Eleginops maclovinus (Patagonian blennie): 134865236
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Entry
134865236 CDS
T09869
Symbol
sorcs3a
Name
(RefSeq) VPS10 domain-containing receptor SorCS3
KO
K27083
VPS10 domain-containing receptor SorCS3
Organism
emac
Eleginops maclovinus (Patagonian blennie)
Brite
KEGG Orthology (KO) [BR:
emac00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
emac04131
]
134865236 (sorcs3a)
Membrane trafficking [BR:
emac04131
]
Endocytosis
Others
Others
134865236 (sorcs3a)
Endosome - Lysosome transport
134865236 (sorcs3a)
Endosome - Golgi transport
134865236 (sorcs3a)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sortilin-Vps10
Sortilin_C
PKD
PKD_4
Motif
Other DBs
NCBI-GeneID:
134865236
NCBI-ProteinID:
XP_063740784
LinkDB
All DBs
Position
5:18917205..19137720
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AA seq
1228 aa
AA seq
DB search
MGTGAGFCPGLHLSLGIWVMIAVHTLQNAQAEITCASCTVPVQLHQEELQLGMRTDPTEE
PDTLKNIRVEFRELDQNTGVDDEQETGVSVEDVPPQDVDGVSTTEPGANKESDSGSDKAG
EPEKGEDVALWRAKRSGPEFAEFSETGQAGVDVGTPENRGSLFDGHKQGKSDFRWNREEG
RGNNRQDEPKIISSTFSLTGDSAHNHAVVYWSGQNSSVILILTKLYDFHIGSVTESTLWR
STDYGSTYDRMNDKVGSKTVLSYLYVCPTNKRKIMVLTDPEFESSVLISSDEGASFQKYR
LTFYVLSLLFHHTEEDWALAYSHDQKLYSSVDFGRKWQLIHERVTPSRFYWSVSGLDKEP
DLVHMEAHTPDGNVQYVTCRAQTCTEANRNYPFPGYIDISSLVVQDDYIFIQVPTSGRAS
YYVSYKRDLFIQIKLPKYSLPKDLHIVSTDEKQVFAAVQEWNQNDTYNLYLSDTRGIYFT
LALENVKTTRGIGGNQMLDLYEVAGIKGMLIANKRQDNQVKTFMTYNKGRDWRLLQAPAT
DLDGNDIHCILPFCSLNLQLQTSENPYLSGTISTKSSAPGIIVATGNIGAELSYNNVGMF
ISSDAGNSWRQIFEEEHNVWFLDKGGALIAVKQPSVPTKHLWVSFDEGRHWTQHSFSAVP
LFVDGVLVEAGAENQIMTFFGHFSHRSEWQLIKIDYKSIFSRQCTEEDYQTWHLHNEGEP
CVMGQKQIYMKRRPGNYCMLGKDYSRILSAESCICRAHDFECDYGYERRGDGNCRPAFWF
NPSTVSRSCSQGQNYFNSTGYRKVVLNNCTKGVKEMYTARKQQCPNRPPKGLLVTTKDGK
LTTNLGSNVTFLVHLDEGDSIRTNIQLDFGDGTAVSYSNLSWTEEGIKHVYKSAGIFRVT
ALAENTLGYDTTTLFLHVTCPVEHIQLLAPFVVIKNKEVNITAVVLPSHSRTVTYFWWFG
NSTEPIITLDGSISHTFPNDGMHTITVQVAVANTILQDTKTIAVKEFFKSLLLSFSPNLD
EFNPDIPEWRQDVGRVIKKALLQVSDFPEEQLLVAVFPGVPTAAELFLLPHKNQSEGKKK
SEEVLEQVSDVIVTALNQNLVEFELKPGVRVIVYNTQLTLAPLVDSSPRHSSSAMLMLLS
VVFLGLAVFLIYKFKRKIPWINIYAEVNQEKEQEMIGSVGQGDSTPKITLSEFSASKELM
EKELDARIKRGVGNPCESTREIPNCTSV
NT seq
3687 nt
NT seq
+upstream
nt +downstream
nt
atggggactggggctggcttctgcccaggcttgcacttatctctgggtatctgggtgatg
atagccgtgcataccctccaaaatgcccaggcggagataacttgcgcatcttgcacggtg
ccagtgcaacttcaccaggaggaattacagctggggatgcgcactgacccgacagaggag
ccggacaccctaaaaaacattcgagtagagtttagggaactcgaccaaaatactggagtg
gacgacgagcaggagacaggcgtttctgtcgaggatgtcccccctcaagatgtggatgga
gttagtacaacagaaccaggggcaaataaagaaagtgacagcggcagtgataaggcaggg
gagccggagaagggcgaggatgtcgcgctctggagagcgaagagaagcggtcctgagttt
gccgagttcagtgagaccgggcaggccggcgtggatgtggggactccggagaaccggggc
tcgttgtttgacggacacaagcaagggaaatccgatttcagatggaacagggaggaaggg
agagggaataaccggcaggatgagcccaagatcatcagcagcactttctctctgacgggg
gactctgcgcacaaccacgctgtggtgtactggtcaggacaaaacagcagcgtgatcctg
attctaaccaagctgtacgactttcatattggcagcgtcactgagagcacactttggaga
tctactgactacggctccacatacgacagaatgaacgacaaagtgggatcaaagactgtc
ctgagttacctgtatgtctgtccaactaacaagagaaagattatggtgttgacagatcca
gagtttgaaagcagcgtactcatcagctctgacgagggagccagtttccagaagtatcgc
ctcaccttctacgtcctgagccttttattccaccacacagaagaagactgggccttggcc
tacagccacgaccaaaagttgtacagctcggtggactttggaagaaagtggcagctcatt
cacgaacgtgtcacaccgagccgattctactggtctgtttccggcctcgacaaagagcca
gatctggtccacatggaggctcatacgccggatggaaatgtgcagtatgtgacgtgcaga
gctcagacatgcacagaggctaacaggaactacccgttccctggatatatcgacatcagc
tcactggtggttcaggatgactacatattcatacaggttcctacatcaggacgtgcttca
tattatgtttcctacaagagagacctttttatacaaatcaaactccccaaatactcccta
cctaaggatttacacattgtcagcactgatgagaagcaggtatttgcggccgtgcaggag
tggaaccagaacgacacctataacctctacttgtccgacaccagagggatctacttcacc
ttggccttggaaaatgtcaagaccactaggggcatcggcgggaaccagatgcttgatctg
tacgaggtcgcagggattaaagggatgttgattgcaaataagaggcaagacaaccaggtg
aaaaccttcatgacctacaacaagggccgggactggaggctcctgcaggctcccgctact
gacctggatggaaacgatattcactgcatactgcctttctgttcactcaatctacaactg
caaacgtcagagaacccttacctgtcaggaacaatctccaccaagagttctgcaccgggg
atcatagttgccacgggaaatattggagcagagctgtcttacaacaacgtgggcatgttc
atatcgtctgatgctggcaatagctggagacagatttttgaagaggagcacaacgtgtgg
tttctggacaaaggaggggcccttattgcggtcaaacagccatctgtgcctactaaacac
ttgtgggtcagctttgacgaaggaaggcattggacccaacacagcttctccgcagtgcct
ctgttcgtggatggagtcttggtggaggctggggccgaaaaccaaataatgacgtttttt
ggacacttcagccaccgttctgaatggcagctcatcaaaatagactacaagtccatcttc
agcaggcaatgtacagaggaagactatcaaacctggcacctgcacaatgagggcgagcca
tgcgtgatgggacagaaacagatttacatgaagcgcaggcctgggaactactgcatgctg
ggaaaggactactcaagaatcctctcggcagagtcctgtatttgtcgtgctcatgatttt
gaatgtgattatggatatgagcgccgtggagacgggaactgccggcctgccttctggttt
aacccctccaccgtgtccagaagctgcagccagggccagaactacttcaatagcacaggg
taccgtaaagtggtgttgaacaactgcaccaaaggagttaaagagatgtacacggccaga
aagcagcagtgccccaacagaccacctaaaggactcctggtaaccaccaaagacggaaaa
ctcaccaccaacctgggaagcaacgtcaccttcctggttcacctggatgagggtgactct
attcgcaccaacatccagctggatttcggggatggcacagcagtgtcctactccaacctc
agctggactgaggaggggatcaaacacgtctacaagtcagctggaatattccgtgtcaca
gctctggcagagaacacgctgggttatgacaccacaaccctcttcctgcatgtcacatgt
ccagtggagcacatccagcttctcgctccctttgtggtcataaaaaacaaggaggtgaac
atcacagcagtggtcctgcccagccactcacgcactgttacttacttctggtggtttggt
aacagtactgagcccataataacattggacgggagcatctcacacacctttcccaacgac
ggaatgcacaccatcacagtacaggtggctgtagccaacaccatactgcaggataccaag
accatagcagtcaaagaattcttcaaatctctacttttatcattctcccctaatctggac
gagttcaacccagacatacccgagtggagacaggatgtggggagagtaattaagaaggct
ttgctccaagtgtcagacttcccagaggagcagctcctggtagccgtgttcccaggtgtc
ccaacagctgctgaactcttcctgttaccccacaagaaccaatcagagggcaagaaaaag
agtgaagaggtgctagagcaggtatccgatgtaattgtaacagcgctgaaccagaacttg
gtggagttcgagctgaagcccggcgtaagggtgattgtgtacaacacacagttaacactt
gcacccttggtggactccagccccagacacagcagctcggccatgctgatgctcctatcg
gtggtgttcctgggtttagcagtgttcctcatctacaaattcaagagaaaaataccttgg
atcaacatatacgctgaggtgaaccaggagaaggagcaggagatgattggctcggtaggc
cagggcgacagcacgcctaaaatcactctaagtgagttctccgcatccaaagaactcatg
gagaaagaactggatgccaggatcaaaaggggagttggaaatccgtgcgagagcacaagg
gagattccaaactgtacgagcgtgtaa
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