Eleginops maclovinus (Patagonian blennie): 134864769
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Entry
134864769 CDS
T09869
Symbol
exosc1
Name
(RefSeq) exosome complex component CSL4
KO
K07573
exosome complex component CSL4
Organism
emac
Eleginops maclovinus (Patagonian blennie)
Pathway
emac03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
emac00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
134864769 (exosc1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
emac03019
]
134864769 (exosc1)
Messenger RNA biogenesis [BR:
emac03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Core exosome factors
134864769 (exosc1)
Prokaryotic type
Archeal mRNA degradation factors
Exosome components
Core exosome
134864769 (exosc1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
EXOSC1
ECR1_N
RRP4_S1
ECR1_N_2
Motif
Other DBs
NCBI-GeneID:
134864769
NCBI-ProteinID:
XP_063740069
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All DBs
Position
5:18034408..18038978
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AA seq
194 aa
AA seq
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MSPMKLCVPGDKLCSTEDCIPGTGVYLRHGCIYSSLTGYVLKKNEGEELPVISVVRETET
QLLPDVGAIVTCKVTSINPRFAKVHILYVGSTPLKDRFRGTIRKEDVRATEKDKVETYKS
FRPGDIVLAKVISLGDVQSNYLLTTAENELGVVVAHSEAGAQMVPISWCEMQCPQTHSKE
FRKVARVQPEFLQA
NT seq
585 nt
NT seq
+upstream
nt +downstream
nt
atgtcgcccatgaagctgtgtgttccaggtgacaagctctgcagcacagaagactgtatt
cccggcacaggagtatatctgcgacacggctgcatttactcctcactcacaggctatgtg
cttaagaaaaacgaaggcgaggagttaccagtgatctcggttgtgcgggaaacagaaaca
caactactaccagatgtaggagcaatagtcacctgtaaggtgaccagcattaaccccagg
ttcgcaaaagtccatatcctttatgtaggctccacaccgctgaaggaccgcttcagagga
acaatcaggaaagaagatgtgcgcgcgacagagaaagacaaggtggagacgtacaaaagc
ttccgacctggcgacatagtcttggccaaagttatttctctcggagacgtgcagtctaac
tacctgttgacaacggcagagaacgaactgggggtggtggtggcacacagtgaagcaggt
gcccagatggttcccatcagctggtgtgagatgcagtgcccgcagacgcacagcaaagaa
ttccgcaaagttgcgcgagtgcagccggagtttctacaggcatga
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