Eleginops maclovinus (Patagonian blennie): 134865249
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Entry
134865249 CDS
T09869
Name
(RefSeq) probable ATP-dependent RNA helicase DDX5
KO
K12823
ATP-dependent RNA helicase DDX5/DBP2 [EC:
5.6.2.7
]
Organism
emac
Eleginops maclovinus (Patagonian blennie)
Pathway
emac03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
emac00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
134865249
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
emac03041
]
134865249
03009 Ribosome biogenesis [BR:
emac03009
]
134865249
Enzymes [BR:
emac01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
134865249
Spliceosome [BR:
emac03041
]
Complex A
U1 snRNP components
U1 related factors
134865249
Complex B
134865249
Ribosome biogenesis [BR:
emac03009
]
Eukaryotic type
Pre-60S particles
Helicases
134865249
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
Helicase_C_2
Cas3-like_C_2
ERCC3_RAD25_C
BNIP2
Motif
Other DBs
NCBI-GeneID:
134865249
NCBI-ProteinID:
XP_063740799
LinkDB
All DBs
Position
5:9958178..9965581
Genome browser
AA seq
633 aa
AA seq
DB search
MPGFSDRDRGRDRGYGGGPPRFGGGSGGGSRGGPPPGKFGNPGERLRKKHWNLDELPKFQ
KNFYQEHSDSTRRPLQEIEQYRRSKEVTVKGRDCPKPIIKFHEAAFPNYVMEVIVKQNWT
DPTPIQSQGWPVALSGKDMVGIAQTGSGKTLAYLLPAIVHIQHQPFLEHGDGPICLVLAP
TRELAQQVQQVAAEYGRASRLKSTCIYGGAPKGPQIRDLERGVEICIATPGRLIDFLECG
KTNLRRCTYLVLDEADRMLDMGFEPQIRKIVEQIRPDRQTLMWSATWPKEVRQLAEDFLK
DYVQINIGALQLSANHNILQIVDVCNDMEKEDKLIRLLEEIMSEKENKTIIFVETKRRCD
ELTRRMRRDGWPAMGIHGDKSQQERDWVLNEFRYGKAPILIATDVASRGLDVEDVKFVIN
YDYPNSSEDYIHRIGRTARSQKTGTAYTFFTPNNMKQASDLIAVLREANQAINPKLIQMA
EDRGGRGRGGRGGYKDDRRDRYSGGGRSNFGGSSYRDREGDRGFGGGPKSAFGGNKAQNG
GSYGGSGNSSGSYGNNNYNNSNGQGNFGAPTNQVGAFGNQSFQGPPQFGGMQRAAQNGMN
HPPFPFNSQPPPQAQQAPPPPMVPYPMPPPFPQ
NT seq
1902 nt
NT seq
+upstream
nt +downstream
nt
atgcctggattttcagacagagaccgtggcagagatagagggtatggtggaggaccccct
cgttttggtggcggtagcggtggaggcagtaggggcggacctcctccaggaaaatttggc
aatcctggtgagaggctgcggaagaagcactggaaccttgatgagcttccaaagtttcaa
aagaacttttaccaggaacattcagattcaactcgcagaccacttcaagaaattgaacag
tatcgaagaagcaaagaagttactgtcaaaggcagggattgccccaaaccaattataaaa
ttccatgaagctgcatttccaaattacgtcatggaagtaattgtcaaacagaactggact
gatccaactccaattcagtctcaggggtggccagttgcgctgagtggcaaagacatggtt
ggaatcgctcaaacagggtctgggaaaacccttgcttatcttcttcctgcaattgtgcac
attcaacatcaaccattcttggagcatggagatggacctatatgcttggtgctggcaccg
acccgtgagctagctcagcaggtgcaacaggtggctgctgaatacggcagggcctcccgt
ctcaagagcacctgtatctacggtggtgcgcctaaagggccacaaatcagggaccttgag
aggggtgtagagatttgcatcgctaccccaggtcgtctcattgacttcctggagtgtggt
aagactaatttgcgtcgttgtacctatctggtgctggatgaagcagaccgcatgctggac
atgggatttgaacctcagatccgcaagatagtggaacaaattcggccagaccgtcagacc
ctgatgtggagcgccacatggcctaaggaagttcgccagctggctgaggacttcctgaag
gactacgttcagatcaacattggcgcactgcagctcagtgccaaccacaacatcctgcag
atagttgatgtttgcaatgacatggagaaggaggataaactgatccgtttgctggaggag
ataatgagtgaaaaggagaacaagaccattatatttgtggagacaaaaaggcgttgtgac
gagctcaccaggaggatgagaagagatgggtggccagcaatgggaattcatggagataag
agccagcaggaaagagactgggttcttaatgagttcagatatggcaaagctccaatcctc
atcgctaccgatgtggcctcccgtggcttggatgtggaggatgtgaaatttgtcatcaat
tatgactaccctaactcctccgaggattatatccatcgcattggacgcacagcccggagt
caaaaaacgggcacagcctacaccttcttcacccccaacaacatgaaacaagccagtgac
ctgatcgctgtgctgcgcgaggccaaccaggccattaaccccaagctgatccagatggca
gaggacagaggaggtcgaggaagggggggaagaggtggctacaaggatgaccgtcgggat
aggtattctgggggtgggcggagcaactttggaggtagtagctacagggacagggaaggg
gatagagggtttggtggtgggccgaagagtgcctttggtggcaataaggcgcagaatggt
ggcagctatggaggcagtggtaattctagtggtagttatggaaacaacaactataacaac
agtaatggacagggtaattttggtgctccaacaaaccaggtgggtgcgtttggtaaccaa
agcttccagggcccccctcagtttgggggtatgcagagggccgctcagaatggcatgaac
catccaccattcccattcaactctcagccaccaccacaggcccaacaggctccaccacca
ccaatggtgccctaccccatgccaccacccttcccacagtag
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