Eleginops maclovinus (Patagonian blennie): 134863385
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Entry
134863385 CDS
T09869
Symbol
ddb1
Name
(RefSeq) DNA damage-binding protein 1 isoform X1
KO
K10610
DNA damage-binding protein 1
Organism
emac
Eleginops maclovinus (Patagonian blennie)
Pathway
emac03420
Nucleotide excision repair
emac04120
Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:
emac00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
134863385 (ddb1)
09124 Replication and repair
03420 Nucleotide excision repair
134863385 (ddb1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
emac04121
]
134863385 (ddb1)
03400 DNA repair and recombination proteins [BR:
emac03400
]
134863385 (ddb1)
Ubiquitin system [BR:
emac04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
Cul4 complex
Adoptor protein
134863385 (ddb1)
DNA repair and recombination proteins [BR:
emac03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
Cul4-DDB2 complex
134863385 (ddb1)
TCR (transcription coupled repair) factors
Cul4-CSA complex
134863385 (ddb1)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
CPSF_A
Beta-prop_RSE1_1st
Beta-prop_RSE1_2nd
Beta-prop_RIG_2nd
Beta-prop_IFT122_1st
Motif
Other DBs
NCBI-GeneID:
134863385
NCBI-ProteinID:
XP_063737945
LinkDB
All DBs
Position
4:complement(25172985..25229793)
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AA seq
1140 aa
AA seq
DB search
MSYNYVVTAQKPTAVNACVTGHFTSADDLNLLIAKNTRLEIYVVTAEGLRPVKEVGMYGK
IAVMELFRPKGESKDLLFILTSKYNACILEYKQNGDSIDIITRAHGNVQDRIGRPSETGI
IGIVDPECRMIGLRLYDGLFKVIPLDRDNRELKAFNIRLEELQVIDVHFLYGCQAPTVCF
IYQDPQGRHVKTYEVSLREKEFNKGPWKQENVEAEASMVIPVPEPFGGAIIIGQESITYH
NGDKYLAIAPPTIKQSTIVCHNRVDPNGSRYLLGDMEGRLFMLLLEKEELMDGTVALKDL
HVELLGETSIAECLTYLDNGVVFVGSRLGDSQLVKLNVDSNEQGSYVGVMETFTNLGPIV
DMCVVDLERQGQGQLVTCSGAFKEGSLRIIRNGIGIHEHASIDLPGIKGLWPLRSEAGKE
TDDMLVLSFVGQTRVLMLSGEEVEETELPGFVDNQQTFYCGNVAHQQLIQITSGSVRLVL
QESKALVSEWKEPQGRNISVAACNHTQVVLAVGRALYYLQILAGELKQISTTEMEHEVAC
LDITPLGEGGGESPLCAVGLWTDISARVLKLPCFTALHKEMLGGEIIPRSILMTTFEGSY
YLLCALGDGALFYFGLDLQTGALSERKKVTLGTQPTVLRTFRSLSTSNVFACSDRPTVIY
SSNHKLVFSNVNLKEVNYMCPLNSEGYPDSLALANNSTLTIGTIDEIQKLHIRTVPLYES
PRRICYQEVSQCFGVLSSRVEIQDVSGTTSAVRPSASTQALSSSVSSSKLFPSSTSPHET
SFGEEVEVHSLLVVDQHTFEVLHAHQFLPSEYALSMVSCRLGKDPSVYFIVGTAMVYPEE
AEPKQGRIIVFHYTDGKLQTVAEKEVKGAVYSMVEFNGKLLASINSTVRLYEWTAEKELR
TECNHYNNIMALYLKTKGDFILVGDLMRSVLLLAYKPMEGNFEEIARDFNPNWMSAVEIL
DDDNFLGAENAFNLFVCQKDSAATTDEERQHLQEVGVFHLGEFVNVFCHGSLVLQNLGES
STPTQGSVLFGTINGMIGLVTSLSEGWYSLLLDLQNRLNKVIKSVGKIEHSFWRSFHTER
KTEQATGFIDGDLIESFLDLGRAKMQEVVSTLQIDDGSGMKREATVDEVIKIVEELTRIH
NT seq
3423 nt
NT seq
+upstream
nt +downstream
nt
atgtcgtacaactacgtggtaacagcccagaaacctactgcagtgaacgcctgcgtcaca
ggtcacttcacctctgcggatgacctcaacctgctcattgctaaaaacacacggttggag
atctatgttgtcacagcagaggggctgcggcccgtcaaggaggtgggcatgtatgggaag
attgctgtcatggagctcttcaggccaaagggtgagagcaaagacctgctgttcattctc
acatccaagtacaacgcctgcatcctcgaatacaaacagaatggggacagcattgacatc
atcactcgcgcccatggaaatgtccaggatcgtattgggcgtccgtcagaaaccggtatt
attggaattgtagacccagagtgccgtatgatcggcctgcggctgtatgacgggttgttt
aaggtgatcccattggaccgggacaatcgtgagctcaaggccttcaacatcagactggag
gagctccaggtcatcgatgttcacttcctgtacggctgccaggcccccacagtctgcttc
atctaccaggacccccaagggcgccatgtgaagacctatgaggtttctctgagggagaag
gagttcaacaagggcccctggaaacaggagaatgtggaggcagaggcatcaatggtcatc
ccagtgccagagccatttggtggagctataatcataggacaagagtccatcacttaccac
aatggagacaaatacttggccattgcaccaccgactatcaagcaaagcaccatcgtctgt
cacaaccgggtggaccccaatggctcccgctatctgctgggggacatggagggacggctc
tttatgctgctgctggagaaggaggagctgatggacggcacagtggcgctcaaagacctg
catgtggagctgcttggagagacatccatcgctgagtgtttgacctacttggataacggt
gtggtctttgtgggctcaagactaggcgactcccagttggtcaagctcaacgtggacagc
aatgaacagggctcatatgtgggggtgatggagacgttcaccaatctggggcccattgtg
gacatgtgtgtggtggatctggagaggcagggccaaggccagctggtgacctgctctggt
gcgtttaaggaaggctctctgagaatcattcgcaacggcattgggattcatgagcatgcc
agcattgacctgccaggaatcaaaggtttgtggccgctccgctcggaggcaggcaaagag
acagatgacatgctggtgctgtctttcgtgggtcaaacgcgagtgttgatgctgagtggt
gaggaagtcgaggagacagagcttcccggctttgtggacaaccagcagacattttactgc
ggcaacgtggcgcaccaacaactcattcaaatcacgtcaggctcggtgcgcctggtgctg
caggagagcaaggcattagtgagtgaatggaaggagccacagggcaggaacatcagcgtg
gctgcctgcaaccacacccaggtggttctcgctgtggggagagccctctactacctgcag
atcctggctggggagctcaaacagatcagtaccacggagatggagcacgaggtggcctgc
ctggatatcacacctctgggggagggcggcggtgagtcgccgctctgcgctgtgggactc
tggaccgacatctcagcccgtgtcctcaaactgccctgcttcacagccctgcacaaggaa
atgctgggtggagaaatcatccctcgctcaatcctaatgaccaccttcgaaggcagctac
tacctgctgtgtgcgctgggagacggggcgctcttctactttggactggacctgcagact
ggcgccctgagcgagcgcaagaaggtcactctgggcacccagcccactgtgctgaggacc
ttcagatccctgtccacttccaacgtgttcgcctgctccgacagacccactgtcatctac
tcctccaaccacaagctggtgttctccaacgtcaacctcaaggaggtcaactacatgtgc
ccgctcaactccgagggctatcccgacagtctagctctggctaacaacagcactctgacc
atcggcaccatcgacgagattcaaaaactccacattcgcaccgttcccctctacgagtcc
cccagacggatctgttaccaggaggtctcgcagtgttttggtgttttatccagcagggtg
gagattcaggatgtgagcggcaccacatctgccgtgcgccccagcgccagcacccaggct
ctctccagcagcgtgagttcaagcaagctattccccagcagcacttctccccacgagacc
tcctttggtgaagaggtagaggttcacagtctgctggtggtggatcagcacacttttgaa
gtcctccatgcccatcagttcctccccagcgagtatgccctcagcatggtgtcatgtcgt
ctgggaaaagacccttcagtgtattttatcgtcggcaccgccatggtgtacccagaggag
gctgagcccaagcagggtcgcatcattgtcttccactacactgacggtaagctgcaaact
gtggctgagaaggaggtgaaaggagccgtctattctatggtggagttcaatggcaaactg
ttggccagcatcaatagcacagtccgtctgtacgagtggacggctgagaaggagctgagg
actgagtgtaaccactacaacaacatcatggctctttacctgaagaccaaaggggacttc
atcctggtgggagacctgatgaggtccgtcctgctgctggcttacaaacccatggagggc
aactttgaagagattgcccgtgactttaatcctaattggatgagtgctgtggaaatcctg
gatgatgacaacttcctgggggcagagaacgctttcaatctgtttgtctgccagaaagac
agtgcggccaccacagacgaggagcggcagcacctgcaggaggtgggggtcttccacctc
ggggagtttgtaaatgtcttctgccacggctcgctggtgctgcagaacctgggcgagagc
tctacaccaacccagggctccgtgctcttcggcaccattaacggcatgattggtctggtg
acgtccctgtccgagggctggtacagtctcctcctggacctgcagaaccgcctcaacaaa
gtcatcaagagcgtggggaagatcgagcacagcttctggaggtccttccacacagagcgc
aagacagagcaggctacaggattcatcgacggagatctgatcgagagcttcttggatctc
ggtcgagccaagatgcaggaggtcgtcagcactctgcagatcgatgatggcagcggcatg
aagcgtgaggccacagtggacgaggtcattaagattgtggaggagctgacgaggatccac
taa
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