Eleginops maclovinus (Patagonian blennie): 134864412
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Entry
134864412 CDS
T09869
Symbol
rnf38
Name
(RefSeq) E3 ubiquitin-protein ligase RNF38
KO
K19041
E3 ubiquitin-protein ligase RNF38/44 [EC:
2.3.2.27
]
Organism
emac
Eleginops maclovinus (Patagonian blennie)
Brite
KEGG Orthology (KO) [BR:
emac00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
emac04121
]
134864412 (rnf38)
Enzymes [BR:
emac01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
134864412 (rnf38)
Ubiquitin system [BR:
emac04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
134864412 (rnf38)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
zf-RING_2
zf-RING_11
zf-rbx1
zf-C3HC4_2
zf-C3HC4
zf-RING_5
zf-C3HC4_3
zf-ANAPC11
zf-RING_UBOX
VPS18_RING_C
zf-RING_16
Motif
Other DBs
NCBI-GeneID:
134864412
NCBI-ProteinID:
XP_063739420
LinkDB
All DBs
Position
5:21473687..21496831
Genome browser
AA seq
753 aa
AA seq
DB search
MPIAAAGQPTTLEHRVCPRLPSTPEPVPKGADLFDEAGAAESAERTEYGGAEGGRGLGGY
SYSGARGFVPGSTNGSPPHSPAASSSFLFHPLHPHQIAMEPPRTRSRSRSGYYQQYGGGN
GNGITGSGVMGSNHHHHHQQQQQQQQQQLHPQQHGAGCAPLGAHSNHPENQPRAPGSNAS
PGIQRLFSVPGAHRIPAEGASGGSYHCHPDHAYGEESDKSEESPSPKRQRLSSQSVLEQI
TSSAPPPSTPSPPIRPWESGPPSRRQPHPHPHYHQERCLTPARHRRSPPARRQRGRLSRP
PRHLPPHHQHHPSTQSPGPRLSPSERQDENYHHHPPTHQTYTTHTPSAYSQPPTAGGGAV
GLEEPRAFHPPTLSPRLLHPAAHHHHLHHHHQQQQQQQQQQHQHHHAAQQQQGAMVMDLH
EQLQQASVPVSYTVTPVPPHSLAAPLCSGQHLPPTCSSQQQVPACSVVFSTGQHYHPMLQ
ACSMQHLPMPYAFPSLLSGDPQFLLPHPPHLAHHPPHLPTPAQFLPFQTQQPRSPLQRIE
NEVELLGEQLSVGGGFSYAHHHHHHHHHQPPTPLPPSTPLQFLSHHDPLSQELFTVPYPH
FMPRRFTSRRYRSQQAVPPSPYHPSFLPYFLSMLPVPPNVAPTINLELDVDDGEVENYEA
LLNLAERLGEAKPRGLTKADIEQLPSYRFNSNNHQSEQTMCVVCMCDFESRQLLRVLPCN
HEFHAKCVDKWLKANRTCPICRADASEVQRDSE
NT seq
2262 nt
NT seq
+upstream
nt +downstream
nt
atgccaatcgcagccgctggacagccaacgactcttgagcatagagtttgcccccggctg
ccctccaccccggagcctgtccctaaaggggctgatttattcgacgaggcgggggcggcg
gagtcggcggagcgaacagagtacgggggcgcggaggggggcagaggactcgggggctac
agctacagcggcgctaggggctttgtacccggatccaccaacggctctccgccgcactcc
ccagccgcttcctcctcttttctctttcatccgctacacccccaccaaatagccatggag
cccccaaggactcgatcgcgttctcgttccggatattaccagcagtacggcggtgggaac
ggcaatggaataaccggcagcggagtcatgggatctaaccatcaccaccatcaccaacag
cagcagcagcagcagcagcaacaactacatccacagcagcacggtgccggttgcgcacca
cttggagctcacagcaaccaccctgagaaccagccaagagccccaggaagtaacgcctct
cccggcattcagaggcttttttcggttcccggagcgcaccgcatcccggcggaaggagcc
tctggcgggtcataccactgccatccagatcatgcatatggagaggagagtgataagagc
gaagaaagccccagtccaaagcgccagaggctgtccagtcagtctgtcctagaacagata
acctcatccgcccccccaccttccaccccatctccccctatccgcccctgggaatcagga
cccccaagtcggagacagcctcacccccacccgcactaccaccaagagagatgcctcacc
cctgctcggcacagacgcagcccgccagcaaggcgtcagcgcggccgtctctcccgaccc
ccccgtcacctgcctccccaccaccaacaccacccttccacccaaagccccggccctcgc
ctgtcgccatccgagcgccaggatgagaactaccaccatcacccccccacacaccagaca
tacacgacgcacacgcccagcgcctacagtcagcctcccacagccggaggcggggcggta
ggcttggaggagccgcgagctttccatccccccaccctgtcgccacgacttctgcaccct
gctgcccaccatcatcaccttcaccaccaccatcagcagcagcagcagcagcagcagcag
cagcaccagcaccatcatgcagctcaacagcagcaaggagccatggtcatggacctacat
gaacagctgcagcaggccagtgtaccggtctcctacacggtgacccccgtccccccgcac
agcctggcagcgcccctgtgtagcggccagcatcttccccctacctgttcctcacaacag
caagtccccgcctgcagtgtggtcttcagcactggacaacactaccacccgatgctacag
gcttgttcaatgcaacatttgccgatgccctatgccttcccctcgctgctgtccggtgac
ccccagttcctgcttccccatccaccccacctcgctcaccacccgccccacctcccgacg
cccgcacagttcctgcctttccagacgcagcagccacgatcgcccttacagaggattgaa
aacgaggttgagcttctgggagagcagctttcagtgggcggaggctttagctacgcacac
caccaccatcaccaccatcaccaccagcctcccacccccctgcccccctccacaccgctc
cagttcctctcgcaccatgaccccctgtcgcaggagctcttcacagtgccctatccacac
tttatgcctcgccgattcacaagccgacgttaccgctctcagcaggctgtgcccccatca
ccctaccaccccagcttcctgccttacttcctgtctatgctccctgtgccgcccaatgta
gcccccaccatcaatctggagctggatgtagacgatggagaggtggagaactatgaggcc
cttttgaacctggcggagcgtctcggggaggccaagccccgcggtctaacaaaggcagat
atagaacagcttccatcgtaccggttcaactccaacaaccatcagtctgagcaaacaatg
tgtgtggtgtgcatgtgtgactttgagtctcgccagctcctcagggtcctgccctgtaat
cacgagttccacgccaagtgtgtagacaagtggcttaaggctaaccgaacctgtcctatc
tgtcgagctgatgcctctgaggtccagcgggattcagagtga
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