Eleginops maclovinus (Patagonian blennie): 134865167
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Entry
134865167 CDS
T09869
Symbol
fip1l1b
Name
(RefSeq) pre-mRNA 3'-end-processing factor FIP1 isoform X1
KO
K14405
pre-mRNA 3'-end-processing factor FIP1
Organism
emac
Eleginops maclovinus (Patagonian blennie)
Pathway
emac03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
emac00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
134865167 (fip1l1b)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
emac03019
]
134865167 (fip1l1b)
Messenger RNA biogenesis [BR:
emac03019
]
Eukaryotic type
mRNA processing factors
3' end processing
Cleavage and polyadenylation specificity factor (CPSF) complex
134865167 (fip1l1b)
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Fip1
Motif
Other DBs
NCBI-GeneID:
134865167
NCBI-ProteinID:
XP_063740682
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All DBs
Position
5:complement(12456815..12465067)
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AA seq
556 aa
AA seq
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MSAEEADKTGTTDASGGDEEEEWLYGDEPEGTEEDEEAKLNAAVSAPADASTEDAAEHAT
GNGVASEATVEGEGVTEDVDSDSDSDDDDDDVRVTIGDIKTGAPQYTTYGAPPVNLNIKT
SGSRPYGQASKMKGVDLDGPGNINGVPVLEADMETFEEKPWRKPGADLSDYFNYGFNEDT
WKSYCEKQKRLRMGLEVSTVSSVASKITVQQGRTGNDKDISVLPVHTSKPDFTSPINMYK
PVISQVPRISPPQWPGPPLQDMSYYTKTSGTIDVIGGGTATISRVEGRRRHNLEGNNIQV
IAENTDSEPTQPAKIPPFFPPGSLPPNIPPPPFLPPPPNVNSAPPLIPPPRLPITVPPPG
FPPPPSGPPPAIIPTLDSHSGGYDGRSVPPYPFPQGAYPPPMAGSVPPPWPPMMDQSKPW
DYYPRREEKREKERERPRERTHEREREREHSPSAMGYTSEEERYRYREYQERGYGTERHR
ERSSREKEDRHRERRHREKEEGRHKSSRSSSSRRRHDSEEGDSHRRHKHKKSKRSKEGKD
AGEEISADQENQEGME
NT seq
1671 nt
NT seq
+upstream
nt +downstream
nt
atgtctgcggaggaagcggacaaaacaggcaccactgatgctagcggtggagatgaggag
gaggaatggctgtatggagatgagcccgagggcacagaggaggacgaggaagccaaactg
aatgctgctgtcagtgcacctgctgatgcctcaacagaggatgctgctgaacacgctaca
ggcaatggagtcgcctctgaggcgacagtggagggtgaaggagtaaccgaggatgttgac
agtgacagcgacagtgatgatgacgacgacgacgtccgcgtcacaattggagacattaaa
actggagcaccacagtacacaacgtatggagctccacctgtcaatctcaacataaagacg
tcaggctccagaccttatggacaagcctccaagatgaaaggagtggatctggatggacct
ggaaacataaacggggttccagtgctggaggcagatatggagacctttgaagagaaaccc
tggaggaagccaggagcggatctgtcagactattttaactacggcttcaatgaagacaca
tggaagtcttactgtgaaaaacagaagaggctgcgcatgggcctggaggtctctactgtc
agctctgtggcgagcaagatcactgttcagcaaggcaggacaggcaatgacaaggacata
tccgttttacctgttcacacctccaaaccagactttacatctcctatcaacatgtacaag
cccgttatcagtcaggtccccaggatctctccccctcagtggcctggcccgcctcttcag
gacatgtcctattatacgaagacgagtggtacaatagatgtgatcggaggaggaacggcc
accatcagcagggttgaagggcgacgcagacacaaccttgaaggcaacaatatccaggtg
atcgctgaaaacacagactctgagccgactcagccggctaagattcccccgttcttccct
cctgggtcacttccaccgaacatacctccacctccattcctccctccaccacccaacgtc
aactctgcacccccactcatccccccacccaggttgcccattactgtccctccacctggt
tttcctcctccacccagtgggccccctcctgcaatcatccccactctggacagtcactct
ggaggttatgatgggcgctctgtccctccctacccgttccctcaaggtgcgtaccctcca
cccatggcaggaagtgtgcctcctccttggccccccatgatggaccaatccaagccctgg
gactactatccccgtcgagaagaaaagagagagaaggagagagaacggcccagagagagg
acacatgagcgggagagagagagggagcacagcccgtcagctatgggctacaccagcgag
gaggagaggtatcgttaccgtgagtaccaggagcgcggttatggaacagagcgacatcgt
gagcgctcaagccgagagaaagaggacagacacagagagagacggcaccgagagaaagag
gagggacgccacaagtcctctcgcagcagcagtagcaggaggaggcacgacagcgaggaa
ggcgacagccaccggaggcacaaacataagaagagcaagaggagcaaggagggcaaagat
gccggcgaggagatcagtgcagaccaagagaaccaggagggcatggagtag
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