Eleginops maclovinus (Patagonian blennie): 134864441
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Entry
134864441 CDS
T09869
Symbol
htt
Name
(RefSeq) huntingtin isoform X1
KO
K04533
huntingtin
Organism
emac
Eleginops maclovinus (Patagonian blennie)
Brite
KEGG Orthology (KO) [BR:
emac00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
emac03019
]
134864441 (htt)
04131 Membrane trafficking [BR:
emac04131
]
134864441 (htt)
03029 Mitochondrial biogenesis [BR:
emac03029
]
134864441 (htt)
Messenger RNA biogenesis [BR:
emac03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
Common to processing body (P body) and stress granule
134864441 (htt)
Membrane trafficking [BR:
emac04131
]
Endocytosis
Rab GTPases and associated proteins
Rab associated proteins
134864441 (htt)
Mitochondrial biogenesis [BR:
emac03029
]
Mitochondrial quality control factors
Regulator of mitochondrial biogenesis
Other regulator of mitochondrial biogenesis
134864441 (htt)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Htt_C-HEAT
Htt_N-HEAT
Htt_bridge
Htt_N-HEAT_1
HEAT
HEAT_EF3_N
HEAT_2
HEAT_ECM29
Motif
Other DBs
NCBI-GeneID:
134864441
NCBI-ProteinID:
XP_063739467
LinkDB
All DBs
Position
5:complement(21796327..21835742)
Genome browser
AA seq
3167 aa
AA seq
DB search
MATMEKLMKAFESLKSFQQQQGPPTAEELVQRQKKEQATTKKDRVTHCLTICENIVAQSL
RTSPEFQKLLGIAMEMFLLCSDDSESDVRMVADECLNKIIKALMDSNLPRLQLELYKEIK
KNGASRSLRAALWRFAELAHLIRPQKCRPYLVNLLPCLSRITKRQEETVQETLAAAMPKI
MSALGHFANDGEIKVLLKSFVANLKSSSPTIRRTAASSAVSVCQHSRRTSYFYTWLLNVL
LGLLVPVDEEHPTHLILGVLLTLRYLMPLLQQQVNTSSLKGSFGVMRKEADVQPSPEQLL
QVYELTLHYTQHWDHNVVTASLELLQQMFRTPPPELLHMLITAGSILHGTVFRQDAESRA
RSGSILELIGKMLSGEEEGLEDDAERTEVTFTASVVGADGSSAAQVDIITEQPRSSQHTL
QPGESVDLSASSEQGGGGTSASDTPESPNDNEEEMLSRSSSGGANVTPETADYTTPETEA
APLGEGGPLLSTNDRSLPPSDSSQTTTEGPDSAVTPSDVAELVLDGSESQYSGMQIGTLQ
DEEEEGAAPSSQEEPHEPFIQSALALSKPHLFDGRGHNRQGSDSSVDRFIPKDEPAEPEP
VNKPSRIKGPIGHYTDQGAEPLVHCVRLLAASFLLTGQKNGLTPDKEVRVSVKALAVSCI
GAAAALHPEAFFNSLYLEPLDGTPVAEQQYISDMLGLADHGDPQIRGAIAILCAAIIQAA
LTKTRYNIHSWLASVQSATGNPLSLVDLLPLLQRTLKDESSVTCKMACSAVRHCLMTVCS
STLSELGLQLMIDLLALRDSSYWLVRTELLETLAEMDFRLVNFLERRTEHLHKGDHHYTG
RLRLQDRVLNDVVIRLLGDDDPRVRHVAASAVSRLVSRLFYDCDQGQVDPVVAIARDQSS
VYLQLLMHEAQPPSQFTVSTITRTYRGYNLSNNVSDVTIENNLSRVVTAVSHAFTSSTSK
AMTFGCCEALCLLATHFPVCTWCTGWHCGYVSSSSSFSSRSSLNRSRGRALSVSQTGSAP
ASSAPSSSDTERRTLTVGMANMVLSLLSSAWFPLDLASHQDALLLSGNLLAAVAPKCMRN
PWAGEEEGSGGSTNTSGGPNKMEEPWAGLSERSLVAMVEQLFSHILKILNICAHVLDDTP
PGPAVKATLPSLSNTPSLSPIRRKGKEKDAVEPSAVPMSPKKSVDINTGRPADGTGSTAV
NKSTTLGNFYHLPTYLKLYDVLKATHANYKVTLDLHTSQEKFGGFLRSALDVLSQLLELT
TLHDISKCVEEILSYLKSCFSREPTMATVCVQQLLKTLFGTNLASQCESVLSGPSRSQGK
ALRLGSSSLRPGLYHYCFMAPYTHFTQALADASLRNMVQAEQEQDTSGWFDVMQKASNQL
RSNIANATRQRGDKNAIHNHIRLFEPLVIKALKQYTTSTSVALQRQVLDLLAQLVQLRVN
YCLLDSDQVFIGFVLKQFEYIEVGQFRDSEAIIPNIFFFLVLLSYERYHSKQIISIPKII
QLCDGIMASGRKAVTHAIPALQPIVHDLFVLRGSNKADAGKELETQKEVVVSMLLRLVQH
HQVLEMFILVLQQCHKENEDKWKRLSRQIADVILPMIAKQQMHLDSPEALGVLNTLFETV
APSSLRPVDMLLKSMFTTPVTMASVGTVQLWVSGILAVLRVLVSQSTEDIVLSRVHELSL
TPHLLSCHTIRRLHQQSPSPSEPPADALCSQDGEAQKALPEETFARFLLQLVGVLLDDIS
SRQVKVDITEQQHTFYCQQLGTLLMCLIHVFKSGMFRRITAAASRLLKGEGGGVQPGAEA
GLFYPLESLNSMVQCMITTHPSLVLLWCQVLLIIDYTNYSWWAEVHQTPRRQSLSCTKLL
SPHSSGEGEDKPETRLAMVNREIVQRGALILFCDYVCQNLHDSEHLTWLIVNHVQDLINL
SHEPPVQDFISAVHRNSAASGLFIQAIQSRCDNLCAPTMLKKTLQCLEGIHLSQSGSLLM
LYVDKLLSTPFRVLARMVDTLACRRVEMLLAETLQNSKAQVPVEELNRIQEYLQTSGLAQ
RHQRFYSLLDRFRATVADTSSPTPPVTSHPLDGDPPPAPELVNADKEWYVALVKSQCCLR
GDVSLLETTELLTKLPPADLLNSMSCKEFNLSLLCPCLSMGMQRLARGQGSLLLETALQV
TLERLAGVTESLPVPHQSFLPPAQPQPYWKQLADVYDEPGFYPRVLSLCRALSQYLLSVS
QLPSSLHIPADKEHLITSFTCTAAEVVAWRLLQNQLPLSVDLQWALSCLCLALQQPCVWN
KLSTAEYATHTCSLIYCLRLIIVAVAVSPGDQLLHPEKKKTRAEKDAEGDEVDSAQVDHI
CEWQACEIMAELVEGLQSILALGHHRNSAFPAFLTPTLRNIVISLSRLPLVNSYTRVPPL
VWKLGWSPQPGGEYGTTLPEIPVDFLQEKDVFREFLYRINTLGWSSRTQFEETWATLLGV
LVTQPITMDQEEETQQEEDLERTQLNVLAVQAITSLVLSAMTLPTAGNPAVSCLEQQPRN
KSLKALETRFGRKLAVIRGEVEREIQALVSKRDNVHTHHPYHAWDPVPSLSAASAAGTLI
SHEKLLLQINTEREMGNMDYKLGQVSIHSVWLGNNITPLREEEWGEDEEDEADTPAPTSP
PTSPINSRKHRAGVDIHSCSQFLLELYSQWLIPGSPSNRRTPTILVSEVVRSLLAVSDLF
TERNQFDMMFSTLMELQKLHPPEDEILNQYLVPAICKAAAVLGMDKAIAEPVCRLLETTL
RSTHLPSRMGALHGVLYVLECDLLDDTAKQLIPTISEYLLSNLRAIAHCVNLHNQQHVLV
MCAVAFYMMENYPLDVGAEFMAGIIQVCGVMVSASEDSTPSVIYHCVLRGLERLLLSEQL
SRVDGEALVKLSVDRVNMPSPHRAMAALGLMLTCMYTAVLASGSDVTGVRGQVDCSSAEA
MGVTAGHVGFSSGKEKASPASRPAHSDPQAPDSESIIVAMERVSVLFDRIRKGLPSEARV
VARILPQFLDDFFPPQDVMNKVIGEFLSNQQPYPQFMATVVYKVFQTLHATGQSSMVRDW
VLLSLSNFTQRTPVAMAMWSLSCFFVSASTSQWISALLPHVISRMGSSEVVDVNLFCLVA
MDFYRHQIDEELDRRAFQSVFETVASPGSPYHQLLGCLQSIHQDTSL
NT seq
9504 nt
NT seq
+upstream
nt +downstream
nt
atggccaccatggagaaattgatgaaggcctttgagtctttgaagtcattccagcagcag
cagggaccaccaaccgcagaggagcttgtccagaggcagaaaaaagaacaggctactacg
aagaaggacagggtcacccactgtctgacaatatgtgaaaacatcgtggctcagtctctg
agaacgtctccagagtttcagaaactgctgggcatcgctatggagatgttcctgctctgc
agtgatgacagcgaatcagatgtccggatggtagccgacgagtgcttgaacaaaatcatt
aaagcgctgatggactccaacctgcctagactgcagctggaactgtacaaagaaattaaa
aagaatggtgcctctcggagtctgagggcggctctgtggaggtttgccgagctcgctcac
ctcatcagaccacagaaatgcagaccctacctggtgaacctgttgccatgcctctctcga
attaccaagcggcaggaggagacggtgcaggagactctggctgctgcaatgcctaagatc
atgtctgccttggggcacttcgccaatgacggcgagatcaaggtgttgctgaagtcattt
gtggccaacctgaagtccagctcccccaccatcaggcgcacagcagccagctccgctgtc
tccgtgtgccaacactccagacgcaccagctacttctacacttggctccttaatgttctg
ctgggtctgctggttcctgtggatgaggagcaccccacccacctaattctgggggtgctg
ttgacccttcgctacctgatgcctctgctgcagcagcaggttaacacatccagcctcaaa
ggaagcttcggagtcatgaggaaggaggctgacgtccagccctcacctgagcagctcctt
caggtgtacgagctgactttacactacacgcagcactgggatcacaatgtggtcacagca
tctctggagctcctgcagcagatgttcaggacccccccgccagagctcctgcacatgctc
atcacggcgggcagcatcctgcatggcaccgtgttccggcaggacgccgagagccgcgct
cgctccggcagcatcctcgagctcattggtaaaatgctctctggagaggaggaaggtttg
gaggatgacgctgaaagaacagaggtcacattcacagcgtcagtcgtcggtgcagacggc
tcctctgcggcccaggtggacatcatcaccgagcagccgcgctcctcccagcataccctg
cagcccggcgagtctgtggacctcagtgcctcctcggagcagggcggaggcgggacttcg
gcttcagacactccagagtcacccaacgacaacgaggaggaaatgctgagtcgcagctcc
agcggtggggccaacgttactccggaaacggccgactacaccacaccagagaccgaggca
gcgcccttaggagaaggcgggcctttgctcagcaccaacgaccgctcacttccacccagc
gactcctcgcagaccaccacggaggggcccgactcagccgtcaccccttcggacgtagca
gaactggtgctggacggcagtgagagccagtactccgggatgcaaatcgggacattgcag
gatgaagaggaggaaggagcagccccttcgtcccaggaagagccccacgagcccttcata
cagtcagcactggctctgagcaaacctcatctcttcgatggccgaggccacaaccggcag
ggttcggacagcagcgtggaccgcttcataccgaaggacgagcctgccgaacccgaacct
gtcaacaagccatcacggataaaggggccaatcggacattatacagaccagggggcggag
ccactggtgcactgtgttcggcttcttgctgcttccttcctactgacaggacagaaaaat
ggtctgacccccgataaggaggtgcgagtgagcgtgaaggctctggcggtcagctgcatc
ggggcggcggcagcgctccaccctgaagccttctttaattccctctacctggagccgctg
gacggcactccagtagcagaacaacagtatatcagtgacatgctgggcctggctgaccac
ggggacccccagatcagaggggccatagccatcctctgcgcagccatcatacaagccgca
ctcaccaaaacacgctacaacatacacagctggctggccagtgtgcagagtgcaacaggt
aaccctctgtccctggtggatttgttgcctttgctccagagaactctgaaagatgaatcc
tccgtcacctgcaagatggcctgctctgcagtgaggcactgcctcatgacggtgtgcagc
agtaccctgagtgagctgggccttcagttgatgatagaccttctcgctctgagggactct
tcctattggctcgttcgcactgagcttttggagactctggcagagatggactttcggtta
gtgaatttcctggagaggagaacagaacatttgcacaaaggggatcatcactacactggg
cggctgcggctgcaggaccgagtcctgaacgatgtggtcatccgactgttgggggatgac
gaccccagagtccgacacgtggcagcatcagctgtcagcagactggtttccaggttgttc
tacgactgcgaccagggtcaagtggacccagtagtggcgattgctcgcgaccagagttca
gtctacctgcagctgctgatgcacgaggcccagcccccctcccagttcacagttagtacc
atcacaaggacgtacagaggctacaacttgtccaacaacgtgtctgatgtcacaatcgag
aacaatttgtccagagtcgtcaccgccgtctcccacgctttcacctcctctacctccaaa
gccatgacttttggctgctgtgaggccttatgcctcctggctacacatttcccagtgtgc
acttggtgtacaggctggcactgcggctatgtgagctccagcagcagcttctcttcccgc
tctagtctgaaccgcagcaggggccgggccctcagtgtatcacagaccggcagtgctccg
gcctcttcagccccctcctcgtctgacactgagcgcaggactctgacagtaggcatggcc
aacatggtgctctccttactctcctctgcctggtttccactggatctggcctcacaccaa
gatgcacttctgctgtctggcaatctgcttgctgctgtggctcctaaatgcatgcgtaac
ccctgggctggagaggaggaaggcagcggtggtagcaccaacaccagtggaggccccaat
aagatggaggagccctgggcagggctgtcggagcgctccctggtggccatggtggagcag
ctcttctctcacatactgaagatcctcaacatctgcgcccacgtgctggacgacacaccg
cccggacctgctgttaaagccaccctcccctccctgagcaacaccccctccctcagtccc
atcaggaggaaaggcaaggagaaggatgccgtggagcccagtgctgtccccatgagccca
aagaagagcgttgacatcaacacaggcaggccagcagacggcactgggtccaccgctgtg
aacaaatctaccaccctcggcaacttctaccacctgcctacctacctcaagctctacgac
gtcctcaaagccacgcacgccaactacaaggtgacgctggacctccacactagccaggag
aagttcggaggatttctgcgttcagctctagatgttctctctcagctcctggagctcacc
acactgcatgacatcagcaagtgtgtggaggaaatcttgagctacctgaagtcctgcttc
tccagagaacccaccatggcaacagtttgtgtacaacagctgttgaagaccctgtttggc
accaacctggcctctcagtgcgagagcgtcctgagcggacccagccgctcccagggcaag
gctctgcgcctcggctcctccagcctgcgcccaggcctctaccactactgcttcatggcg
ccgtacacgcacttcacccaggctttagctgatgccagcctacgcaacatggtgcaggct
gaacaggagcaggacacctctgggtggtttgatgtgatgcaaaaagcttcgaaccagctg
cggtccaacattgcaaacgcgacacgccaaagaggagacaagaacgccatccacaaccac
atccgtctgtttgagccgctggtgatcaaagctctgaagcagtacaccaccagcacctcg
gtggcgctgcagagacaggtcctggacctgctcgcacaactggtgcagctcagagttaac
tactgcctgctggactctgatcaggtgttcatagggtttgtcctgaagcagtttgagtac
attgaagtgggacagttcagagattctgaagccatcatccccaacatctttttcttcctg
gtgctgctttcatacgagcgttaccactccaagcagataatcagcatccccaagatcatc
cagctgtgtgacggcatcatggccagcggcaggaaagctgtcacacatgccatcccagcc
ctgcagccaatagtccacgacctgtttgtgttgaggggctccaacaaagcagacgcaggc
aaagagttggagacacagaaagaggtggtggtgtccatgctgctcagactggtgcagcac
catcaggtgttggagatgttcatcctcgtgctgcagcagtgtcacaaagagaatgaggac
aaatggaagagattgtcgaggcagatcgctgacgtcatccttcccatgattgctaagcag
cagatgcacctggactccccggaggcattgggggtgttgaacactctctttgagacggtg
gcgccctcctctctccgacctgtggacatgctgctcaagagtatgttcaccaccccggtt
accatggcttccgtaggtacggtgcagctgtgggtgtccgggatcctggcggtgctccgg
gtgctcgtctcccagtctactgaggacatcgtcctgtcccgggtccacgagctctccctc
acacctcatctcctctcctgccacacgatccgtcgcctgcatcagcagagcccctccccg
agcgagccccctgccgacgcactctgcagtcaggacggtgaggcacagaaagccctgcct
gaggaaaccttcgccaggttcctgctgcagctggtaggggtgttgctggatgacatttcc
tccagacaggttaaggtggacatcacagagcagcagcacaccttctactgccagcagctg
ggcaccctgctcatgtgtctcatacacgtcttcaaaagtggaatgttccgcagaatcacc
gctgcagccagccgcctcctgaagggtgagggtggaggtgtgcagcctggcgcagaggct
ggccttttttacccactagagtctctgaacagcatggtgcagtgcatgatcaccacccac
ccctccctggtgctgctgtggtgccaggtcctcctcatcatcgactacaccaactactca
tggtgggcggaggtgcaccagacacccaggagacaaagcctctcgtgcacaaagctgctg
agtcctcactcttcaggggaaggagaagacaagcctgagacccggttagctatggtcaac
cgggagatcgttcaaaggggagcgctcatcctcttctgtgactacgtgtgtcagaacctc
catgactcggagcatctgacctggttgatcgtcaaccacgtgcaagacctcatcaacctt
tcccatgagcctccagttcaggacttcatcagcgccgtgcaccgcaactcagctgccagc
ggcctcttcatccaggccatccagtcccgctgtgacaacctctgtgctcctaccatgttg
aagaagactttgcagtgtctggaaggcatccacctgagtcagtccggctccctgctgatg
ctgtacgtggacaagctgctcagtacgcccttcagggttctggcccgcatggtggacaca
ctggcgtgtcgcagggtggagatgctgctggctgagacactacagaacagtaaagctcag
gtgcctgtggaggagctcaacaggatccaggaatacctacagaccagcggcctggctcag
aggcatcagaggttctactccctgctggacaggttcagagccactgttgccgacaccagc
agccccacacctcctgtgacgtctcaccctctggacggagacccgcctcctgccccagag
ctggttaatgcagataaggagtggtacgtggctctagtgaagtcccagtgttgtctccgt
ggagatgtttccctgttggagacgacagaactcctcaccaagctacctcccgctgacctc
ttaaacagcatgagctgcaaggagttcaaccttagcctgctgtgtccatgcctgagtatg
gggatgcagcggttggcccggggtcaggggtcgctcttgttagagacagccttgcaggtg
accttagagcggcttgcaggggtaactgagtcacttcctgtaccgcaccagtccttcctg
ccgccagcacagccacagccctactggaaacaactagctgatgtgtatgatgagccaggt
ttctaccccagggttctgtcgctgtgcagagcgctgtcccagtacctgctgagtgtgagc
cagctgccgtcctcactacacatccccgcagacaaggaacacctcatcacctctttcacc
tgcaccgctgccgaggtggtggcgtggcgtctcctccagaaccagctgcccctcagtgtg
gacctgcagtgggctctgtcctgcctgtgcctggccctgcagcagccctgcgtctggaac
aaactctccaccgcggagtacgccacgcacacctgctccctcatctactgcctccgcctc
atcatcgttgcagttgctgtgagtcctggtgaccagcttctgcatccggagaagaagaag
acgagggcggaaaaagacgccgaaggagacgaggtagactcggcacaagttgaccacatt
tgtgagtggcaggcatgcgaaatcatggcggagctggtggaaggcctgcagagcatcctg
gccctgggtcaccatagaaacagtgcattccccgctttcctcacaccaaccttgcgcaac
attgtcatcagtctgtcccggctgcctctggtcaacagctacaccagagtacctccactg
gtttggaaactgggctggtcccctcagccaggaggagagtacggtaccacgctgcctgag
atccctgtggacttcctgcaggaaaaggatgtcttcagagagttcctctaccgcatcaac
acactgggctggagcagcagaactcagtttgaagagacctgggccacactactgggggtg
ctggtcacccaacccatcactatggaccaggaggaggagactcagcaggaggaggacttg
gagcgtacccagttgaatgtgttagcagtgcaggccatcaccagcctggtgctgagtgcc
atgaccctgcccactgctggcaaccctgcagtcagctgtctggaacagcaaccccgcaac
aagagcctcaaagccctggaaacacggtttggaaggaaactggcagtgatccgaggcgag
gtggagagagagattcaggcccttgtgtcgaagagagacaacgtccacacacaccacccg
taccacgcctgggaccctgtgccctcgctgtcggcagcctctgccgcaggcacactgatc
agccatgagaagctgctgcttcagatcaacacagagagggagatgggaaatatggactac
aaactaggacaggtctctatccactcagtgtggctaggtaacaacatcaccccactgaga
gaggaagaatggggggaggatgaagaagatgaagcagacactccagcccccacctccccg
cccacatctcctatcaactccaggaagcaccgtgcaggggtggacattcattcatgttcc
cagttcctcctggagctctacagtcagtggctgatccctggctccccgagtaacaggagg
accccaaccatcctcgtcagtgaggtggtccgatcgctgctggcggtgtcggacctgttc
acagagaggaaccagttcgacatgatgttctccaccctgatggagctgcagaagctccac
cccccagaggatgagatcctcaaccaatacctggtgcctgccatctgcaaggctgctgcc
gtactgggaatggacaaagcaatagcggagcccgtgtgccgcctgttggagacgaccctg
cgcagcacccacctgcccagccgcatgggggctctgcatggagtgctgtacgtgttggag
tgtgacctgctggacgacacggccaaacagctcatccccaccatctccgagtacctgctg
tccaacctgcgggccatcgctcactgtgtgaacctgcacaaccagcagcatgtgttggtg
atgtgcgccgtggccttctacatgatggagaactaccctctggatgtgggggcggagttt
atggctggcattatacaggtgtgtggtgtgatggtgtctgccagcgaggactccaccccc
tccgtcatctaccactgtgtgctgcggggtctggagcgcctgctgctgtcggagcagctg
tcccgcgtggacggagaagcgctggtcaaactcagcgtggaccgagtcaacatgccttcc
ccacacagagccatggccgccctgggcctcatgctcacctgcatgtacaccgcggtgctt
gcgtcgggttcagacgtgacaggggttagaggtcaggttgactgttcctcagcagaggcg
atgggcgtcacggcgggtcatgttggtttctcctcaggcaaggagaaagccagccctgcc
agtcgccccgcccactctgaccctcaagccccggacagcgagtcaatcattgttgccatg
gagagggtctctgtgctgtttgacaggattcggaaaggtttacccagcgaggctcgggtc
gtggccaggatccttccccagtttctggacgatttcttccccccacaggacgtcatgaac
aaggttatcggcgagttcctgtccaatcagcaaccttacccacaattcatggccactgtc
gtctacaaggtgttccaaaccctccacgccacaggacagtcctctatggtgcgagactgg
gtgctgctgtccctgtctaacttcacccagaggactccggtggccatggccatgtggagc
ctctcctgtttctttgtctcggcctccacctcccagtggatctctgccctactgccacat
gtgatcagccgtatgggctccagcgaggtggtggacgtcaacctgttctgcctggtggcc
atggacttctaccggcaccagatcgacgaggagctcgaccgcagggctttccagtccgtc
ttcgagaccgtggcgtcgccagggagcccctaccaccagctgctgggctgcctgcagtcc
atccaccaggacacgtccctctga
DBGET
integrated database retrieval system
