Eleginops maclovinus (Patagonian blennie): 134863405
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Entry
134863405 CDS
T09869
Symbol
polr2b
Name
(RefSeq) DNA-directed RNA polymerase II subunit RPB2
KO
K03010
DNA-directed RNA polymerase II subunit RPB2 [EC:
2.7.7.6
]
Organism
emac
Eleginops maclovinus (Patagonian blennie)
Pathway
emac03020
RNA polymerase
emac03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
emac00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
134863405 (polr2b)
09124 Replication and repair
03420 Nucleotide excision repair
134863405 (polr2b)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
emac03021
]
134863405 (polr2b)
03400 DNA repair and recombination proteins [BR:
emac03400
]
134863405 (polr2b)
Enzymes [BR:
emac01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
134863405 (polr2b)
Transcription machinery [BR:
emac03021
]
Eukaryotic type
RNA polymerase II system
RNA polymerase II
Core subunits
134863405 (polr2b)
DNA repair and recombination proteins [BR:
emac03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase II complex
134863405 (polr2b)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_Rpb2_6
RNA_pol_Rpb2_1
RNA_pol_Rpb2_2
RNA_pol_Rpb2_7
RNA_pol_Rpb2_4
RNA_pol_Rpb2_3
RNA_pol_Rpb2_5
DUF5817
Motif
Other DBs
NCBI-GeneID:
134863405
NCBI-ProteinID:
XP_063737973
LinkDB
All DBs
Position
4:complement(4034647..4058306)
Genome browser
AA seq
1174 aa
AA seq
DB search
MYEQDEDPQYEEDDDEITPDLWQEACWIVISSYFDEKGLVRQQLDSFDEFIQMSVQRIVE
DAPPIDLQAEAQHTSGEVEEPPRYLLKFEQIYLSKPTHWERDGAPSPMMPNEARLRNLTY
SAPLYVDITKTIIKEGEDQLQTQHQKTFIGKIPIMLRSTYCLLSGLTDRDLCELNECPLD
PGGYFIINGSEKVLIAQEKMATNTVYVFAKKDSKYAYTGECRSCLENSSRPTSTIWVSMM
ARGGQGVKKSAIGQRIVSTLPYIRQEVPIIIVFRALGFVSDRDILEHIIYDFDDPEMMEM
VKPSLDEAFVIQEQNVALNFIGSRGAKPGVTKERRIKYAKEVLQKEMLPHVGVSDFCETK
KAYFLGYMVHRLLLAALGRRELDDRDHYGNKRLDLAGPLLAFLFRGMFKNLLKEIRLYAQ
KFIDRGKDFNLELAIKTRIISDGLKYSLATGNWGDVKKAHQARAGVSQVLNRLTFASTLS
HLRRVNSPIGRDGKLAKPRQLHNTLWGMVCPAETPEGHAVGLVKNLALMAYISVGSQPSP
ILEFLEEWSMENLEEISPAAIADATKIFVNGCWVGIHKDPEQLMNTLRKLRRQMDIIVSE
VSMIRDIREREIRIYTDAGRICRPLLIVEKQKLLLKRRHIDQLKEREYNNYSWQDLVASG
VVEYIDTLEEETVMLAMTPDDLQEKGVAYCSTYTHCEIHPSMILGVCASIIPFPDHNQSP
RNTYQSAMGKQAMGVYITNFHVRMDTLAHVLYYPQKPLVTTRSMEYLRFRELPAGINSIV
AIASYTGYNQEDSVIMNRSAVDRGFFRSVFYRSYKEQESKKGFDQEEIFEKPTRETCQGM
RHAIYDKLDDDGLIAPGVRVSGEDVIIGKTVTLPENDDELDSTNRRYTKRDCSTFLRTSE
TGIVDQVMVTLNQEGYKFCKIRVRSVRIPQIGDKFASRHGQKGTCGIQYRQEDMPFTCEG
ITPDIIINPHAIPSRMTVGHLIECLQGKVSANKGEIGDATPFNDAVNVQKVSNLLSEYGY
HLRGNEVLYNGFTGRKLTSQIFIGPTYYQRLKHMVDDKIHSRARGPVQILNRQPMEGRSR
DGGLRFGEMERDCQIAHGAAQFLKERLFEASDPYQVHVCNLCGLMAIANTRTHTYECRGC
RNKTQISLVRMPYACKLLFQELMSMSIAPRMMTS
NT seq
3525 nt
NT seq
+upstream
nt +downstream
nt
atgtacgagcaagacgaagacccgcagtatgaagaggacgatgatgaaatcactccagat
ttgtggcaggaggcgtgttggatcgtcatcagctcttattttgacgagaagggtctggtg
cgacagcagctggattcgttcgatgaatttatccagatgtctgtgcagaggattgtggag
gatgccccccccatcgacctgcaggctgaagcccagcacacctctggagaggtggaggag
ccgcctcgctacctgctgaagttcgagcagatctacctgtccaagcccactcactgggag
agagacggagctccgtcacccatgatgcccaacgaagcccggctcagaaacctcacgtac
tcggcaccactgtacgtggacatcacaaagaccatcatcaaggagggtgaggaccagctg
cagactcagcaccagaagaccttcattggtaaaattcccatcatgcttcgctccacctac
tgtctgttgagtggcctgacggacagagacctttgtgaactcaacgagtgtccgctggac
cccgggggctatttcatcattaacggctccgagaaggtgctaatcgctcaggagaagatg
gccacaaacacggtgtatgtgtttgctaagaaggactcaaagtacgcttacacaggcgag
tgccggtcctgtctggagaactcttcccgtcccaccagcaccatatgggtcagcatgatg
gcccgcggaggacagggagtgaagaagagcgccatcggtcagaggattgtgtccacgctg
ccctacatcagacaggaagtgcccattatcatcgtgttccgggcgctgggcttcgtgtcc
gacagagacatcctggaacacatcatctatgatttcgacgacccggagatgatggagatg
gtgaagccgtctctggacgaggcctttgtgatccaagagcagaacgtggctctgaacttc
ataggctccagaggagcaaaacctggcgtgactaaggaacgcagaatcaaatacgccaaa
gaagtcctgcagaaggagatgctgccgcacgtcggggtcagcgacttctgtgagaccaaa
aaggcctacttcctggggtacatggtgcaccggctgctgctggcggctctaggtcggcgg
gagctggacgacagggatcactatggcaacaagaggctggacctggccgggccgctgctg
gccttcctgttcagaggcatgtttaagaacctgctgaaggagatccggctctacgctcag
aagtttatcgacagaggaaaggacttcaacctggagctggccatcaaaacccggatcatc
tccgacggcctgaagtactctctggccacggggaactggggagacgtgaagaaggcccat
caagccagagccggagtgtctcaggtgttgaaccgcttgacctttgcctccacgctgtct
cacctccgccgagtcaactcgcccatcggcagagacgggaagctggccaagccccggcag
ctgcacaacaccctctgggggatggtgtgtccggctgagacgcctgagggccacgcagtg
gggctggtgaagaacctagccctcatggcctacatctcggtgggatcccagccgtcgccc
atcctggagttcctggaggagtggagcatggagaacctggaggagatctcgccggcggcc
atcgcagatgccactaagatctttgtgaacggctgctgggtggggatccacaaagacccc
gaacagctgatgaacacactgaggaaactccgccgtcagatggacatcatcgtgtctgag
gtgtccatgatcagagatatcagagagcgagagatcaggatctacacggacgctggacgc
atctgcagaccgctgttgatcgtcgagaaacagaaactcctgctgaagaggcgacacatc
gaccagctgaaggagcgcgagtacaacaactacagttggcaggatctggtggcgagcggc
gtggtggaatacatcgacactctggaggaggagacagtgatgcttgctatgacccctgat
gacctccaggagaaaggcgtggcttactgctccacctacactcactgtgaaatccaccca
tccatgatcctaggagtctgcgcctccatcatccccttccccgatcacaaccagtctccc
aggaacacgtaccagtctgctatgggcaaacaggccatgggagtctacatcaccaacttt
catgtgcgaatggacacgctggcccatgtgttgtactaccctcagaaaccgctggtcacc
acccggtccatggagtacctgcgtttcagagagctgcctgcaggtattaactccatcgtg
gcgatcgcctcgtacacagggtacaaccaggaggactctgtgatcatgaacaggtctgct
gtggatcggggcttcttcaggtctgttttctaccggtcctacaaagagcaggagtctaag
aaaggttttgatcaggaggagatctttgagaagccgacccgtgaaacctgtcagggtatg
agacatgccatctatgacaaactggatgacgacgggctgatcgcgcccggcgtccgtgtc
tccggagaggacgtgatcatcgggaagacggtgactctgccagagaacgacgacgagctg
gacagcaccaaccggcgctacaccaagagagattgcagcaccttcctgaggaccagcgag
accggtatcgtggaccaagtgatggtgaccctgaaccaggagggctacaagttctgcaag
atccgggtgcgctcggtccggatccctcagatcggagataagtttgccagccgacacggg
cagaagggaacttgtgggatccagtacagacaggaggacatgccgtttacctgtgaggga
atcactccggacattatcatcaatcctcacgccattccctccagaatgactgtaggccat
ctgattgagtgcttgcagggcaaggtctctgcaaacaaaggggagatcggtgacgcgacg
ccctttaacgacgccgtcaacgtgcagaaagtgtccaacctgctgtcggagtatggttat
cacctgagaggaaatgaggttctgtataatggcttcacggggaggaagctgacgtcccag
atcttcattggacccacgtactaccagcggctcaaacacatggtggatgacaaaatccac
tcgagggcccggggccccgtccagatcctcaacaggcaaccaatggagggccggtcccgt
gacggcggtctgcggttcggtgagatggagcgagattgtcagattgctcacggcgctgct
cagttcctcaaagagcgtctgttcgaggcgtctgatccatatcaggtccacgtctgtaac
ctgtgtggactaatggccatcgccaacacgcgcacacacacctacgagtgcagaggctgc
cgcaacaagacccagatctcgctggtgcgcatgccgtacgcctgtaagctgctcttccag
gagttgatgtcgatgagcattgctcctcgtatgatgacgtcatag
DBGET
integrated database retrieval system
