Eleginops maclovinus (Patagonian blennie): 134866017
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Entry
134866017 CDS
T09869
Name
(RefSeq) collagen alpha-4(IV) chain-like
KO
K06237
collagen type IV alpha
Organism
emac
Eleginops maclovinus (Patagonian blennie)
Pathway
emac04382
Cornified envelope formation
emac04510
Focal adhesion
emac04512
ECM-receptor interaction
emac04518
Integrin signaling
emac04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
emac00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
134866017
04518 Integrin signaling
134866017
09140 Cellular Processes
09144 Cellular community - eukaryotes
04510 Focal adhesion
134866017
09142 Cell motility
04820 Cytoskeleton in muscle cells
134866017
09150 Organismal Systems
09158 Development and regeneration
04382 Cornified envelope formation
134866017
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
emac04147
]
134866017
00536 Glycosaminoglycan binding proteins [BR:
emac00536
]
134866017
Exosome [BR:
emac04147
]
Exosomal proteins
Exosomal proteins of other cancer cells
134866017
Glycosaminoglycan binding proteins [BR:
emac00536
]
Heparan sulfate / Heparin
Extracellular matrix molecules
134866017
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Collagen
C4
Motif
Other DBs
NCBI-GeneID:
134866017
NCBI-ProteinID:
XP_063741978
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All DBs
Position
6:complement(13641474..13653243)
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AA seq
1107 aa
AA seq
DB search
MVPLALQVTLGAGFVGLPGPKGYPGAAGLKGFPGPIGPPGPGFSGPKGLQGPKGYQGSPG
PSGIPGRTGPPGENGLSCHEYEIGPPGPEGKPGSPGIPGESGRDGPPGTLGHPGPKGMKG
DDSSTGGIGQIGLPGLDGDPGDPGARGISQVGPPGPPGFQGDPGRKGEPGDVFSARPFDT
GPPGRPGLLGKKGLRGIPGNPGSALVHHRCLLITGEQGLSRPPGWKGEPGSSGDPGATGP
RGPPCTAFELKGLPGPPGPTGNPGHRGIPGLPGQKGLKGDIGPPGHGLRGPKGFPGPPGL
SVVGPRGPNGISGEPGADGLPGKKGESGYPGKPGAIRLPGHPGPAGPRGKQGETGFTGLP
GDPGYPGQPGNKGVRGLPGLPGPSGIVNVKKGQLGISGREGQQGQQGPEGSKGLRGPPGD
SGPDGWPGSLGYKGSTGALGRAGRPGSPGFPGIKGFTGPRGLPGQSGDPGDQGPLGPSGI
PGLPGFPGVKGNPGQSYGDPGPPGSKGMPGEDGQTVPRGIPGYPGDPGPRGRSGQPGQPG
IDGEPGRQGETGFPGPRGSSGLPGIPGLPGDHGGLGPLGPPGPYGPPGTPGPPGLDGLDG
LRGPNGIKGESGIGFSGPPGPDGLPGVKGVRGQQGSPEVSFPGPKGQRGPSGFKGLPGSP
GASGNPGIDCFKPPPGSYGDIGYEGPPGSPGPPGEPGLPGSSIFSKGDPGSTGLPGLPGR
KGDGGPPGPSGSQGYQGVTGPKGERGPKGPKGPPGPNGQTGVPGPWGRKGSTGPTGAAGA
KGAPGDSIRGNRGEAPPGLPGPRGLPGSVGYRGDVGPPGTPGRKGKRGPVGYVGLPGKPG
PAGRDGPVGDPGDVGQQGFTGPQGIPGPTGDPGRPGHRGALRSGHLLVIHSQSVQVPRCP
EGSIQLWVGYSLVYLEGQEKAHTQDLGQAGSCLRVFSTMPFSYCNKAACHYSSRNDKSYW
LSTTAPIPMMPLFGQEISSHISRCAVCETVAPAVAFHSQDHNVPSCPRGWRSLWTGYSFL
LHTGAGDEGGGQSLSSSGSCLKDFRTPPFIECQGARGSCHYFANLYSFWLTTVSPTEQFI
TQRPGTIKAADQQRHKASQCHVCLRAQ
NT seq
3324 nt
NT seq
+upstream
nt +downstream
nt
atggtccccctggccctgcaggtgaccctgggtgctggatttgtagggttacctggtccc
aaagggtaccctggtgctgctggactcaaagggtttccaggtcctattggccctcccggt
cctggtttttcaggccctaaggggctccaaggacctaaagggtatcagggaagtcctggc
ccctcaggaattcctggacgaacaggccctccaggtgaaaatgggttaagctgtcatgaa
tatgaaattggaccaccaggtcccgaggggaagccaggatcaccgggtattccaggtgag
tcaggaagagatggtcctccaggaactctgggacacccaggcccgaaaggcatgaaagga
gatgacagtagtactggaggaattggacagataggacttccaggtttagatggggatcca
ggtgaccctggtgccaggggaattagccaggttggtcctccaggccctccagggtttcaa
ggagatccaggcaggaagggtgagccaggcgatgttttctctgccaggccatttgatact
ggcccacctggccgccctgggcttttggggaagaaaggactacgaggcattcctggaaac
cctggatctgcattggttcaccatcgatgcctcttaattacaggtgaacaaggcctgtct
agaccacctggttggaaaggagagccaggatccagtggtgaccctggggccactggtccc
cgaggcccaccttgcactgcatttgaactgaaaggacttccagggcctccaggccctaca
ggaaatcctggacacaggggaataccaggccttcctggtcagaagggtttgaagggagat
ataggtccacctggtcatggacttaggggtccaaaaggtttccctggccctcctggtttg
tcagtggttggaccaagaggccctaatggcatctcaggagaacctggggctgacggcttg
ccaggaaagaaaggtgaaagtgggtacccaggcaaacctggggccatacgtttaccaggc
catcctggacctgcagggcccaggggtaaacaaggagagacaggttttactggtctccca
ggggaccctggatacccaggacagcctggtaataaaggtgtacgtggtttgccaggatta
ccaggaccttcagggattgtgaatgtaaaaaagggccaactaggaatttctggaagggaa
gggcaacaaggacaacaaggacctgaaggctcaaagggcctgaggggaccaccaggtgat
tcaggaccagatgggtggcctggttctctagggtataaaggcagcactggtgctctgggc
agagcaggaagaccaggttctccagggttccctggaatcaaaggtttcactggtccaagg
ggattgcctggacaaagtggagatccgggagatcaagggcctttgggaccatcaggtatt
ccagggttaccgggatttccaggtgtcaaaggtaacccaggacaatcttatggagaccct
ggtccacctggatccaaaggaatgccaggagaggatggacagactgtgcccagagggatt
ccaggttatccaggagacccaggaccccggggaaggtccggacaaccaggacaaccaggc
attgatggggagccaggaagacaaggagaaacaggcttccctggtcctcgtggctcttca
ggtcttccaggtattccaggtctgccaggtgatcatggaggtctgggaccacttggccca
cctggcccatatgggcctccagggacccctggaccaccaggtcttgatggactagatggg
cttagaggtccaaatgggataaaaggcgagagtggcataggtttctctggccctcctgga
ccagatggtcttcctggagtcaaaggggtcaggggacagcaagggtctccagaagtcagt
tttcctgggcctaaaggccagagaggcccatctggcttcaaaggtcttccaggctcccca
ggggcatctgggaaccctgggatagattgcttcaagcctccgccaggatcctacggggac
ataggatatgaaggacctccaggatccccaggccctcctggggagccgggccttccaggc
agcagcattttctccaaaggagacccaggttcaaccggcctacctgggttaccaggccgc
aagggcgacggtggccccccagggccttctgggtcacagggctaccaaggggttacaggg
ccaaaaggtgagagaggtcctaaaggtcctaaaggtcctccaggccccaatggtcagact
ggagtccctgggccttggggcaggaagggttcaactggcccaactggggcagcaggtgct
aaaggtgcccctggtgattccatcagaggcaaccgaggtgaggctccacctggactccca
ggaccacgtggattaccaggatctgtgggatatcgtggcgatgtaggtcctcctgggact
ccaggacgtaaaggcaagagaggtcctgtagggtatgtaggcctgcctggcaaaccaggt
cctgctggtcgtgatggtcctgttggagacccaggagatgttggtcagcaaggatttact
gggcctcagggtatcccaggtccaaccggtgatccaggtaggccaggccatagaggggca
ctgaggtcaggccaccttttggtgatccacagtcagtcagttcaggtgccacggtgccct
gaaggcagcatccagctttgggtgggctacagtctggtttacttggaagggcaagagaag
gctcacactcaagacctgggccaggctggatcctgtctccgtgttttctccaccatgcct
ttctcgtactgcaacaaagctgcctgccactactccagtcgcaacgacaaatcctattgg
ctctccaccaccgctcccatacccatgatgcccctcttcggccaggagattagctcccac
atcagtcgttgtgcggtgtgtgagactgttgcgcctgcagtggcttttcacagccaggat
cacaacgtcccctcatgtccacgtggctggaggagtctgtggacgggatactctttcctc
ctgcacacaggggccggtgatgagggtggtggccagtctctatcttcctctggtagctgc
cttaaggatttccgaactccccccttcatagagtgccagggtgcgcgtgggtcctgccac
tactttgccaacctgtacagtttttggctgactactgttagtccaacagaacagtttatc
acccagaggcctggcaccatcaaggcagcggaccaacagcgacacaaggccagtcagtgt
cacgtctgcctcagagcacaataa
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