Eleginops maclovinus (Patagonian blennie): 134864809
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Entry
134864809 CDS
T09869
Symbol
clstn1
Name
(RefSeq) calsyntenin-1 isoform X1
KO
K22659
calsyntenin 1
Organism
emac
Eleginops maclovinus (Patagonian blennie)
Brite
KEGG Orthology (KO) [BR:
emac00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
emac04515
]
134864809 (clstn1)
Cell adhesion molecules [BR:
emac04515
]
Cadherins
Cadherin related
134864809 (clstn1)
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
CLSTN_C
Cadherin
Laminin_G_3
CDC45
Laminin_G_2
FAM176
Cadherin_C_2
Toxin_R_bind_N
V_ATPase_I
EphA2_TM
DUF7502
PFF1_TM
Motif
Other DBs
NCBI-GeneID:
134864809
NCBI-ProteinID:
XP_063740145
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All DBs
Position
1:complement(12943614..12977501)
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AA seq
981 aa
AA seq
DB search
MRVRGNTPFASAVGLVLGLLCAVEAAKVNKHKPWIETTYHGIVTENDDKVLLDPPLIALD
KDAPLRYAESFEVTLTEEGEICGFRIHGQNVPFEAVVLDKSTGEGVLRAKDKLDCELQKE
HTFTIQAYDCGEGPDGTNMKKSHKATVHIQVNDINEYSPVFKEKSYKATVIEGKKYDSIL
KVEAVDADCSFQFSQICNYEIVTPDVPFTVDKDGFIKNTEKLSYGKERMYKLTVTAYDCG
KNRASEDVLVKISVKPTCKPSWQGFNKRTEYEPGTGSLALFPSMHLETCDEPITSIRANI
ELETNHIGKGCDRDTYSEKSLHKLCGASTGTVELLPAPSSSANWTVGLPTDNGHDSDQVF
EFNGTQAIKVPEGMVSTSLKEPFTISVWMRHGPGAHEKETILCNSDKTEMNRHHYSLYVH
NCRLILLLRQDPSEAENYKPAEFHWKLDQACDKEWHHYVLNIEFPTVSLFVDGTTFEPFL
VTEDYPLHSTKIESQLTIGACWQDNSGHDNDTESVSEPTSGGNAKMAQFFRGNLAGLMIR
SGKLENKKVIDCLYTCKEGLDVQLPEEVASAVKVEFNPNQSSLTVEGDDIDAFDKVMQHI
SYLNSRQFPTPGIRHLRISTTVKCFNEESCVSVPDAEGYVMVLQPEEPKISLSGIDHFAR
SAAEFESQEGVALFPELRIVSTITREVEADAESEAAEGTEDDPTVQETVVSEEIMHNLDT
CEVSVVGDELDGEHEGLEVDMSQLQQHSLEMSSSNLGLVITGVNTMANYEQVLHLIRYKN
WHTEALFDRKFKLVCSELNGRYISNDFKVEVNVIHTANPVENANNAMVQPNFINPVHHAS
VDLSGHNLVNAHQASVVPSAATIVIVVCVSFLVFMIILGVFRIRAAHQSTMRDQETGKEN
EMDWDDSALTITVNPMETYEDQHSSEEEEEEEEESEDGEEEDDITSAESESSEDEEGGEP
EDQQAASRQQQLEWDDSTLTY
NT seq
2946 nt
NT seq
+upstream
nt +downstream
nt
atgcgggtccgagggaatacaccatttgcatccgctgtcggactggtcctcggactatta
tgtgcggtggaggcagctaaagtcaataagcacaaaccatggatcgagacgacgtaccac
gggatcgtaacggaaaacgatgacaaagtactcctggaccctcctctaattgcactggac
aaggacgctcctctacgctacgcagagagttttgaggtgactctcactgaagaaggtgag
atttgcggcttcaggattcacgggcagaatgtccccttcgaggcagtggtcctggacaag
tccactggtgagggggtcctccgggccaaggacaagctggactgtgagctgcagaaggag
cacaccttcaccatccaagcctacgactgtggagagggtcccgatggcaccaacatgaag
aaatcccacaaggcaaccgtccacatccaggtcaacgacatcaacgagtattcaccggtg
ttcaaagagaagtcctacaaagccaccgttatcgaggggaagaagtatgacagcatcctg
aaggtggaggcagtggacgccgactgctctttccagttcagtcaaatctgcaactacgag
atcgtcacccctgatgtgcccttcaccgtcgacaaagatggtttcatcaagaacacagag
aaactgagctacggcaaggagcgcatgtacaagctgactgtgaccgcctacgattgtgga
aagaaccgtgcctccgaggatgttctggtcaagatcagcgtcaagcccacctgcaaaccc
agctggcaaggcttcaataagaggactgaatacgagcctggcacaggcagcctggccctt
ttccccagcatgcacttggagacctgtgatgagccaatcacgtccatccgagccaacatt
gaactggaaaccaaccacattggaaagggctgcgaccgtgatacctactctgagaagtca
ctgcacaagctgtgcggagccagcaccggcaccgtggagcttcttcctgcacccagcagc
tccgccaactggacggtcgggctgcccacagacaacgggcacgacagcgaccaggtgttt
gagtttaacggcacccaggccatcaaggttcctgaaggcatggtgagcaccagcctgaaa
gagcccttcactatctctgtttggatgagacacggccccggggcccacgagaaggagacc
atcctctgcaactctgacaagacagagatgaacagacaccactactcgctgtacgtccac
aactgccggctgatcctgctcctccgccaggatccatcagaggccgagaactacaaacca
gccgagttccactggaagctggaccaggcttgtgacaaagagtggcatcactacgtgctt
aatattgagttccccaccgtgtctctgtttgtggatgggactacctttgagcccttcctg
gtcacagaggactacccactgcactccaccaagatcgaatcccagctcaccatcggtgcc
tgctggcaagacaactcaggacatgacaatgacactgagtcagtctctgagcccacctca
ggtggaaatgctaaaatggctcagtttttccggggcaacctagcggggctgatgattcgc
tctggcaagctggagaacaagaaggtgatcgactgtttgtacacctgcaaggaaggactg
gacgtgcagctgcctgaggaggtagcttcagctgtcaaggttgagtttaaccccaaccag
tcctctctgaccgtggagggagacgacatcgatgcctttgacaaggtcatgcagcacatc
tcctacctgaactctcgccagttccccacccctggtatcaggcaccttcgcatctccacc
accgtcaaatgcttcaacgaggagtcctgcgtatcagtgccagatgccgaaggttacgtg
atggtgctgcagcccgaagagcccaagatcagcctgagcggcatcgaccattttgcccgc
agcgccgcagaattcgagagccaggaaggcgtggcgctgttccccgagctacgcatcgtg
agcaccatcacccgcgaggtggaggctgatgctgaatctgaagcagcagagggaactgag
gatgaccctacagtccaagagaccgtggtgtccgaggagatcatgcacaacctggacaca
tgtgaagtgagcgtggtgggagacgagctggacggggagcacgagggtctagaggtggac
atgtctcagctgcagcagcacagcctggagatgagctcctctaacctgggcctcgtcatc
actggcgtgaacaccatggccaactacgagcaggtcctgcatctcatccgttacaagaac
tggcacacagaggctctctttgacaggaaattcaaactggtctgttctgaactcaacggc
cgctacatcagcaacgacttcaaggtcgaggtgaatgtaatccacacagccaatcctgtg
gagaatgccaacaacgccatggtgcagcccaacttcatcaaccctgtgcatcacgcctct
gtggatctgtccggtcacaacctggtcaacgctcaccaggcctcagtcgttcccagcgca
gccaccattgtcatcgtggtgtgcgttagcttcctggtgtttatgatcatcctgggcgtg
ttccgcatccgagctgcacaccagagcaccatgagggaccaggagaccggcaaggaaaac
gagatggactgggatgactcagccctcaccatcacggtcaaccccatggagacgtacgag
gaccagcacagcagcgaggaggaggaggaagaggaggaggagagcgaggacggagaggag
gaagatgacatcacaagcgctgagtcagagagcagcgaagacgaggagggcggagagccc
gaagaccagcaggcggccagcagacagcagcagctggagtgggacgactccaccctcacc
tactaa
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