Eleginops maclovinus (Patagonian blennie): 134865179
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Entry
134865179 CDS
T09869
Symbol
taf5
Name
(RefSeq) transcription initiation factor TFIID subunit 5
KO
K03130
transcription initiation factor TFIID subunit 5
Organism
emac
Eleginops maclovinus (Patagonian blennie)
Pathway
emac03022
Basal transcription factors
Brite
KEGG Orthology (KO) [BR:
emac00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
134865179 (taf5)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
emac03021
]
134865179 (taf5)
03036 Chromosome and associated proteins [BR:
emac03036
]
134865179 (taf5)
Transcription machinery [BR:
emac03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIID
134865179 (taf5)
Coactivators
SAGA/TFTC/STAGA complex
134865179 (taf5)
Chromosome and associated proteins [BR:
emac03036
]
Eukaryotic type
Histone modification proteins
HAT complexes
PCAF complex
134865179 (taf5)
STAGA complex
134865179 (taf5)
TFTC complex
134865179 (taf5)
SAGA complex
134865179 (taf5)
SLIK complex
134865179 (taf5)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Beta-prop_WDR5
WD40_Prp19
WD40
Beta-prop_IFT122_1st
Beta-prop_WDR3_1st
Beta-prop_THOC3
WD40_CDC20-Fz
Beta-prop_WDR3_2nd
TFIID_NTD2
WD40_WDHD1_1st
Beta-prop_CAF1B_HIR1
WD40_Gbeta
Beta-prop_WDR36-Utp21_2nd
Beta-prop_TEP1_2nd
EIF3I
Beta-prop_EML_2
Beta-prop_WDR90_POC16_2nd
WD40_MABP1-WDR62_2nd
WDR55
Beta-prop_EML
Beta-prop_WDR36-Utp21_1st
NBCH_WD40
Beta-prop_WDR75_1st
Beta-prop_VPS8
WD40_MABP1-WDR62_1st
ANAPC4_WD40
Beta-prop_Aladin
WDR90_beta-prop_4th
DSE1_N
Beta-prop_TEP1_C
Beta-prop_SCAP
PAC11
CFAP251_N
Beta-prop_RIG_2nd
Beta-prop_IFT140_1st
Beta-prop_Vps41
Beta-prop_WDR41
Beta-prop_EIPR1
Beta-prop_DCAF4
Beta-prop_HPS5
Beta-prop_SPT8
Beta-prop_DCAF12
WD40_RFWD3
Tricorn_2nd
Beta-prop_WDR19_1st
WD_LRWD1
Beta-prop_Nup120_160
ASA1
Beta-prop_NOL10_N
LisH_PAC1
CDK5RAP3
PROPPIN
LisH_TPL
Beta-prop_WDR11_2nd
Motif
Other DBs
NCBI-GeneID:
134865179
NCBI-ProteinID:
XP_063740702
LinkDB
All DBs
Position
5:complement(23038203..23044914)
Genome browser
AA seq
749 aa
AA seq
DB search
MAAVQGGQVEAVEEKDIKTEPSNDGGGNNNANDGRLLSTSPGSSSSTGSNKSAAGAPEDQ
QTLLAVLQFLRKNKLTESVEILRREAGLPEDSLDLKGGDTSGAGSGAAAGTVDLAGGDAS
ALLSRVTSSASAVAPAPTKAAGEDQPDVNVVLSAYSQQGDPPLYQVYYSGLKKFIESVLD
CHRAELSQVFYPLFVHMYLELVYNNHESEAKAFFEKFSGDQECYYEDDLRILSSLSKREH
MRGNETLLDFRTSKFVLRISRDSYQLLKRHLQERQNNQIWNIIQEHLYIDIFDGMPRSKS
QIDAMSGSLAGEGKREANKAKVYYGLLKEPEIELPLDDEDEEAENEEGKPKKKKPKKDSM
GSKSKKQDPNAPAQTRIPLPELKDSDKLDKIMYMKEATKRIRLGPDILPSICFYTFLNAY
QGLTAVDFTDDSSLIAGGFADSTVRVWSVTPKKLRKVKSAADLNLIDKESDDVLERIMDE
KTASELKVLYGHSGPVYGISFSPDRNYLLSSSEDGTVRLWSLQTFTCLVGYKGHNYPVWD
THFSPHGYYFISGGHDRVARLWATDHYQPLRIFSGHLADVTCTRFHPNSNYVATGSSDRT
IRLWDVLTGNCVRIFTGHKGPIHALAFSPNGKFLASGATDSRVLLWDIGHGLMIGELKGH
TDTVYSLRFSRDGEILASGSMDNTVRLWNATKAFDDLETDDFTAATGHVHLQDNSQELLL
GSYTSKSTPVIHLHFTRRNLLLAAGGYNP
NT seq
2250 nt
NT seq
+upstream
nt +downstream
nt
atggcggccgtacaaggtggtcaggtcgaggcggttgaagaaaaagacattaaaacagaa
ccatcaaacgatggcggtggaaataataatgcaaatgatggaaggctgctttctacgtcc
cccggctctagttcttcgactggaagtaataaatcagcggcaggagccccggaggaccag
cagacgctgctggcggtccttcagttcctccgaaagaacaaactgactgagtccgtcgaa
atattgcgtcgtgaagccggattaccggaggattcactggacctgaaggggggtgacacc
tctggggcaggttctggtgctgctgcgggcactgtggacctagcaggcggggatgcaagc
gctcttctcagccgagtcaccagctcagcctccgctgtagctccggcgccaactaaagct
gctggggaggatcagccggacgtcaatgtggttctgtcggcttacagccagcagggagac
ccccctctgtaccaggtttactacagcggcctgaagaagttcatagaatcggttttggac
tgtcaccgagcggagctgtcccaggtcttctacccgctgttcgtgcacatgtatctggaa
ctggtgtacaacaaccacgaaagtgaggccaaggcgttctttgaaaagttcagtggggat
caggagtgttactacgaagacgacctgcgcattttgtccagcctgtccaagagggagcac
atgagaggcaacgagacgctgctggacttccgcaccagcaagttcgtcctgcggatctcc
cgcgactcttatcagctgctgaagaggcatctgcaggagcgccagaacaaccagatctgg
aacatcatacaagagcacctctacatcgacatcttcgatggcatgccccgcagcaagagc
cagatcgatgccatgtctggcagcctggcaggagagggcaagcgggaggccaacaaggcg
aaggtttactatggactgctgaaggaaccagaaattgagctgccccttgatgacgaggat
gaggaggcagagaacgaggagggcaagcccaagaagaagaaacccaagaaggacagcatg
ggttccaagagcaagaagcaggatcctaatgcacctgcacagaccaggataccccttcca
gaactaaaggactccgacaagctggacaagatcatgtacatgaaggaggccaccaagagg
atccgcctgggaccagacatcctgccttccatctgcttctacactttcctcaacgcttac
cagggtctgactgctgttgacttcacagacgactccagcctgatcgcaggaggctttgct
gactccacagtacgggtgtggagcgtcacgccgaagaagctccgaaaggtcaagtccgca
gcagacttgaatctgatcgacaaagagtcggacgacgtgctggagaggatcatggatgag
aagacggccagtgagttgaaggtcctctacggacacagtggcccggtgtacggcatcagc
ttcagcccggacagaaactatttattgtcgagttctgaagatggtacggtccggctgtgg
agtctccaaaccttcacgtgtctggtgggctacaaaggccacaactacccagtgtgggac
acccacttttcccctcacggttactattttatctccgggggacatgacagagtagcccgc
ctgtgggcgacagatcactaccagcctctacggatcttctctggccacctagctgatgtc
acttgcacccgcttccaccctaactccaattatgtggccacagggtcatcagatcgaacc
atccggctgtgggacgtcctgacgggaaactgtgtccgcatcttcaccggtcacaagggt
cctatccatgcgctagctttctctcccaatgggaagttcctggcatcgggggccactgac
agcagagtgctcctgtgggacatcgggcatgggctgatgattggagagcttaaaggccac
acagatactgtgtactccctgcgcttcagcagagatggagagatccttgcctccggctcg
atggacaacacggttcgtctgtggaacgctacaaaagcatttgatgatttagagacagac
gatttcacagcggctacaggacatgtccatctacaagataactcccaggagcttctgctg
ggctcctacacgtctaaatccactcccgtcatacacctccacttcacccgcaggaacctg
cttctggccgccggggggtacaatccatga
DBGET
integrated database retrieval system
