Eleginops maclovinus (Patagonian blennie): 134863615
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Entry
134863615 CDS
T09869
Symbol
katnb1
Name
(RefSeq) katanin p80 WD40 repeat-containing subunit B1 isoform X1
KO
K18643
katanin p80 WD40 repeat-containing subunit B1
Organism
emac
Eleginops maclovinus (Patagonian blennie)
Brite
KEGG Orthology (KO) [BR:
emac00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
emac04812
]
134863615 (katnb1)
Cytoskeleton proteins [BR:
emac04812
]
Eukaryotic cytoskeleton proteins
Microtubules
Tubulin-binding proteins
Microtubule severing proteins
134863615 (katnb1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Beta-prop_WDR3_1st
Beta-prop_WDR5
Beta-prop_THOC3
WD40
Katanin_con80
WD40_Prp19
WD40_CDC20-Fz
Beta-prop_WDR3_2nd
WD40_WDHD1_1st
Beta-prop_EML_2
Beta-prop_TEP1_2nd
Beta-prop_WDR36-Utp21_2nd
WDR55
EIF3I
WD40_Gbeta
Beta-prop_WDR90_POC16_2nd
Beta-prop_CAF1B_HIR1
Beta-prop_WDR36-Utp21_1st
ANAPC4_WD40
WD40_MABP1-WDR62_2nd
Beta-prop_EML
WD40_MABP1-WDR62_1st
Beta-prop_TEP1_C
NBCH_WD40
Beta-prop_Aladin
Beta-prop_WDR75_1st
Beta-prop_DCAF4
Beta-prop_WDR41
Beta-prop_IFT140_1st
WDR90_beta-prop_4th
Beta-prop_EIPR1
Beta-prop_IFT122_1st
Beta-prop_SPT8
Beta-prop_SCAP
Beta-prop_Vps41
WD40_RFWD3
Beta-prop_VPS8
Beta-prop_WDR19_1st
Beta-prop_HPS5
Beta-prop_RIG_2nd
PROPPIN
Beta-prop_WDR35_TULP_N
Beta-prop_DCAF12
RMC1_N
Beta-prop_LRRK2
Beta-prop_RIG_1st
Beta-prop_IP5PC_F
Beta-prop_IFT140_2nd
Tricorn_2nd
WDR54
VPS8_N
Ge1_WD40
Beta-prop_NUP159_NUP214
Beta-prop_IFT122_2nd
Beta-prop_ACSF4
CFAP43_N
Cytochrom_D1
CCHC_ZFPM2
Motif
Other DBs
NCBI-GeneID:
134863615
NCBI-ProteinID:
XP_063738302
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Position
4:4954556..4962630
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AA seq
696 aa
AA seq
DB search
MAASSSTKISWRLQEFEAHSSSVSCLSLGKSSGRLLATGGEDCRVNIWAVSKANCIMSLT
GHKTPVECVQFNMSEEQVVAGSQSGSIRVWDLEAAKILRTLMGHKSNITSLGFHPFGDFL
ASSSTDTNIKLWDVRRKGYVFRYKGHTQAVRSLAFSPDGKWLASASDDCTVKLWDLTQGK
TITEFKSHTGPVNIVQFHPNEYLLASGSSDRTVKLWDLEKFRMIGSLEGDTSAVRCVSFS
TDGSCLYSGATDTLRVFGWEPDRCFDVVPVGWGKLSDLAVCNQQLIGVSHQLSSVSSFVV
DLKRVKKSAGAALQGVIQDNQPIPEHKDPKSAALRRNYERPSTTCSPSQRVKQHSEAERR
SPEGERRSQSDEEADEKLSSAEIHNAEDFKEIFQPKNAISRTPPKISEPFPAPPEDDTVL
AVGRQLKDLVSPFPEKMPAAPLASSTPVQRVEPTVVSCVKRSAPPSVPATSSSSVPPLPP
SQPPLKSKPPPKIIPSNRNEPIGLNVADFLPSSPNRGGALSDDEALSQLKKGHDTMCVML
RSRHRNLETVRGVWARQDIKSALDAAASMNDLSIVVDILNIINLQPSLWKLDLCTTVLPQ
IEQLLQSKYESYIQTGCSSLKLIMKHFWKLISETLRATPSVGVDITREERHQKCRLCCRQ
LQNLSNMVKTRAGGVGRHGSTFRELTLLMAPLDDDI
NT seq
2091 nt
NT seq
+upstream
nt +downstream
nt
atggctgcatccagcagcaccaagatctcatggagactgcaggagttcgaggcgcactcc
agcagcgtgtcctgcctgtctctagggaagagttcaggccgcctgctggcaacaggaggg
gaggactgcagggtgaacatctgggctgtgagcaaggccaactgcatcatgagtttgacg
ggccataagaccccggtggagtgtgtgcagttcaacatgtctgaggagcaggtggtagcc
ggatcccagtctggatccatacgagtctgggacctggaggctgccaagattttaaggact
ctgatgggacataagtccaacatcaccagtctgggtttccatcccttcggagacttcctc
gcctccagctccaccgacacaaacatcaagctgtgggatgttcggaggaaaggatatgtg
ttcagatacaagggtcacactcaggcggtgaggagtctggccttcagtcccgacgggaag
tggttagcttcagccagcgacgactgcaccgtcaagctgtgggacctgacgcaggggaag
accatcaccgagttcaagtctcacaccggccctgtcaacatcgtgcagtttcaccccaac
gagtacctgctggcctcaggcagctccgacaggacggtgaagctgtgggatctggagaag
ttcaggatgatcggctcgttggagggagacacatctgcagtgcggtgtgtgtccttcagc
actgacggcagctgtctgtacagcggggccacagacactctgagggtcttcggctgggag
cccgaccgctgcttcgacgtggtgccggtgggctgggggaagctgtcagacctggccgtc
tgcaaccagcagctgatcggcgtctcccaccagctgtccagcgtgtcgtcctttgtcgtg
gatctgaagcgagtgaagaagagcgccggcgctgctctgcagggagtcatccaggacaac
cagccgatcccggagcacaaagatcccaaatctgccgccctgcgcaggaactacgagcgc
ccctccaccacctgcagcccctcccagagggtgaagcagcactctgaggctgagaggcgg
agccccgagggcgagaggcggagtcagagcgatgaggaggcggacgagaagctgtcgtca
gcggaaatccacaacgctgaagacttcaaggagatcttccagcccaagaacgccatctct
cgaactcctccaaagatatcagagccattccctgctcctccagaggacgatacagtgtta
gcggtcggccgtcagctgaaggacctcgtgtctccttttccagagaagatgccggctgct
cctctggcctcctccaccccggtgcagagggtggagcctacggtggtttcatgtgtgaag
cgttcggctcctccctccgtccccgccacctcctcctcttctgtacccccccttcctccc
tctcagccccccctcaagtccaaaccgccccctaaaatcatcccgagcaacaggaacgag
ccgatcggactcaacgtggccgacttcctgccttcctctcctaaccgggggggtgctctg
agtgatgatgaggctctctctcagctgaagaagggtcacgacaccatgtgtgttatgctg
cgcagccgacaccgcaacctggagacggtgaggggggtgtgggcccggcaggatatcaag
agcgcactggacgctgccgcctccatgaacgatctgtccatcgtcgtggacatcctgaac
atcatcaacctgcagccgtctctgtggaagctggacctctgcaccacggttctccctcag
atcgagcagctgctgcagagtaaatacgagagctacattcagacaggctgctcctccctg
aagttgatcatgaagcatttctggaagctgatttctgagacgctgagagccacgccgtct
gtgggggtggacatcacacgagaggagcgacaccagaagtgcaggctctgctgccggcag
ctgcagaacctcagcaacatggtgaagacccgggcggggggggtgggtcgccacggcagc
accttcagggagctgacgctgctgatggcgccgctggacgacgacatctga
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