Eleginops maclovinus (Patagonian blennie): 134863450
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Entry
134863450 CDS
T09869
Symbol
lingo1b
Name
(RefSeq) leucine-rich repeat and immunoglobulin-like domain-containing nogo receptor-interacting protein 1-B
KO
K23533
leucine-rich repeat and immunoglobulin-like domain-containing nogo receptor-interacting protein
Organism
emac
Eleginops maclovinus (Patagonian blennie)
Brite
KEGG Orthology (KO) [BR:
emac00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
emac04131
]
134863450 (lingo1b)
Membrane trafficking [BR:
emac04131
]
Endocytosis
Lipid raft mediated endocytosis
RhoA-dependent endocytosis
134863450 (lingo1b)
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
LRR_8
LRR_5
LRR_4
I-set
Ig_3
ig
Ig_2
LRR_Zer-1
LRR_9
Ig_C17orf99
LRRNT
V-set
LRR_6
Motif
Other DBs
NCBI-GeneID:
134863450
NCBI-ProteinID:
XP_063738046
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All DBs
Position
4:25798093..25814527
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AA seq
623 aa
AA seq
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MTVLVRNRMVFGEAGGHSYLVACWQPILILMLGTVLSGSTTGCPSRCDCNGQERSVACNR
RRLAALPEGIPTETKLLDLSKNRLKILGPEEFINYPQLEELQLNENIISSIEPGAFGNLM
NLRTLGLRNNQLKLIQLGVFTGLTNLTQLDISENKIVILLDYMFQELYNLRALEVGDNDL
VFISPLSFHGLSNLESLNIEGRNLPSVPTDALSHLHNILSLRLRYLNVTVMRDYSFKRLY
RLRVLEISEMPAMDTMTAKCLYGLNLTSLSITKCNLTVIPYQAISHLRHLRFLNLSFNPI
HAVEGNKLFNLQKLQAFHLAGGRLAAIEPYSFRGLNHLRVLNVSSNILNTLEESVFHSVG
NLETLALYDNPLACDCRLLWVFRRRWRLNFNRQQPMCASPDVVQGKEFKDFPDILPSDYF
ICQKSKIMDYKVQESHVDEGTTVHFACKAEGDPDPVIMWLSPKKDYITTKTAGLRLYVSS
EGTLEVRYAQIQDNGTYLCIASNAAGNDTKAAHLFVHSNSPNWPQQSNKSFAFISNQPSD
EGANVTRATIPFPFDVKTLIIATTMGFISFLGVVLFCLVILFLWSRGKDSIKSSIEVEYV
PRKEEPEEASPTEAPIQFNMKIM
NT seq
1872 nt
NT seq
+upstream
nt +downstream
nt
atgacagtcctggtacgcaataggatggtgtttggcgaggcaggagggcacagctacttg
gtggcatgctggcagcccatcctgatcctcatgctgggcaccgtcctttctggctccacc
accggttgcccctcccgatgtgactgcaacggtcaggagcgttcagtcgcgtgcaatcga
cggagactagcagctcttcctgagggcattcccacagaaactaagctgctagaccttagc
aagaaccgtctgaaaatacttgggcccgaggagttcattaattaccctcaactggaggag
ctgcaactcaacgaaaatattatttcatccattgaaccaggggcttttggcaacctcatg
aacctgcgaactctgggtttgcgtaacaaccagttaaagctcattcagctgggggtgttc
acaggcctgaccaacctcacccagctcgatataagtgaaaacaaaattgtcattctgctc
gactacatgttccaggaactatacaaccttagggctctggaggtaggcgacaatgacctg
gtattcatctcacccctatcatttcatggcctaagcaaccttgaaagcctcaacattgag
ggacgcaatctgccctcagtgcccactgatgccctgagccatctgcacaacatcttgtca
ctccgattacgctatctcaacgtcactgtcatgagggattactcctttaaaaggctctat
cgactcagagtgctggagatttctgaaatgcctgccatggataccatgacggcaaaatgc
ttgtatggactcaacctcacatccttgtccatcacaaaatgtaatcttacggtcatcccc
tatcaagccatcagtcacctaaggcatctccggtttttgaatctgtctttcaatcccatt
catgccgtggaggggaacaaactgttcaatctgcagaagctccaggcttttcatttggcc
ggtggaagattagctgccattgaaccctactcattccgaggactcaaccacctccgtgta
ctcaatgtttccagcaacatcctaaacaccctagaggagtctgtttttcactcagtggga
aacctggagactctggctttgtatgacaacccgttggcctgtgactgtcgcctgctctgg
gtctttcgccggcgttggaggctcaactttaacagacaacagcccatgtgtgcttcacct
gatgtggttcaaggaaaagagttcaaggatttcccagacattctcccttctgactatttc
atctgccagaaatcaaagataatggattataaggttcaggaaagccatgtagatgaagga
actacggttcattttgcttgcaaagctgagggtgatccggatcctgtgataatgtggtta
tcccctaagaaagactacatcactaccaaaactgcggggttaagactttatgtgtctagt
gagggcacactggaggtgcgttacgcccaaatccaagacaacggcacctacttgtgcatt
gcaagcaatgcagcaggcaatgacaccaaagctgctcacctttttgtgcatagcaactcc
cctaactggccccaacagtcaaataagtcatttgccttcatttccaaccagcccagcgat
gaaggagctaatgtgactcgggccaccattccattcccgtttgacgttaagacacttatc
attgcaaccaccatgggatttatctctttccttggagttgttcttttctgtcttgtaata
ttattcctctggagtcgagggaaagacagtatcaagtcgagtatagaggttgaatatgtg
ccacgtaaagaggaaccagaggaggccagtccaactgaagcgcccatacaattcaacatg
aaaatcatgtga
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