Eleginops maclovinus (Patagonian blennie): 134862599
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Entry
134862599 CDS
T09869
Symbol
col2a1a
Name
(RefSeq) collagen, type II, alpha 1a
KO
K19719
collagen type II alpha
Organism
emac
Eleginops maclovinus (Patagonian blennie)
Pathway
emac04510
Focal adhesion
emac04512
ECM-receptor interaction
emac04518
Integrin signaling
Brite
KEGG Orthology (KO) [BR:
emac00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
134862599 (col2a1a)
04518 Integrin signaling
134862599 (col2a1a)
09140 Cellular Processes
09144 Cellular community - eukaryotes
04510 Focal adhesion
134862599 (col2a1a)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
00536 Glycosaminoglycan binding proteins [BR:
emac00536
]
134862599 (col2a1a)
Glycosaminoglycan binding proteins [BR:
emac00536
]
Heparan sulfate / Heparin
Extracellular matrix molecules
134862599 (col2a1a)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Collagen
COLFI
VWC
VWC2L_2nd
SNARE
Amnionless
Motif
Other DBs
NCBI-GeneID:
134862599
NCBI-ProteinID:
XP_063737038
LinkDB
All DBs
Position
1:20547232..20569422
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AA seq
1487 aa
AA seq
DB search
MFGFVDSRTVLLLVASQVVLLAVVRCQEEADQEAGGCIQDGQQYNDKDVWKPEPCRICVC
DSGAVLCDEIICEEIKECANPLIPSGECCPICPADASAPIETLGAKGQKGEPGDIADVVG
PKGPPGPMGPSGEQGSRGEAGAKGDKGNAGPRGRDGEPGIPGNPGPAGAPGQPGLGGNFA
AQMAGGFDEKAGGAQMGVMQGPMGPMGPRGPPGPSGAPGPQGFQGSPGEAGEPGPAGALG
PRGPPGPSGKPGSDGDAGKPGKAGERGPAGPQGARGFPGTPGLPGIKGHRGHPGLDGAKG
ETGAAGAKGESGSAGENGAPGPMGPRGLPGERGRSGAAGSAGARGNDGLPGPAGPPGPLG
PAGAPGFPGSPGSKGEAGPTGVRGSEGAQGPRGEAGTPGSPGPSGASGNPGTDGIPGAKG
SFGAAGIAGAPGFPGPRGPPGPQGATGSLGPKGQSGDPGLPGFKGEAGPKGELGPVGPQG
GPGPSGEEGKRGARGEPGTAGPLGPPGERGAPGNRGFPGQDGLAGAKGALGERGVPGAAG
PKGSGGDPGRTGESGLPGARGLTGRPGDAGPQGKVGAPGANGEDGRPGPPGPLGARGQPG
VMGFPGPKGANGEAGKTGEKGLVGRPGLRGLSGKDGETGAAGPSGPAGPAGERGEQGQPG
PNGFQGLPGPTGAPGEGGKPGDMGVPGEAGANGAVGPRGERGFPGERGGAGAQGLQGPRG
LPGTPGSDGPKGAIGPSGSAGSQGPPGLQGMPGERGTGGISGAKGDRGDNGQKGPEGAPG
KDGGRGLTGPIGPPGPSGPNGAKGETGASGPTGAGGARGAPGDRGEGGPPGPAGFAGPPG
SDGQPGAKGELGESGQKGDGGAPGPQGPSGAPGPVGPTGVSGPKGARGAQGAAGATGFPG
AAGRVGTPGPNGNPGAAGPSGPAGKDGPKGARGDAGLPGRQGDAGLRGAPGSQGEKGEAG
EDGPLGPDGPSGPQGLGGSRGIVGLPGQRGERGFAGLPGPSGEPGKQGSTGSGGDRGPPG
PVGPPGLTGPSGETGREGTPGSDGPPGRDGSTGVKGERGNTGPAGAPGAPGAPGSTGPVG
PLGKQGDRGEGGAQGPAGPSGPAGARGMAGPQGPRGDKGEAGETGERGQKGHRGFTGLQG
LPGPPGSAGDAGSAGPAGPNGAKGPGGPSGPAGKDGSNGTPGPIGPPGPRGRSGESGPAG
PPGNAGPPGPPGPPGPGIDMSAFAGLGQTEKSPDPLRYMRADEASSSLRQHDVEVDSSLK
SLNNQIENLRSPDGSQKNPARTCRDLKLCHPEWKSGTYWVDPNIGCTADAIKVFCNMETG
ETCVTPSIAEVPKKNWWTTKSKDRKHVWFGETMNGGFHFSYADDGPIANTGNVQLTFLRL
LSNEASQNVTYHCKNSVAYMDQATGNLKKALKLQGSNDVEIRAEGTSRFTYTVMEDGCKK
HTDRWGKTVFEYKTQKTSRLPFVDIAPMDIGGADQEFGVEVGAVCFL
NT seq
4464 nt
NT seq
+upstream
nt +downstream
nt
atgtttggctttgtggattcaaggactgttctgctacttgtagcatcccaagttgtttta
ctagccgtcgtcagatgtcaggaggaagctgaccaggaggcaggtggctgcatccaggac
ggccagcagtataatgataaggatgtgtggaagcccgagccgtgtcgtatctgtgtgtgc
gacagcggagcggttctgtgtgatgagataatctgcgaggagatcaaagaatgtgccaac
cctctcatcccatctggagagtgctgtcccatctgccctgctgatgccagtgcccccatt
gagacactcggtgcaaagggccaaaaaggagaaccaggagatattgcagatgttgtagga
ccaaaaggaccaccaggcccaatgggcccctcaggtgagcagggatcacgcggagaagct
ggcgctaagggtgataagggaaatgcaggacctcgtggaagagatggcgagcccggcatc
cccggaaaccccggacccgccggtgcacctggacaaccaggacttggagggaactttgct
gctcagatggctggaggttttgatgagaaggctggaggcgctcagatgggtgtgatgcag
ggaccaatgggtcctatgggtccccgtggtccccccggaccaagtggagctcctggccca
caaggtttccaaggttcccctggagaggctggagagcccggcccagctggagcattggga
ccacgtggaccacctggaccttctggaaaacctggaagcgatggtgatgctggcaaacct
ggcaaagctggtgagcgtggacctgcagggcctcagggagctcgtggattccctggaact
cctggacttcccggaatcaaaggacacagaggtcatcctggtctggatggagctaaggga
gaaactggtgccgcaggagccaagggagagtctggttctgctggagagaacggcgccccc
ggacccatgggaccacgaggtctgcctggtgagagaggtcgctccggagctgctgggtct
gctggtgcccgtggtaatgatggtctgcctggtcctgctggtccacctgggcctcttggt
cctgctggagctcccggtttcccaggatccccaggatctaagggagaagctggtcctact
ggagtccgtggatctgaaggagcacagggacctcgcggagaggccggtacccccggatct
ccaggaccctccggagcatctggtaaccctggtactgatggtattcctggagctaaagga
tcttttggtgctgctggtattgctggtgctcctggtttccctggaccccgtggcccaccc
ggacctcagggagctacaggatctcttggaccaaagggacagtctggagaccctggtctt
cctggattcaaaggagaagctggacccaaaggagagcttggccctgttggtccccaaggt
ggccccggaccctctggtgaagaaggaaagagaggagccagaggagagcctggaacagcc
ggacccctcggacctccaggagagagaggagctcccggtaaccgtggtttcccaggtcag
gatggtcttgctggtgctaagggcgcccttggtgagcgtggtgttcctggtgctgctggg
cccaaaggtagcggtggagaccccggacgcacaggagagtccggtctgcccggagctaga
ggtcttactggtcgccccggagatgctggtcctcaaggcaaagttggagcccctggagct
aatggtgaggatggtcgccccggaccccccggccctctgggagcccgtggacagccagga
gtgatgggattccccggaccaaagggagccaatggtgaagctggaaagacaggagagaag
ggtcttgttggtcgtcctggactaagaggtctttctggaaaagatggtgagactggtgct
gctggaccttccggccctgctggacctgctggagagagaggagagcaaggacagcctgga
cccaacggcttccagggtctgcccggacccactggagccccaggagagggtggaaagccc
ggagacatgggagttcctggagaggctggagctaatggtgctgttggacccagaggtgag
cgtggtttcccaggagagagaggaggtgctggagctcagggtctgcagggacctcgtgga
cttcctggtacacctggaagtgatggacccaagggagccattggaccgtctggttctgct
ggatctcagggaccccccggcctgcagggtatgcccggagagagaggaactggtggcatc
agtggagccaagggagacagaggtgacaacggacagaagggacctgaaggagctcctgga
aaggacggtggtagaggtttgaccggtcccattggtcctcctggcccatccggacccaat
ggcgccaagggtgagactggagcttcaggacctactggtgctggcggtgctcgtggtgct
cctggtgaccgtggtgagggcggtcctcctggccctgctggttttgctggacctcctggt
tcagatggtcagcctggtgccaagggagagctcggagagtctggacagaaaggagatggt
ggagctcccggacctcagggaccatctggagctcctggacctgtgggacctactggtgta
tctggacccaaaggagcgcgtggtgctcagggagctgctggtgctactggtttccccggt
gctgctggtagagttggaactcctggccctaatggtaaccctggtgctgctggtccttct
ggccctgctggtaaagacggacctaagggtgctcgtggtgatgccggactcccaggaaga
cagggagacgctggacttcgtggagctccaggctcacagggagagaagggagaagcagga
gaggatggacctcttggtcccgatgggccttcaggacctcagggtctgggtggatctcgt
ggtattgttggtttgcctggtcaacgtggagagagaggtttcgctggtctccctggacct
tcaggagagcctggtaaacaaggatctactggttctggtggcgaccgcggaccccctgga
cctgtgggacccccaggactgactggaccttctggagagactggacgagagggtactcct
ggatccgatggaccccctggtagagatggatctactggagtcaagggagagagaggaaac
accggacccgctggtgcacctggagctcctggagcccccggatccactggacccgtcgga
cccctcggaaagcagggagacagaggagagggtggtgctcaaggacctgcaggaccatct
ggacccgctggagccagaggaatggctggaccccaaggaccccgtggagacaagggagag
gctggtgagactggagagagaggacagaagggtcaccgtggattcactggtctgcagggt
cttcctggacctcctggctccgctggagacgctggatctgctggacctgccggaccaaac
ggagctaagggacctggtggaccatctggacctgctggcaaagatggatcaaatggaaca
cccggcccaatcggaccccctggacctcgtggacgttctggagaaagtggcccagctggt
cctcccggaaacgctggacccccaggccctcccggtcctcctggccccggcatcgacatg
tctgccttcgccggtctgggtcagactgagaagtcccctgatcctctgaggtacatgagg
gccgatgaggcctccagctccctgaggcagcacgacgttgaggtcgattcctctctgaag
tccctcaacaaccagatcgagaacctgcgcagccctgacggctcccagaagaaccccgcc
cgcacctgcagagacctgaagctgtgccaccctgagtggaagagcggcacctactgggtt
gaccccaacattggctgcactgctgatgccatcaaggtgttctgtaacatggagactgga
gagacctgtgtgaccccaagcattgccgaggtgccaaagaagaactggtggactaccaag
agcaaggaccgcaaacacgtctggttcggagagaccatgaatggaggattccacttcagc
tatgctgatgatggccctattgccaacactggcaatgttcagctgaccttcctgaggctc
ctgtccaatgaggcatcccagaacgttacttaccactgcaagaacagcgtggcctacatg
gaccaggccactggcaacctgaagaaggctctgaagctgcagggatccaacgatgtggag
atccgcgctgagggcaccagtcgcttcacatacaccgtgatggaggatggctgcaagaaa
cacacagaccgatggggcaagaccgtctttgagtacaaaacacagaaaacctcccgtctg
ccattcgtggacattgctcccatggacatcggaggagcggatcaggagttcggagtggaa
gtaggcgcagtctgcttcttgtaa
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integrated database retrieval system
