Eleginops maclovinus (Patagonian blennie): 134865539
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Entry
134865539 CDS
T09869
Symbol
prpf38b
Name
(RefSeq) pre-mRNA-splicing factor 38B
KO
K12850
pre-mRNA-splicing factor 38B
Organism
emac
Eleginops maclovinus (Patagonian blennie)
Pathway
emac03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
emac00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
134865539 (prpf38b)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
emac03041
]
134865539 (prpf38b)
Spliceosome [BR:
emac03041
]
Complex B
U4/U6.U5 tri-snRNP components
U4/U6.U5 tri-snRNP related factors
134865539 (prpf38b)
Complex C
U4/U6.U5 tri-SnRNP related factors
134865539 (prpf38b)
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PRP38
Motif
Other DBs
NCBI-GeneID:
134865539
NCBI-ProteinID:
XP_063741189
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Position
6:12620257..12625829
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AA seq
457 aa
AA seq
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MANVGNQLPTQAVSKPASGKHGNTLPLWGNEKTMNLNPMILTNVLSSPYFKVQLYELKTY
HEVVDEIYFKVNHAEPWEKGSRKTAGQTGMCGGVRGVGTGGIVSTAYCLLYKLFTLKLTR
KQLMGLITHSDSPYIRALGFMYIRYTQPPADLVDWYDGFLDDEEELDVKAGGGCVMTIGE
MLRSFLTKLEWFSTLFPRIPVPVQKSIDVKMKARPRKVAVKEVQEEEPEVAEPGKEGEQR
SSRTPKQTPSPKKSPKRSRSRSHHREKERHGPSFDRELERERDRQKKERGGGEREKGERG
DRERRRSRSADRNQDRRERRRSGSRDRRNERRDKERDGGDDRNKRKEREHHKERGVERER
SKDKKNRGETDDRRHKEDRHREERKAKRQSRSRSRERKHKSGGEEKSRKRERSHDRERDG
EQRTHKLGGSKDRSHHQRESSNDHSKHSERRRSQSTE
NT seq
1374 nt
NT seq
+upstream
nt +downstream
nt
atggctaacgtcggaaaccagctaccaacacaggccgttagcaagcctgcatcaggaaaa
catgggaatacattgcccctgtggggcaacgaaaagactatgaacctcaacccaatgatt
ctcacaaatgtgctgtcttcgccgtatttcaaagttcagctttacgaactaaagacgtac
catgaagttgtggacgaaatatacttcaaggtgaatcatgctgagccttgggaaaaggga
agcagaaagactgcaggccagactggaatgtgcggaggggtgcgtggagttgggactggt
ggtattgtctctactgcttactgtcttctatacaaactgtttactctcaagctgactcgc
aaacagctgatgggtctgatcactcactcagactctccctacatcagagcacttggcttc
atgtacataagatacactcagcctccagcagatttggtagattggtacgacggcttcctg
gatgatgaggaggagcttgacgtgaaggcagggggtggctgtgtgatgaccatcggagag
atgctgcgctccttcttgaccaaactggagtggttctccactctgttcccccgtatcccg
gtgcctgtgcagaaatctattgacgtgaagatgaaggccagacctcgtaaggttgcagtg
aaagaggtgcaggaggaggaacccgaggtggcggagccagggaaggagggagaacaacgc
agctccaggacaccaaaacagacaccaagtccaaaaaagtccccaaaacggtcaaggagc
aggagccaccaccgcgagaaagaaagacacggccccagctttgacagagagctagagagg
gagcgggaccgccagaagaaagagagggggggtggggagagggagaaaggggagcgaggg
gacagggaaagacgacggtcccgcagcgcagacaggaaccaagaccggagagaacgtaga
aggagtggcagcagagacagaagaaacgaacgcagagacaaagaaagagacggcggggac
gacaggaacaagaggaaagagagggaacaccataaagagagaggcgtagagagggagagg
tccaaggataaaaaaaacaggggggagacggatgacagaaggcataaagaagacaggcac
agagaagagaggaaggccaaaaggcagagccgaagtcgtagtagggagaggaagcacaag
agcggaggggaggagaagagcaggaagagagagcgcagccacgacagggagagggacgga
gaacagcgcactcacaaacttggtggtagcaaagacaggagccaccatcagcgagagtcc
agtaatgaccatagcaaacatagtgaacgcagaaggagtcagagcactgagtaa
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