Eleginops maclovinus (Patagonian blennie): 134862917
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Entry
134862917 CDS
T09869
Symbol
chd9
Name
(RefSeq) LOW QUALITY PROTEIN: chromodomain-helicase-DNA-binding protein 9
KO
K14438
chromodomain-helicase-DNA-binding protein 9 [EC:5.6.2.-]
Organism
emac
Eleginops maclovinus (Patagonian blennie)
Brite
KEGG Orthology (KO) [BR:
emac00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
emac03036
]
134862917 (chd9)
Chromosome and associated proteins [BR:
emac03036
]
Eukaryotic type
Chromatin remodeling factors
Other chromatin remodeling factors
134862917 (chd9)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SNF2-rel_dom
HTH_CHD6-9
BRK
Helicase_C
Chromo
ResIII
DEAD
HTH_CHD1_Hrp3
HDA2-3
Chromo_MIT1
Motif
Other DBs
NCBI-GeneID:
134862917
NCBI-ProteinID:
XP_063737123
LinkDB
All DBs
Position
4:complement(8904888..8973990)
Genome browser
AA seq
3049 aa
AA seq
DB search
MLSQARQQQQRWRAAAPCSPAGVQLTTQSQVGRKHTLCGGGWSCFLGSISGTLFNGHAVA
HSEAHWNQLGSSGVSKGSRYPPGFAMDFFNDPSLFVGGLEGLEEDGFPSAPSLVDELNLT
ADFEPLQVEPLDPGKHQDMMPPVTTQQAMPAYSQQMGHYIGIKAQNPMSQAFSGSGATGS
GGGGMITDQHVQYHNAARSQVPQSNGLFCSSSSPMWGNQDQNGNIYHPLSHEQQQLCRQQ
QQQQQQQQHNQQLHVRRQQTQQQHHPCHQQQEQQQHRMQQSHQQQLLNQHRQISTHAMSL
QQQHFSFHQGGQSQSQQQGHHSQQQAQHQLAVGGPRFHSTAMPSKSYMDGQTASLSGTCL
QPQQQQGSYQFTRGGGGPEDPNLPFPMHSSSRVHSLTAAYQAAQYPAYPGEPEIPSLSQQ
SLTTDSVSMPSTPTASLSTTVPELSGTLCPFPSTAVMRTPVSLAEECPFRALRCSGETQG
NCKSSEMFGESMICYPSLASQLPSEQPQSCGAINTNGYQALGDNLLPPQAQDGDLEGLEP
PDLLPDLLPQLEAALSQQHESNHSWVDSSHETGREHKKPLVEYKEEKPRKNANGPSSQVR
VLSPPMKSSSSSSSSSSSSSSSSSSSSEKRTSRRTHTQMELGTLDKQEKANRIISEAIAK
ARQRGEKNIPRVMSPESFPSSSSQHKHRKREHKGNGKARAKEKACRKARIVPSSKNKQKA
KIGKIVIKIGKKKKRKQESSEESDDDPPSRYTSKDDDSKRRSNRQVKRKKYAEELEARLS
DDEVKMMAKAKKTSSGGSKQPAVQLFVENPSEEDAAVVDKIMSSRIVKKEVSPGVVVEDE
EFFVKYKNYSYLHCEWATEQQLEKDKRIPQKIKRFKLKQAQRALFFADMEEDPFNPDYVE
VDRVLEVSYCEDKDTGEEVVYYLVKWSSLAYEDSTWELKDDVDQSKIEEFEQLQAVKPDS
RRMERPPANLWKKRDQSREYRNGNSLRDYQLEGVNWLLFNWYNRRNCILADEMGLGKTIQ
SITFLEEIYRVGIKGPFLIIAPLSTIANWEREFRTWTYLNVIVYHGSMVSRQMLQQYEMY
FRDAQGRVMRGAYKFQAVITTFEMILGGCPILNAIEWRCVIIDEAHRLKNKNCKLLEGFK
LMNLEHKVLLTGTPLQNTVEELFSLLHFLEPARFPSEVTFMQEFGDLKTEEQVQKLQAIL
KPMMLRRLKEDVEKKLAPKEETIIEVELTNIQKKYYRAILEKNFSFLAKGAGQANMPNLV
NTMMELRKCCNHPYLIKGAEEKILEDFREVHNPNALDFHLQAMVQSAGKLVLIDKLLPKM
KAGGHRVLIFSQMVRCLDILEDYLIQRRYLYERIDGRVRGNMRQAAIDRFSKPDSERFVF
LLCTRAGGLGINLTAADTCIIFDSDWNPQNDLQAQARCHRIGQNKAVKVYRLITRNSYER
EMFDRASLKLGLDKAVLQSMSGRDNSLGGGTGGGAPQQQQQLSKKEIEDLLRRGAYGAIM
DEEDEGAKFCEEDIDQILQRRTKTITIESEGRGSTFAKASFVASGNRTDISLDDPNFWDK
WAKKADVDMEMANGRNSLVIDTPRVRKQTRPFSATKDELAELSEGNSDSDDSKPKLRRNH
DRLNSYGRTECFRVEKNLLVYGWGRWKDILNHGRFKKQLTERDVESICRALLSYCLVHYR
GDDKIKSFMWDLIAPSEDGRTKELQNHLGLSAPVPRGRKGKKMKIQSSSFDIHKAEWLRK
HNPEHMLQDDGYKKHLKHHCNKVLLRVRMLYYLKQEVIGSQAQRVLDGEDSSEIKIWVPD
PDHSELPALWWDAIADKCLLLGVYKHGYEKYNTLRADPTLCYLERVGRPDEKAIAAEQRG
NDFMDGDVDDPEYKPAPALLKDDMEDDASSPGDLVVTDSAGDAVPVTGSQTSYWPSPSVL
TARLRRLITASQRFTKSRQILQIHQTQIPSPSTMMLSAPLCPLPPTLNDTLNPKMVAKIE
RQQRWTRREEADFYRVVSTFGVVFDPSLGRFDWTKFRAMARLHKKTDESLQKYLCAFTAM
CRRVCRLPPKEGDAAVEPSLNIQPITEERASRTLYRVELLRQVREQVLRHELLYERLLLC
QMSSDLPVWWEAGTHDRDLLIGAAKHGVSRTDYHILRDPELSFMAAQRNYSQTKTAQQHS
RTPTPLLHPQCQASSSTLTGSPLPPPTHRDAEVGGVVPKVEPASEGEEAQEKQGEGWSPT
RAPATPTGLEEKPLCELEAARTKPLTPNSSERKPKKSKKSRREAKRGSESDSDGSSSSSS
SHSSSTSSSSSSSTSHSGSSSSSSSSSCSSGSSSSSSSSSSSSDDSDSEGEEGKKKVPAA
AIVKGFDEDSVASLSTMQDETQDTHTAENGIANNSSHPFQGGGYMLAASYWPKDRVIINR
LDSICQAVLKGKWPGTRRVYEPGGAVASFYTTKLLDNANSLCEDPSASPQGSKVTKHVAE
NKEFSVKLNDQEGGLKLTFQKQGLPLKRPLESEEGPQAQQQYLARLQELQSASDTGLADI
TKPQCSFQSTPPCLPGQMRLNGALDGQPVVKRRRGRRKNVEGMDLLLMNRSRVPAVPDQL
PPGWGGIGQVGMAVAPLPGFSQSSSQAPADTDTRVPVINLKDGTRLAGEDAPRRKDLEQW
LMEHPGFVADTGAFIPGVNKMPMQFHFQDGRPKQKRHRCRNPNKIDVNSLTGEXRVQIIN
RRNARKVGGAFAPPLKDLCRFLQENPEYGVPPEWADVVKQSGYLPESMFDRILTGPIVPE
EVSRRGRRPKNPLAKAAAAAASAPNPAASALGLNPLLANGLLSGMDLSSLQAFQQNLQSL
QSLQLTAGLMGLPSDASNLAASNLAAMFPMMLSGMAGLPNLIGMSSLLGKPAQEGAGGFE
EKTKGSSSGAAGEPSASKAPPHTSEPKGERTEGSNSTPSSTSSSSSSAPQSASAASSLSL
NPLLLSSMLYPGMLLTPGLNPPTQPQSSNSDPPHPPAPLPPAGSSQEIAQLAAERDAEDD
DEALEDDDEEEDDSAEQKENSGPDGSGKAESSSSESGSSSSSDDSDSSD
NT seq
9150 nt
NT seq
+upstream
nt +downstream
nt
atgttatcacaggcacgtcagcagcagcagaggtggagagccgctgcgccgtgttcgcca
gcaggagtacaactaacaacacagtcacaagttggccgaaaacacactctctgcggtggc
ggctggagttgctttttggggtcaatttcaggtacactatttaacggacatgctgtagct
cacagtgaggctcattggaaccagcttggatccagtggagtttccaaaggttcccgttat
cctccgggctttgccatggacttctttaatgacccaagcctctttgttggaggtttggaa
gggctggaagaggatggcttcccttcagcaccctcacttgtggatgagctaaatctcact
gctgactttgagcccctccaagtggagcctctagacccagggaagcaccaggacatgatg
ccaccagtaactacccaacaagccatgcccgcgtacagtcagcagatgggtcattacatt
ggcattaaggcacagaatcctatgagtcaagcattttctggttctggggccacaggtagc
ggaggaggtggcatgattacagaccaacatgtccagtaccataatgctgccagaagccaa
gtacctcagtctaatgggctgttctgtagcagcagtagtcccatgtggggcaaccaggac
cagaatggaaacatttaccacccgttatctcatgagcaacaacagctttgtcgtcagcag
cagcagcagcagcagcagcagcagcacaaccagcaactccatgtcagacgacaacaaaca
cagcagcaacaccacccgtgtcatcaacaacaggagcaacagcagcacagaatgcagcaa
agccatcagcaacagctgttgaaccagcaccgacaaattagcacccatgcaatgtcccta
cagcagcaacacttttcttttcaccaaggaggtcaatctcaaagtcaacagcaaggtcac
cattctcagcagcaggctcagcaccaactcgctgtcggaggaccaaggtttcattcaacg
gctatgccaagtaagtcttatatggatggtcaaacagcttctctgagtgggacttgtttg
caacctcagcagcagcagggaagctatcaatttacaaggggaggcggaggaccggaagac
cctaacctgccattccctatgcattcatcatccagggttcactccctgaccgcggcttac
caggctgctcagtaccctgcataccctggagagccagaaatacccagtctcagtcagcag
tctttgaccacagactcagtgtctatgccctccacccccactgcctccctctctactaca
gtgcctgagctctcagggacattatgtccatttccatcaactgcagtgatgaggacccca
gttagcctggcagaagaatgtcctttccgggccttacgttgctctggagaaacccaagga
aactgcaagtcatctgagatgtttggcgagtctatgatctgctaccctagcctggccagc
caactgccctctgagcagccccagagctgcggggccatcaacactaatggatatcaagcc
ttgggtgacaacctcctcccaccacaggctcaggatggagacttggagggccttgagcct
cctgacctgctgcctgacctactgccccagctggaggcagctctcagccaacagcatgaa
tccaaccattcctgggtcgattccagtcatgagacgggccgggagcacaagaaaccactt
gttgagtacaaggaagaaaagcctcgaaagaatgctaatggtcccagcagccaggtacgg
gtcctcagtcccccaatgaagagcagctcgtcgtcctcctcctcttcctcatcgtcttcg
tcctcatccagctcctcgtcggagaagaggacgtcacggaggacgcacactcagatggag
ttgggtacgctggacaagcaggagaaggccaataggataatatcggaggctatcgctaag
gcccggcagcgcggggagaagaacattcccagagttatgagccctgagagcttccccagc
tcgtcctcgcagcacaagcaccgcaagcgcgagcacaaaggaaacggcaaagcgcgggct
aaagagaaggcctgtaggaaggcccgcatcgtaccctcgtccaagaacaaacagaaggcc
aagatcgggaaaattgtcatcaagatcgggaagaagaaaaaacgaaagcaggagtcttca
gaggagtcagacgatgaccctccctctcgttacacttctaaagatgacgactctaaaagg
cgatcaaatcggcaggtgaagagaaagaagtacgctgaagagctggaggcccgactgtca
gatgacgaggtcaagatgatggccaaagccaagaaaacgagctctggaggctccaagcag
ccggctgttcagctcttcgtggagaaccccagtgaagaggacgctgcggttgttgacaaa
atcatgtcttctcgtatcgtcaagaaggaggtttctccaggagtggtggttgaagacgag
gagttttttgtaaaatacaaaaactactcctacctacactgtgagtgggccacagagcag
cagctggagaaggacaagaggattccgcagaagatcaaacgtttcaagctgaaacaagca
cagagggccctcttctttgcagacatggaagaggacccctttaaccctgactatgtagag
gtagacagagtgctggaggtgtcgtattgtgaggacaaagacacaggagaggaggtggtg
tactacctggtgaagtggagctcgctggcctatgaagacagcacctgggagctcaaggac
gacgtggatcagagcaagattgaagagtttgagcagctgcaggcagtgaagccagactca
cgcaggatggagcgtcccccggccaatctgtggaagaagagggatcagtcgagggaatac
aggaatggcaacagcctcagggactaccagctagagggggtcaactggctcctcttcaac
tggtacaacagacgtaactgcatcctggcagacgagatgggcctgggaaagaccatccag
tccatcacattcctggaggagatctaccgtgtgggcatcaaagggccattcctcatcatc
gccccgctctccaccatcgccaactgggagcgcgagttccgcacttggacctatctcaac
gtcatcgtgtaccacggcagcatggtcagcaggcagatgctgcagcagtatgaaatgtat
ttcagggatgcacagggccgtgtgatgcgaggggcctacaagttccaggcggtgatcacc
acgttcgagatgatcctggggggctgtcccatactcaacgccatagagtggcgctgtgtc
atcatcgacgaagcccaccgcctcaagaacaagaactgcaagctgctagagggcttcaag
ctcatgaacctggaacataaggtcctgctgacgggaactcctctccagaacactgtggaa
gaactcttcagcctgctccacttcctggagccggcacgcttcccctcagaagtcactttc
atgcaggagtttggagatctcaagactgaagagcaggtccagaagctgcaggccatcctg
aagcccatgatgctacgccggctgaaggaggacgtggagaagaagcttgctcctaaagag
gaaaccatcatcgaggtggagctcaccaacattcagaagaaatactaccgcgctatcctc
gagaagaacttctccttcctggctaaaggagccggccaggctaacatgcccaacctagtg
aacaccatgatggagctgagaaagtgctgcaaccacccctacctcatcaaaggggcagaa
gagaagatcctggaggacttccgggaggttcacaaccccaatgccttggacttccacctg
caggcgatggtacagtctgccgggaagctggtcctcatcgacaaactgctgcccaagatg
aaggccgggggccacagggtgctcatcttctctcagatggtgcgctgcctggacatcttg
gaagactacctcattcagagaaggtacttgtacgagcgtatagacgggcgtgttcgtgga
aacatgcgtcaggcagctatcgaccgcttcagtaagcccgactcggagcgcttcgttttc
cttctgtgcacacgcgccggtggcctgggaatcaacctcacggcagcagacacctgcatc
atctttgactcagactggaacccgcaaaacgacctgcaggcccaggctcgctgccaccgg
atcggtcagaacaaggcggtgaaggtgtaccgtctgatcaccaggaactcgtacgagcgg
gagatgtttgatcgcgccagcctcaagctgggtctggacaaagcggtgctgcagagcatg
agcggtcgcgataacagcctgggaggaggcaccgggggaggggcccctcagcagcagcag
cagctgtctaagaaggagatcgaggatctgctgcgacggggtgcttacggagccatcatg
gacgaggaggatgaaggggccaaattctgtgaggaggacatcgatcagatcctccagcgc
cgcacaaagaccatcaccatcgagtctgagggccgaggatccacctttgctaaggctagt
tttgtggcgtctggaaaccgcacagacatctctctggatgaccccaacttctgggacaaa
tgggccaaaaaggctgacgtagatatggaaatggccaacggcagaaacagcctggtgatc
gacacccctcgcgtcagaaagcagacgaggccgttcagcgccaccaaggatgagctggcc
gagctctcggagggcaacagcgacagcgacgactccaaacccaaactcaggcgaaaccac
gaccgcctcaacagctacgggcgcacagagtgcttcagagtggagaagaacctgctggtt
tacgggtggggcaggtggaaggatatcctcaaccacggtcgctttaagaagcagctgaca
gagagggatgtggagtccatttgcagggccctgctgtcttactgcctggtccattaccgt
ggagatgacaaaatcaaaagcttcatgtgggacctgattgcccccagcgaggacgggcgc
actaaggagctgcagaatcacctgggtctgtctgctccagtcccgcggggcaggaagggg
aagaagatgaagatccagtccagctcttttgacatccacaaagccgagtggctcaggaaa
cacaacccagagcacatgctgcaggacgacggctacaagaagcacctcaagcaccactgc
aacaaggtgctgctcagggtcagaatgctctactacctgaaacaggaggtgatcggaagc
caggcccagagggttttagacggcgaggactccagtgagataaagatctgggtgcctgac
cctgaccactcagagctgccggccttgtggtgggacgccattgctgacaagtgtctgctg
ctgggtgtctataagcatggttatgagaagtacaacactctgcgtgcggaccccactctg
tgctacctagagcgtgtgggacgaccggatgagaaggccatcgctgccgaacagagaggc
aacgacttcatggacggggatgtggatgacccagagtacaagcctgcccctgccctgctg
aaggacgacatggaggatgacgcctcttctcctggagatctcgttgtcactgacagtgcc
ggagatgcagttccagtgacagggagtcagacttcctattggccctcgccctcagtgctg
actgccaggctgaggcgactcatcacagcctctcagcgcttcaccaagagccggcagatc
ctccagatccaccagacgcagattccgtctccgtccaccatgatgctgtccgctcccctc
tgcccgctgccccccacactcaacgacaccctcaaccccaagatggtcgctaagatcgaa
cggcaacaaagatggacgaggcgagaagaggccgacttctaccgtgtggtctcaactttc
ggagtcgttttcgacccgagcctcggccgcttcgactggaccaagttcagagccatggct
cggctgcacaagaagactgacgagagcctgcagaaatacctgtgtgcttttaccgccatg
tgccggagggtgtgtcgcctgccacccaaagagggagacgctgcggtggagccatctctg
aacatccagcccatcacagaggagcgagcgtcccgcaccctctaccgggtggagctgctg
cgccaggtgagggaacaagtccttcgccacgagctgctttacgagcgcctgctgctgtgc
cagatgagctccgacctgcccgtctggtgggaggctggaacccacgaccgggacctgctc
atcggagccgccaagcacggagtcagccgcacagattaccacatcctgagggaccccgag
ctcagcttcatggccgcacagcgcaactacagccagacaaagactgctcagcagcactcg
cgcacgcccaccccgctgctacaccctcagtgccaggccagcagctccacgttgacgggc
tccccgctgcctcctccgacccacagagatgcagaggtcggtggggtcgtacccaaagtg
gagccagcctcggagggggaggaggcccaggaaaagcagggggagggttggagcccgact
cgagcaccggctactcccaccggtctggaggagaagccgctgtgtgagctggaggcggcg
cgcaccaaacccctcacccccaactcttccgagaggaaacccaagaagtccaagaagagc
cgcagggaggccaagcgtggctcggagtccgactcagacggctcctcctccagctcttcg
tcgcactcctcttccacctcctcatcgtcctcttcttccacgtcacattccgggtccagc
tcttcgtcctcttcgtcgtcctgctcctctggctcctcgtcttcatcgtcctcctcctcg
tcgtcttctgatgacagcgacagtgagggagaggaagggaagaagaaagtgcctgcagca
gccatcgtgaagggctttgacgaggacagcgtggcgtcactgagcacgatgcaggacgaa
acccaggacactcacacagctgagaacggcatcgccaacaactcctcacatcccttccag
ggaggagggtacatgctcgctgcatcctactggccaaaggatcgtgtcatcatcaaccgc
ctggacagcatctgccaggcggtgctgaagggcaaatggccgggaacgcgccgggtgtac
gagcccggaggcgccgtggcctccttctacaccaccaagctgctggacaatgccaacagc
ctgtgcgaggacccctccgcttcaccacaggggtcaaaggtgaccaagcatgttgcagaa
aacaaggagttctcagtaaaactcaacgatcaggaaggaggtctgaagttgaccttccag
aaacaaggtctacctctgaagaggcccctggagtcggaggagggcccccaggcccagcag
cagtacctggcgcggcttcaagagctgcagagcgcctcggacaccggactggccgacatc
accaagcctcagtgcagcttccagagcactcctccatgtctgcctggtcagatgaggctg
aacggagcactggacggccagccggtggtgaagaggcggagggggaggaggaagaacgtg
gagggcatggacctgctcctcatgaacaggagcagagtccctgctgttccagatcagttg
cctccaggatgggggggtattggtcaggtgggcatggctgtggctccactgccgggcttc
agccagagctccagccaggcccccgcagacactgacaccagggtgcccgtcatcaaccta
aaagatggcacccggctggcaggggaagacgccccccggaggaaagatctggaacagtgg
ctgatggagcaccctggctttgtggccgacacaggagccttcatcccgggggtaaataag
atgccaatgcagttccacttccaggacggtcggcccaaacagaagaggcaccgctgcagg
aacccaaacaagatcgatgtgaacagtctgaccggagagngaagggtccagatcatcaac
aggaggaatgcacgcaaggtgggtggagcctttgctcctcctctgaaggatctctgccgg
ttccttcaggagaaccccgagtacggagtcccacctgaatgggccgatgtcgtcaaacag
tcgggttacctcccagagagcatgtttgacaggatcctgacgggacccatcgttcctgag
gaggtgagccggcgtggacgtcgacccaagaaccctctggccaaggcggcagcggcggcg
gcttcagcccccaacccagcagcctccgccctgggtctgaaccccttgctggccaacggc
ctgctctccgggatggacctgagcagcctgcaggccttccagcagaacctgcagagcctg
cagtctctgcagctcaccgccggcctcatggggctgccgtccgacgccagcaacctggcc
gccagtaacctagcagccatgtttcccatgatgctctctggtatggccggattgccgaac
ctgattggcatgagcagcctgctggggaagcccgctcaggagggcgcgggaggcttcgag
gagaagacaaagggaagcagcagcggtgcagcaggagagccgtctgcctctaaagccccc
ccccacacctcagagcccaaaggagaaaggacagagggctcaaactcgactccttcttcc
acttccagctcctcttcctccgccccacaaagtgcttcagctgcctcttcactgtctctc
aaccccttgttactctccagtatgctttacccagggatgcttctcactccaggccttaac
ccccccacacagccgcagagctccaactctgaccccccccaccctcctgctcctcttcct
cctgcaggctcttcacaggagatcgctcagctagcggcagagagggacgcagaggacgat
gacgaggcattagaagacgatgatgaagaagaagatgactcagcagaacagaaggagaac
agtggtcctgacggttcggggaaagctgagtcatcttcctccgagtctgggagctcctct
tcatcggatgattcagactccagtgattag
DBGET
integrated database retrieval system
