Eleginops maclovinus (Patagonian blennie): 134865192
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Entry
134865192 CDS
T09869
Symbol
palb2
Name
(RefSeq) partner and localizer of BRCA2 isoform X1
KO
K10897
partner and localizer of BRCA2
Organism
emac
Eleginops maclovinus (Patagonian blennie)
Pathway
emac03440
Homologous recombination
emac03460
Fanconi anemia pathway
Brite
KEGG Orthology (KO) [BR:
emac00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
134865192 (palb2)
03460 Fanconi anemia pathway
134865192 (palb2)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
emac03400
]
134865192 (palb2)
DNA repair and recombination proteins [BR:
emac03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
BRCA complex
134865192 (palb2)
FA (Fanconi anemia) pathway
Downstream FA components
134865192 (palb2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PALB2_WD40
Motif
Other DBs
NCBI-GeneID:
134865192
NCBI-ProteinID:
XP_063740719
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All DBs
Position
5:complement(4213385..4222107)
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AA seq
1370 aa
AA seq
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MDKLSFQRTGSSEQNAELCGDIMPFDEQLRTTLHCDDKEKLRRKLELLQREYLKTAERLQ
RAEHFDAVRKHVRRRISQQNQRDQDVTSNPRVSPSPLILHATNGAATSEAQCEGLTGVFP
GPVDSDISRKSQVIRFLLPSEDPCTETLIPSHGAARGHRSSPTLRLRSRRSRLRWERRSA
EAGRSTDDNSEEGQEHSERMEIGGEGRDQSEGTQVVNESEEFISGTDSESPSLLLTHWNT
CGQNETGDIEGSQIQGQQEQRENETELRSEGEKKSKSTSLVLRYWDPADRELKGTQNGNR
KEGEEDVENCTEQRLCGNSSDKDNEQNSAEETEKEKRPENPAELKKDKSEMVGFGNDVKA
VSLLDSCTLVEGLIFPAEYYVRTTRRMSSSQSQPNMQAIILSQLSPGRRCSRRGRGRRSN
RHTQNSERSDQHTNISLSPPTTASVAPYLDSQPAEQNTQSSSELSDRFSGCQIDMGVCFS
PIVPTARPARGRRKKRGRGRGRPQTPRCSLSLDSNQVVLSQKTSEDPPPKSSPVNTSPPL
HGAAGPKPFISTVPDVPQPACTNSTDTPPPPGVIAAQSASGPLGKVFPIFHKSGEKSNRS
TPISRDAASWQSLLLPSSPLAQTSLLPLPSLSNGSLFNNLMNFDIIQDFHLPDEQFALLK
LHKLRQVSVASGVEPLSTPSYITRRSSRRFVGSDAERLLPLPLSLTPTITNSPLTTEAAS
HSDLQNVSMKYSRSVTEDPGRVIKETLGEQQTGNLQIESQTKSPRTGSVPVVQDVGVDQY
QERMILNADHTVEPQPHINLADIPAGRANNYDHELPIKESLILSEEQTVSHAVIHPLEEH
VSTNNQTDTIRTLSFDSSLQETPEEPPESRCADQLCNISKASPLQILHEKSPALDSREPP
ARPARRTPGDRPQPHSSQLLLSPALASAPFITQHPPPASALLSSPTLPSLGLTPHLLPSC
PSAPPLTLPPPHSPSTQALSPPALSQCRSQIRASSEPPRTDGQSQRIEAPPCRTVPGILS
QGGKGETAEEHMMRCTHTLKAPAGGCLVDACLLRGSSGGLCVAAAGKWALCLWSQSQASD
WSLTHTWAFNEPVIDVFPVPDAAGLMCVTLGQLEIREIRMLSCRSLSQLLLCDSVVQAVV
CVSGSRVVTSSHSASGSSLQVFTLSDSGSSFSTPAPQLLVSPGVCVGALAAVDGLSDALV
GSDESGHLFVWNLQTGQLLQRIILEEDLSHMACLRGYSYCGVLFVLLQHQLLSSLEEEVK
EREDESRNMALFSLVAINPLSGKSALATRLYPPKAWSGRLCEADVSSSSVVGLSQSGCVC
VWELGPRGAPRMVSAPESEGWQLARWGGEGTLVTGHHNGDVTLHYSQTSL
NT seq
4113 nt
NT seq
+upstream
nt +downstream
nt
atggacaagttgtcatttcaacgaactgggtcgagtgagcagaatgcagagctgtgtgga
gatatcatgccttttgatgagcagctaaggaccacactgcactgcgatgacaaggaaaag
cttcgtaggaagttggagctgctacaaagggagtacctcaagacagctgagagactacag
cgtgctgagcattttgacgcagtgcgcaaacatgtgaggaggagaatcagtcagcagaac
cagagagaccaagatgtgacatctaacccccgtgtcagcccatctccgttgatactgcac
gccaccaatggggcagccacaagtgaagctcagtgcgaggggctcactggagttttccca
ggtccggtggattctgacatctccaggaaaagccaggtgatcaggttcctgctcccttct
gaagacccttgcactgaaaccctgattcccagccatggcgcagctcgaggtcacagatcg
agccccactctgcgcctcaggtctcgacgcagccgcttgcggtgggagaggaggagcgct
gaggctggcaggagcacagacgacaacagtgaggaaggacaggagcacagtgaaaggatg
gagattggaggtgaagggagagaccaatcagagggaacacaggttgtgaatgaaagtgaa
gagttcatttctggtacagactccgagtctccgtctctgctgctgacacactggaacact
tgtgggcaaaatgaaacaggagatattgagggaagccaaatacaaggacaacaagagcaa
agggaaaatgagaccgagttaagatcagaaggggaaaaaaaatccaagtcaacttctttg
gtgcttaggtattgggaccctgcagacagggaactgaagggcactcaaaatggaaacaga
aaggagggagaagaagacgttgagaactgtacagagcagaggctgtgtggaaacagcagt
gataaagacaatgaacaaaattcagcagaggaaacagaaaaggaaaaacgtcctgaaaat
ccagctgaattaaaaaaagataaaagtgagatggttggatttggcaatgatgtgaaggcc
gtgagtctcctggactcctgtacgctcgtggaaggactcattttccccgcagagtattac
gtccggaccacaaggcgtatgtcatcatcccagagccagccgaacatgcaggctatcatt
ctctcccagctgagccctgggcggcgttgcagccgccggggccgcggtagaagatccaac
aggcacacacaaaattctgaacgttcagatcaacacaccaatataagtttatctccaccg
accactgcgtctgtagctccttacctggactcacagcccgctgagcagaacactcagagc
tccagcgagctttcagatcgattctcaggttgtcagatcgacatgggtgtttgtttttct
cctattgtccccactgctcgtccagcaagagggaggaggaagaagagaggtagaggaaga
gggaggcctcaaaccccacgatgctctctaagtttagactccaatcaggtagttctttca
caaaaaacctcagaggatcccccgccaaaaagctccccggtcaatacctccccgcctctt
catggagctgctggaccaaagcccttcatctctacagtgccggatgtcccacagcctgcg
tgcacaaacagcacagacacaccgcctcctcctggagttattgctgctcagtctgcctct
ggacctctggggaaggtctttcccatctttcacaagagcggtgaaaagagtaacagatcc
acaccgatcagtagagacgcagcgagctggcagtccctcctcctgccctcctctccactg
gcccaaacctctctgcttcctctcccctctctctctaacggctcgctgttcaacaacctg
atgaactttgacattatccaggacttccatctccctgatgagcagtttgctctccttaag
ctgcacaagctacgccaagtctccgtggcttcaggagtcgaacctttgtcaacgccgtct
tacatcacgcgcagaagcagccgccgttttgtcggcagtgacgcagagaggctccttcca
ctaccgctcagcctcacacccaccatcacaaactccccccttaccactgaagctgcttca
cattctgacctgcaaaatgtgtcgatgaaatacagccggtccgtaacggaagatcctgga
cgagttattaaggaaaccctcggagagcagcagactggaaaccttcagatagagagtcag
actaaatccccccgaaccggatctgtgccagtggttcaagatgttggcgtcgatcaatat
caagagaggatgattctgaatgctgaccacactgtcgaaccacagcctcacatcaactta
gcagacatccctgcaggaagggcaaataattatgaccatgaacttccgattaaagagtct
ctcattttatcagaggaacaaacagttagtcacgctgttatccatcctttggaggaacat
gtgtccacaaacaaccaaacagataccatcaggactctttcctttgatagctctctacag
gaaaccccagaggagcctcctgaaagccgctgtgctgatcagttatgtaatatcagcaaa
gcttcacccttgcagattctgcatgagaaatctcccgctttagactcaagggaaccccct
gcacggcctgcaagacgcacgcctggagacagaccgcagccccacagctctcagctcctg
ttgagccccgctctggcttcagcacccttcataacccagcacccgccccctgcctctgct
ctcctctccagccccactctgccatcactaggactcaccccccatctcctaccctcctgt
ccctctgccccacctctcaccctgcctccccctcacagcccgtccacccaggccctgtcc
cctccagctctctctcagtgtcgatcccagatccgggcttcatctgagccgccacgtaca
gacggccaatcccagaggattgaagctccgccctgcaggaccgttcccggcatcctgtcc
cagggtgggaagggggagacagcagaggaacacatgatgagatgcacacacacacttaag
gccccagcaggaggctgtctggtggatgcttgcctcctgcgtggatcctcggggggtttg
tgtgtcgcagcagcaggaaagtgggccttgtgtctctggagtcagtctcaagcttccgac
tggagcctcacacacacctgggccttcaatgagccagtgatcgatgtgtttcctgtcccg
gatgctgcagggctgatgtgtgtgactctgggtcagttagaaatccgagaaattaggatg
ctgtcgtgccgcagcctctcccagctgctgctctgtgacagcgttgttcaggcggttgtg
tgtgtgtccgggtccagagtggtgacctcctcccactcagcgtccggctccagcctgcag
gtgttcacgctctcagacagcggcagctctttcagcacaccggcccctcagcttctggtg
tctcctggtgtttgtgtcggggccctcgctgcggtggacggactttcagacgctctggtc
ggctctgatgaaagcggccacctcttcgtctggaacttacagacgggtcagctgctgcag
agaatcatcctggaagaagatttatcccacatggcctgtctcagaggatactcctactgt
ggagtgttgtttgtcctgctgcagcatcagctgctcagctctctggaggaagaagtcaaa
gagagggaagatgagagtaggaacatggctctgttctccttggtcgccattaaccctctg
agtgggaaatctgccctcgctactcgactgtatccgcccaaagcctggtccggcaggctg
tgtgaagccgacgtcagcagctccagcgtggtgggccttagtcagagcggctgtgtgtgt
gtgtgggagctcgggccccggggggcaccgaggatggtgtcggcccctgagagtgagggc
tggcagctggctcgatgggggggagagggaacgctggtgactggacatcacaacggagac
gtcaccctgcactacagtcagacatctctctga
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