Eleginops maclovinus (Patagonian blennie): 134864728
Help
Entry
134864728 CDS
T09869
Symbol
rfc1
Name
(RefSeq) replication factor C subunit 1 isoform X1
KO
K10754
replication factor C subunit 1
Organism
emac
Eleginops maclovinus (Patagonian blennie)
Pathway
emac03030
DNA replication
emac03410
Base excision repair
emac03420
Nucleotide excision repair
emac03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
emac00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
134864728 (rfc1)
03410 Base excision repair
134864728 (rfc1)
03420 Nucleotide excision repair
134864728 (rfc1)
03430 Mismatch repair
134864728 (rfc1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
emac03032
]
134864728 (rfc1)
03400 DNA repair and recombination proteins [BR:
emac03400
]
134864728 (rfc1)
DNA replication proteins [BR:
emac03032
]
Eukaryotic type
DNA Replication Elongation Factors
RFC (replication factor C)
134864728 (rfc1)
DNA repair and recombination proteins [BR:
emac03400
]
Eukaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
RFC (replication factor C)
134864728 (rfc1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RFC1
AAA_lid_RFC1
BRCT
AAA
PTCB-BRCT
AAA_22
AAA_5
RuvB_N
AAA_30
AAA_33
BRCT_2
AAA_17
AAA_14
AAA_18
AAA_16
AAA_7
nSTAND3
RNA_helicase
NTPase_1
AAA_19
Motif
Other DBs
NCBI-GeneID:
134864728
NCBI-ProteinID:
XP_063740001
LinkDB
All DBs
Position
5:complement(13675241..13685093)
Genome browser
AA seq
1184 aa
AA seq
DB search
MDIRRFFAPTAAKPAVQKPASNGNIKTEEQKKKKKKNPLSSDEEVKKKETPKVKNSKTEE
KLKDSDKKRKKQAVIVSDSEDEEPVRKSKKSPKEKEKKNKTETPPKKDPVQYVSETDSDS
DSFQTLKKVSKTKPKQNGTAKQTKSDARPGAKEGLKSPVTPSSTKGKTAVKSPPTPVTPK
SAPPPAPKHTPTSVLNYFGSAAVQRSDKKLVASTKRKAPTQDTDDLSDEQIAKQLQMDED
IELEKQVHEDEEFARTLAMLDEEPQAKKARKGSEDKPSPTKLPRKSSPDSAAGSMSSPSK
ISRKGSVSEDAISPTPKKNPASVRASSKLATMKKEEEQRNVSSKSKTLISPFKIKISPKK
EPVASPSKEKKFTPKSGTTVKTSPKKPEMSKSTSTSTSPDDAEKKRNTAAFRNFLNRDGP
RALGSKEIPQGAENCLEGCVFVLTGVMESMERDDAKSLIERYGGKVTGNISKKTTFMVQG
RDSGVSKLEKAESFGTKILDEDGLLELIRTKPGKKSKYEIAAEAENKASKTRTTPGKTSK
STPKSQKISPSKGNSRSPHTPSPSKTGLASGHGTRTRESGTPPGRGSAHTARRELGLSSS
SASSPSAKGEDASLLWVDKYRPLSLKAVIGQQGDQSCANKLVRWLQNWHRHHGSGTSKPP
AARFGKFGGKDDGSGFKAALLSGPPGVGKTTTAALVCEELGFSFVEMNASCTRSKNSLKE
VVSESLNNTSIEGFYKGTSQKVTSKHVLIMDEVDGMAGNEDRGGIQEMIGLIKTSKIPII
FMCNDRNHMKIRSLANYCFDLRFQRPRVEQIKGAMMSLAFKEGIKIPPPALNEIILASNQ
DIRQVIHNLSMWSAKDKVMTYDRCKSDAANARKDMKMGPFDVCRKVFAFGDETAHMSFID
KSDLFFHDYSLAPLFVQENYLHVRPKAAGGDLKAHLMLLSKTADSISDGDLVDRRIRSGQ
NWSLLPTQAVYASVLPGELMRGYMSQFPTFPSWLGKHSSTSKHSRIVQELSSHMGLKTMS
SRQAVNLDYLFYLRQALLSPLQRHGAEGAAEAVKLLDDYQLIREDVDSIMEISLWGGQPD
PYCKLESKVKAAFTRAYNKEAHLTPYSLQVVKKGRRGGAGEAELGGEEVDNEAQESEDEG
VKVDAMIKQKKAKPTKETKKKKEDSGKGKKEDSGKGKGKGKAKK
NT seq
3555 nt
NT seq
+upstream
nt +downstream
nt
atggacatcaggaggttctttgcaccgactgcagcaaagcctgcggtgcagaaaccagct
tcaaatggaaacatcaaaacagaggagcagaagaaaaagaaaaagaagaatcctctctct
tcagacgaggaagtgaaaaagaaagagacccccaaggtgaaaaactccaagacagaggag
aaactcaaggatagtgacaaaaaacggaagaagcaagcagtcatagtgtctgactccgag
gacgaggagccagtgagaaagtcaaagaaatcccccaaagagaaagagaagaagaacaaa
acagagacacctcccaaaaaggatcctgtgcagtatgtctctgagacagactcagacagc
gactcatttcagaccctgaagaaggtctccaaaactaaacccaagcagaatggcacggcc
aaacagacaaagtcagatgctcgtcccggagccaaagagggactgaagtctcctgtcact
ccctcctccacaaaggggaaaactgcggtgaagtctcctcctaccccagtcacccctaag
tcagccccgcctcctgcccccaaacacacccccacctcagtattaaactacttcggcagt
gcagccgttcaacgttcagataagaagctcgtagccagcaccaaacgaaaggcgccaact
caggacacagatgatctgagtgatgagcaaatcgccaagcagctgcagatggacgaggac
atagagctggagaagcaggtccatgaggatgaagagtttgccagaactctggccatgctg
gatgaggagcctcaagcgaagaaggctcgtaaaggctctgaagataaaccatcccctaca
aaattacccagaaagagcagtccagattccgctgccggcagcatgagcagtccgtcaaag
atcagccggaaaggcagcgtgtcggaggatgcgatcagtccgacccctaagaagaacccc
gcctccgtcagagccagctccaaactggccacgatgaagaaagaggaagaacagagaaat
gtatcgtcaaagagcaaaacacttatttcgcccttcaaaataaaaatttcccccaagaag
gagcccgtcgcttctccgagcaaagagaagaaattcactcccaaatcaggaaccacggtt
aaaacatctcccaagaaaccagagatgagcaagagcacgagtacgagtacgagtcctgac
gacgcagagaagaagaggaacactgcagctttcaggaacttcctcaacagggacggacca
cgagctctgggctcaaaggaaatccctcagggtgcagagaactgtttggagggctgtgtg
tttgtgctgacgggggtcatggagtccatggagagggatgatgctaaatccctgatcgag
cgctacggaggcaaggtgacaggcaacatcagcaagaagaccaccttcatggtgcaaggc
agagacagcggagtctccaaacttgagaaggcagagagttttggaaccaagatcctggat
gaagatggtctgttggagctgatcagaaccaaacctggaaagaagtccaagtacgagatc
gctgcagaagctgagaacaaggcttccaagaccaggactacccccggcaagacatccaag
agcaccccaaaatctcagaagatctctccctctaagggtaactcccggtcccctcacacc
ccaagcccgtcaaagaccggcctggctagtggccacggcaccaggaccagagagagcggc
actccgcctgggaggggctctgctcacacagcccggagggagctgggcctctcctcctcc
tcagcatcctccccatcagcgaaaggggaggacgccagcctgctgtgggtggacaagtac
cgcccgctctctctgaaggctgtgattggccagcagggagatcagagctgtgccaataag
ctggtccgctggctgcagaactggcaccgacaccacggcagcggcacctccaaaccacca
gcagctcggttcggaaagtttggaggcaaagatgacggatcaggattcaaagctgctctg
ctctctggacctccgggcgtggggaagaccaccacagcggccctggtctgtgaggagttg
ggcttcagctttgtggagatgaacgccagctgcactcgcagcaaaaacagtttgaaggaa
gtcgtgtcagagtccctcaacaacacaagcatcgagggcttctacaaaggcacgtctcag
aaagtgaccagtaagcacgtcctgatcatggatgaggtcgatggcatggctggcaacgag
gaccgcggaggaatccaggagatgatcggcctgatcaaaacgtcaaagattcccatcatc
ttcatgtgcaacgatcgcaaccatatgaagatcaggtcgctggccaactactgcttcgat
ctgcgcttccagaggccacgagtggaacagatcaagggagccatgatgtctcttgctttc
aaggagggaatcaagatcccccctccagctcttaatgagataatcctggcctccaatcag
gatatccgacaggtgattcacaacctcagcatgtggtcggccaaagacaaggtgatgacg
tacgatcggtgcaagtcggatgcagccaacgcccgcaaggacatgaagatggggccgttt
gacgtctgtaggaaggtgtttgccttcggggatgagaccgcccacatgagcttcatcgac
aaatctgacctcttcttccacgactactcgctagcgccgctctttgtccaggagaactac
ctgcatgttcggccaaaggctgccggtggggacctgaaggcccacctgatgctgctcagc
aagacggcagactccatatctgacggagacctggtggaccgacggatccgctcggggcag
aactggtcactgctgcccacccaggctgtctatgccagtgtgttacccggcgagctgatg
agaggctacatgagtcagttccccaccttccccagctggctcggcaagcactcctccacc
agcaaacactcgcgcatcgtgcaggagctttcctcacacatgggtttaaagacgatgagc
agcagacaggcggtgaacctggactacctgttctacctgcggcaggcgctgctgagcccg
ctgcagaggcacggagcggagggcgccgccgaggctgtgaagctgctggacgactaccag
ctgatcagggaggacgtggatagcatcatggagatcagcctgtggggcgggcagccagac
ccctactgtaaactagagtctaaggtgaaagcagcgttcacacgggcatacaacaaagag
gctcacctgacgccgtactctctgcaagtagtgaagaagggccgccgcggtggagcgggg
gaggcagagttgggaggagaggaggtggacaatgaagcgcaggagtctgaggacgagggc
gttaaagtggacgccatgatcaaacagaagaaggccaaacccaccaaggagacgaagaag
aagaaggaggattctgggaaggggaagaaggaggattctgggaaggggaaaggcaaagga
aaggccaagaaataa
DBGET
integrated database retrieval system
