Eleginops maclovinus (Patagonian blennie): 134866008
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Entry
134866008 CDS
T09869
Symbol
lamc1
Name
(RefSeq) LOW QUALITY PROTEIN: laminin subunit gamma-1
KO
K05635
laminin, gamma 1
Organism
emac
Eleginops maclovinus (Patagonian blennie)
Pathway
emac04510
Focal adhesion
emac04512
ECM-receptor interaction
Brite
KEGG Orthology (KO) [BR:
emac00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
134866008 (lamc1)
09140 Cellular Processes
09144 Cellular community - eukaryotes
04510 Focal adhesion
134866008 (lamc1)
BRITE hierarchy
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Paralog
Gene cluster
GFIT
Motif
Pfam:
Laminin_N
EGF_laminin
Laminin_B
EGF_LMN_ATRN
EGF_Teneurin
Crescentin
Alanine_zipper
Death
Motif
Other DBs
NCBI-GeneID:
134866008
NCBI-ProteinID:
XP_063741962
LinkDB
All DBs
Position
6:complement(25412878..25466610)
Genome browser
AA seq
1595 aa
AA seq
DB search
MRVLIRALVAWSWVLLCARAAMDECLDEQLRAQRCMPEFVNAAFNVTVVSTNTCGSPPEE
YCVQTGATGVTKSCHICSAGDSRNHHSAGYLTDYNNQQDTTWWQSQTMLAGIQYPNSINL
TLHLGKSFDITYVRLKFHTSRPESFAIYKRTREGGPWIPYQYYSGSCEKTYQKPGRGFIR
TGEDEQQALCTDDFSDISPLTGGNVAFSTLEGRPSAYNFDNSPVLQDWVTATDIRVTLNR
LNTFGDEVFNDPKVLKSYYYAISDFAVGGRCKCNGHASECVKNPVGRLVCNCKHNTEGDD
CNTCQAFYNDRPWRRATADNSNDCQACDCNGKSSECYFDAELYRATGHGGHCRGCADNTD
GPNCERCLDYYHRDPSGSRCLACSCNTVGSVSPQCDNRGVCACKPGVTGEKCDRCQPGFH
SLTQAGCRPCSCSPSGSTQECDVNTGQCRCKDNVEGFSCDRCKLGFFNLDPHNPQGCTPC
FCFQHSSVCDSADGFTIHTVSSAFSSGDEQWSGQQRDGGSVSVLWSSSGQEVSLISDDYF
PMYFVAPDKFLGNQMLSYGQNLSLSFRVERRDTRLSAEDVVLEGAGLRVAVPLIAQGNAY
PNENMQTYVFRLHDSTDYPWRPTISHNDFQKLLHNLTSIKIRGTYSERSAGYLDDVSLVT
ARRGGPGEPAHWVERCTCPQGYQGQHCEQCTLGYRRVQPELGAFSSCEPCNCNGHSEACS
PSTGACDCRDNTAGLSCERCKDGFYGDATSGSSSDCQPCPCPASATCAVVPKTREVVCTN
CPTGTTGKRCELCDDGFFGDPLGQSGPVRACRACKCSDNIDPNAVGNCNRETGECLKCIY
NTDGFFCDRCKDGFYGNALAAAVGDKCKPCSCSPLGTLGSQVSCSQVTGQCECLSNVAER
DCSACQPGFFNLQSGDGCERCNCNPIGSTNGQCDITSGQCECQPGVTGRHCERCEENSFG
FSASGCKPCDCDPEGSASAQCQDDGRCECRPGFVGSRCDMCEENYFYNRSAPGCQQCPSC
YSLVRDKVNQQRQKLHDLQTLIDNLGSGQETVSDQAFEDRLKEAEKSIEELLQEAQSSKD
VDRGLLERLNSINSSLSTQWNRLQNIRSTVDDTGLQADRARSRVRDAESLIDRARHELDK
AKDAVAKVDIKAPSGSGDPNNMTLLAEEARTLADKHKMDADQIEKIAKDANDTSTRAHEL
LLKTLEGESQTSREIDELNKKYTEAKELAKSLEKQANKVQAEAEDAGNRALKIFANLTST
PPFDTKTLEDEASKIKKEASDLDKLIDKTEKEYNDLRDDLKGKEQEVRKLLEKGRSEQQT
ADQLLARADAAKALAEEAAEKGKATFREAESILEDLRDFDRRVNDNKTAAEDALKKIPAI
NATIMAANQKTRQAEAALGNANADAREAKAKAEEAEKIAGNVQKGSAKTKEDAEKALEET
TRLDGEVSAMMEQLDDAEQELNRKKAEAAADMMMAGMASDNAKEAEDNARKAKSAVKTVL
STITALLDQLGNIDKVDLSKLNQIDESLKRAKGSMGASDLDRKLSELTEVARSQEDLIND
YDRQIREIHADINNLNDIKNTLPEGCFNTPSLERP
NT seq
4788 nt
NT seq
+upstream
nt +downstream
nt
atgcgggttttgatccgggctctggtggcctggagctgggtgttgctgtgcgctcgcgcc
gcgatggatgagtgtttggacgagcagctccgcgcgcagcgatgcatgcccgagttcgtg
aacgcagcctttaacgtgacggtggtgtcgaccaacacctgcggctctccgcccgaggag
tactgcgtgcagaccggcgccaccggggtcaccaagtcctgccacatctgctccgccgga
gactcgaggaaccaccacagtgccgggtacctgacggactacaacaaccagcaggacacc
acctggtggcagagccagaccatgctggcggggattcagtaccccaactccatcaacctc
accctgcacctcggcaaatccttcgacatcacctacgttcggctgaagttccacaccagc
cgccccgagagtttcgccatctacaagcggacccgtgagggcgggccctggattccctac
cagtactacagcggctcctgtgagaagacctaccagaagccaggtcgaggattcatccgc
accggggaggacgagcagcaggcgctgtgcaccgacgacttcagcgacatctctccgctc
accggggggaacgtggccttctccacactggagggccgacccagcgcctacaacttcgac
aacagcccggtgctgcaggactgggtgacggccaccgacatcagggtgactctgaaccga
ctcaacacgttcggagatgaagttttcaacgaccccaaagtcctcaagtcatactactac
gccatctccgacttcgctgtgggcggccggtgtaagtgtaacggccatgccagtgagtgt
gtgaagaaccccgttgggcggctggtgtgtaactgcaaacacaacacggagggagacgac
tgcaacacctgccaggcgttctacaacgaccgtccatggaggagggcgacggccgacaac
agcaacgactgccaggcctgcgactgtaacgggaagagttctgagtgttactttgacgcc
gagctgtaccgggccaccgggcacggcggacactgcagaggctgcgccgacaacacggac
ggacccaactgcgagcgctgcctcgactactaccaccgggacccgagcggcagccgctgc
ctggcctgcagctgcaacaccgtcggctcggtgtctcctcagtgtgacaacagaggagtg
tgtgcgtgtaaacccggagtgaccggagagaagtgtgaccgctgccagcctggcttccac
agcctgacgcaggccggctgcaggccgtgctcctgctctccctccggcagcactcaggag
tgtgatgtgaacacgggacagtgccgctgcaaagacaacgtggagggcttcagctgcgac
aggtgtaagctgggcttctttaacctggacccccacaaccctcagggctgcaccccctgc
ttctgcttccagcactcctcggtgtgcgacagcgccgacggcttcacgatacacaccgtc
agctccgccttctcctccggtgacgagcagtggagcggccagcagcgagatggaggcagc
gtctcggtgctttggtcgtccagtggacaggaagtgtccctcatctccgacgactacttc
cccatgtacttcgtagccccagataagtttttggggaaccagatgctgagctacggtcag
aatctgtctctgagtttccgggtggagcggcgggacacccgtctgtcagcggaggacgtg
gtgctggagggggcggggcttagagttgctgtgccactcatcgcccagggcaacgcctac
cccaacgagaacatgcagacatacgtgttcaggctccatgacagcactgattacccctgg
aggccgaccatcagccacaacgacttccagaaacttctccacaacctgacctccatcaag
atcagagggacctacagcgagagaagcgctggttacctggacgacgtctccttggtgaca
gcgaggcgggggggtcctggtgagcccgcccactgggtggagcgctgcacctgtcctcag
ggttaccaggggcaacactgtgagcagtgcactctgggataccgtcgagtccagcccgag
cttggagccttcagctcctgcgagccctgcaactgcaacgggcacagcgaggcctgctcc
cccagcaccggagcgtgcgactgtcgggacaacacggccggcctcagctgtgaacgctgt
aaggacggtttctacggcgacgccaccagcggctcgtcctccgattgtcagccgtgtccc
tgtcccgcctccgccacctgcgccgtggtgcccaaaaccagagaggtggtgtgtaccaac
tgccctacaggaaccacaggtaagcgctgcgagctgtgtgacgacgggttcttcggcgac
ccgctgggtcagagcggcccggtgcgagcctgccgagcctgcaagtgcagcgacaacatc
gacccaaacgccgtggggaactgcaaccgcgagacgggcgagtgtctgaagtgcatctac
aacacggacgggttcttctgcgaccgctgcaaggacgggttctacgggaacgccctcgcc
gccgccgtcggagacaagtgcaaaccctgctcctgctcgccgctcggcactctgggtagt
caggtgagctgctctcaggtgaccgggcagtgcgagtgtctctctaacgtggcggagaga
gactgcagcgcctgccagcccggcttcttcaacctgcagagcggagacggctgcgagagg
tgtaactgtaatccgattggctctaccaacggtcagtgtgacatcacgtcgggtcagtgc
gagtgtcagcccggcgtcaccggacgccactgcgagcgctgcgaggagaactccttcggg
ttcagcgcctcgggctgcaaaccctgcgactgcgacccggagggctcggcctcggctcag
tgtcaggacgacgggcgctgcgagtgccggccgggcttcgtgggctctcgctgcgacatg
tgtgaggagaactacttctacaaccgctcagcgcccggctgccagcagtgcccgtcctgc
tacagcctggtccgggacaaggtgaaccagcagcggcagaagctgcatgacctgcagact
ctgatcgataatctgggctcgggtcaggagacggtcagcgaccaggccttcgaggaccgt
ctgaaggaggcggagaagagcatcgaggagctgctgcaggaggcgcagagcagcaaggac
gtggaccgcgggctgctggagcgtctgaacagcatcaacagttcgctgagcacgcagtgg
aaccgtctgcagaacatccgcagcacggtggacgacaccgggctgcaggccgaccgagct
cgatcccgagtccgagacgccgagagcctgatcgaccgagcgcgccacgagctcgacaag
gccaaggacgccgtggccaaagtggatatcaaagccccgagtggcagcggagacccgaac
aacatgacgctgctcgctgaggaagcacgcacgctggccgacaaacacaagatggacgcc
gatcagatcgagaagatcgctaaagacgccaacgacacgtcgactcgagctcacgagctg
ctgctgaagactctggagggggagagccagacgagccgcgagatcgacgagctcaacaag
aagtacaccgaggcgaaggagctggcgaagagtctggagaagcaggccaacaaggtgcag
gcggaagccgaggacgccgggaaccgggcgctgaagatcttcgccaacctcaccagcacc
ccgccgttcgacaccaaaactctggaggatgaggccagtaaaataaagaaggaggcctca
gacctcgataagctcatcgacaagacggagaaggagtacaacgacctgcgagacgacctg
aagggcaaagagcaggaagttcgcaaactgctggaaaaaggacgcagcgagcagcagact
gcagatcagctgctggcccgagcggacgctgctaaagctctggccgaggaggcggcggag
aaagggaaggcgactttcagagaggccgagagcatcctggaggacctgcgagactttgac
cgcagagtgaacgacaacaagacggcggcggaggacgctctgaagaaaatccctgccatc
aacgccaccatcatggccgccaaccagaagacacggcaggcggaggcggcgctcggaaac
gccaacgccgacgcccgggaggccaaggccaaggcggaggaggcggagaagatcgcagga
aacgtgcagaagggctcggcgaagacgaaggaggatgcagagaaggctctggaagaaacc
acccgattggacggggaggtgtcggccatgatggagcagctggacgatgccgagcaggag
ctgaaccgcaagaaggccgaggcggcggcagacatgatgatggccggcatggcgtctgat
aacgcgaaggaggctgaggacaacgcccgcaaagccaagagcgccgtgaagacggtgctg
agcaccatcaccgccctgctggaccagctgggaaacatcgataaggtggacctgagcaag
ctgaaccagatcgacgagtccctgaagcgggcaaagggctcgatgggggccagcgatctg
gaccggaagctgtcggagctgaccgaggtggcacgctctcaggaggatctcatcaacgat
tacgaccggcagatccgcgagatccacgccgacatcaacaacctgaacgacatcaagaac
acgttaccagagggctgcttcaacacgccgtccctggagcggccctaa
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