAVVLMKLLPPPTCFTGPFVQVDEMMELFRRCTLPETVEAAVELI
TGKQPDAGGEGNGSLENHAVAKSLKRPNADSDEEDDKGAVAPPIHDIYRSRQQKRIR
NT seq
2154 nt
NT seq
+upstream
nt +downstream
nt
atggctaccgatggagcagcagccgaccagacagcggctgagtatattccagagaaggtg
aagaaggcagagaagaagttggaagaaaacccatatgaccttgacgcatggagcattctg
attcgagaagcacagaaccaaccgatagataaagcaaggaagacttatgagcgacttgtc
acgcagttcccaagttctggtcgattctggaaactattcattgaagcagagatcaaggct
aaaaactatgacaaggtagaaaagttgtttcagagatgcctaatgaaagtcttgcacatc
gacctgtggaaatgttacctctcatatgttcgagagaccaaaggaaagctgcccagttac
aaagagaagatggcccaggcgtatgacttcgcattagataaaatcggcatggaaatcatg
tcttatcagatttgggtggactacattaacttcctcaaaggagttgaggctgtaggctca
tatgcagagaaccagcgcatcactgcagtacggagggtgtaccagaggggctgtgtgaac
cccatgatcaacattgagcagctctggagagattatagcaaatatgaggagggaatcaac
gtgcacctggccaaaaagatgattgaggaccggagtagagactacatgaatgccagaaga
gttgcaaaggaatatgagactgtgatgaaggggttggacaggaacgcaccttcagtaccg
ccccagaactcccctcaggaagcccagcaagtggacatgtggaagaagtacatccagtgg
gaaaaaagcaacccactgcgcacagaagaccagaccctcatcacaaagagagtgatgttt
gcctatgagcagtgcctgctggtgctgggccaccatcctgacgtctggtacgaggcagca
cagtacttggagcagtccagcaagctgctggcagagaaaggggacatgaacaattcaaag
ctgttcagtgacgaggctgctaacatctatgaacgtgccatcgggactcttctgaagaag
aacatgctgctgtactttgcatttgccgactatgaagagagccgcatgaagtacgagaaa
gttcacagcatctacaacaaactgctggccattgaggatatcgaccccacgctcgtctac
attcagtatatgaagtttgccagaagggcggaaggcatcaagtcgggtcgaaccatcttc
aaaaaggcccgagaggatctgcgcacacgtcaccatgtgtatgtgactgcagcactgatg
gagtactactgcagcaaggataaatcagtggccttcaagatctttgagcttggtttgaag
aaatacggtgacattccagagtacatccttgcatacattgattacctctcgcatcttaac
gaggataacaacacaagggttctgtttgaacgtgtcctcacatcaggaagcttgtcagca
gaaaaatcaggtgagatctgggctcggtttctggctttcgagagcaacataggagacctt
gccagtatcctgaaagtggagcgcaggcgtttcactgccttcaaagacgagtatgagggc
aaagaaacagccttgcttgtagatagatacaagttcatggacctgtatccctgctctgct
agtgaactcaaggcccttggatacaaggatgtttctcgagccaaactggcagcgctgcta
ccggagaccgtggtgacgccctctacgccggcacagaaggatgaagctgaccgtaaacct
gagtaccccaaacctgacaccaaccagatgattcccttccagccacgtcaccttgctcct
ccaggtttacaccctgtccctggaggagttttcccagtccccccagctgctgttgtccta
atgaagctgcttcctccgcctacgtgcttcactggaccctttgttcaagtggatgagatg
atggaattattcaggagatgcacacttcctgagactgttgaagctgctgtagagctgatc
actggtaaacagccagatgcaggaggggagggcaatggctccttggagaaccatgctgtt
gccaagtcactgaagaggcctaacgcagactccgacgaggaggatgacaaaggagctgtg
gctccacccatacacgacatctaccgttcacgccaacagaagaggattcgataa
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