Eleginops maclovinus (Patagonian blennie): 134866018
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Entry
134866018 CDS
T09869
Name
(RefSeq) collagen alpha-3(IV) chain-like
KO
K06237
collagen type IV alpha
Organism
emac
Eleginops maclovinus (Patagonian blennie)
Pathway
emac04382
Cornified envelope formation
emac04510
Focal adhesion
emac04512
ECM-receptor interaction
emac04518
Integrin signaling
emac04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
emac00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
134866018
04518 Integrin signaling
134866018
09140 Cellular Processes
09144 Cellular community - eukaryotes
04510 Focal adhesion
134866018
09142 Cell motility
04820 Cytoskeleton in muscle cells
134866018
09150 Organismal Systems
09158 Development and regeneration
04382 Cornified envelope formation
134866018
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
emac04147
]
134866018
00536 Glycosaminoglycan binding proteins [BR:
emac00536
]
134866018
Exosome [BR:
emac04147
]
Exosomal proteins
Exosomal proteins of other cancer cells
134866018
Glycosaminoglycan binding proteins [BR:
emac00536
]
Heparan sulfate / Heparin
Extracellular matrix molecules
134866018
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Collagen
C4
Motif
Other DBs
NCBI-GeneID:
134866018
NCBI-ProteinID:
XP_063741979
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All DBs
Position
6:13665309..13691163
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AA seq
1657 aa
AA seq
DB search
MAVLLMGTGANDCVCNGKSRCHCAGVKGSRGDKGFPGLPGPPGSGGRPGPDGHAGPSGPK
GKTGPNGLVGPKGDPGPEGKEGFAGSHGLPGIPGLQGLPGLTGAPGCNGTDGDDGLPGLP
GVNGNDGYSGPPGLPGPKGESWGSINAPPGTPGHPGRGGKPGSPGYPGDQGQRGDHGPWG
SIGIPGRAGAPGSKGQEGIGGILGPRGPRGRQGPRGPPGPPGPMNSFQTGTLVLKGERGV
IGDVGEKGCKGAPGDPSDGYNTKGEKGDKGLQGPEGKKGKDGEPGQTYVGRPGRGGLLGY
PGTAGEMGEKGERGPPGQPGDVFGPEPLKGYRGDPGFPGFPGPPGRQGIEGFPGPDGPPG
HSSGINVPCPRGPNGFPGSKGHPGEPGDIYLGPSGLDGDDGDPGPPGDPGPPGQPEDSAK
RLTNGPPGMKGVPGKPGPMGYDGTYGMKGIKGEPCYDCLGSGIPGPPGPRGLPGLPGYNT
GPGAKGDPGFSGLVGLPGVQGPMGQMGFPGPQGQRGDSYSYNTPGIKGAKGDPGYPGRPG
AYALPGFPGQPGRRGEPGPPGDSYPFHGAEGDQGFPGPPGFLGIPGPVGYPGPVGYGPSG
LPGSPGDVGVPGLPGQAGTPGQKGEPSQIHPIRLPGPPGFQGLPGPPGIPGHHGAPGIPG
LPGFPGNKGESGEVFPGMPGIRGQKGDKGQPGPAGVSTLGDIGRQGSPGPPGRAGMKGDG
VPGYSGTPGAPGTPGEEGAQGPVGDPGIPGLPGNPGPNGNRGFKGQKGSKGYIGPLGPPG
NQGSCKSDFPGPKGTQGPDGYPGNPGSNGPPGEKGNPGVTGIGPFGAPGEPGLIGPSVLG
LSGLRGHKGIKGRHGIPGQPGMRGDPGPDGLPGYGPEGLPGIIGAPGQIGSPGRHGARGP
PGPPGMNGEPGLRGPPGTSASQNVIASGPPGDPGNMGYSGLCGVHGDPGSIGPKGQKGIG
RAPGLPGQRGPSGEPGVDGLLLSVGSPGSQGSPGDPGVIGPPGPKGLKGDLGIPGGPGPD
GVPGSPGNKGVNGEPNYYGYGLPGPVGQKGEPGSINPHVMKGQKGEPGSFGPLGLPGNHG
AKGNPGPVGQNGSPGYQGPEGSDGPPGSKGQLGPNGPAGEPGPQGVSGYQGPKGNQGRDG
IPGPPGPKGDTNISGGTSGRRGKTGQQGPSGSPGPLSLSLPGGPGPIGDRGIRGSPGATG
LKGLPGREGACVPGSKGDRGYPGNPGSPGNRGLPGHPVPTMPGFKGDKGYPGFTGGPGSS
GPIGESGHHGRTGPRGIPGRPGPRGDSGPPGIYGNPGGKGDPGYIPGPPGQSGVKGSPGC
PGNKGQPAVVGVRYEPGLSGPPGPPGNRGSPGSTGPSGPTGQPGQQGIKGQRGSNPSGQP
GFTGHKGDQGRSGLPGQAGRPGNPGNKGPPGRPGEGGPSYFDSFLIARHSQKTSIPECPN
GTTFIYSGYSFLFINGNERAHGQDLGTTGSCLPRFTTMPFLFCDTESTCRYASRNDYSYW
LSTDTALPANMVSITGDRQASFISRCSVCESTSNVIAVHSQTVLIPECPQGWESLWKGYS
FVMQTGAGADGSSQPLVSPGSCLESFRQVPFIECHGRGTCNYYPDSYSYWLASIDPNSMF
SKPVPHTVKGPSLQSVISRCQVCRKPWQPTDGKRGDN
NT seq
4974 nt
NT seq
+upstream
nt +downstream
nt
atggctgtgttgctgatgggcactggggccaacgattgtgtgtgcaatggaaagtcgaga
tgccactgtgcaggagtgaaaggcagcaggggtgacaaaggtttcccaggacttccaggt
cctccggggtctggaggtcgtccaggaccagatggtcatgctgggccttcaggaccaaag
ggtaaaactgggcccaatggacttgtggggcccaaaggcgatccgggacctgaaggaaaa
gaagggtttgctgggtctcatggtttaccgggtatcccaggtttacaagggcttcctggc
ctcacaggggctccaggctgcaatggaacagatggagacgatggacttcctggtttaccc
ggggttaatggcaatgatggatattcaggtccacccggtctgcctggacctaagggtgaa
tcttggggatcaataaacgcaccaccaggtacacctgggcatcctggaaggggcggaaag
ccgggaagtccagggtaccctggagatcagggacaaagaggggaccatggaccttggggc
tctatcgggattcctggtcgtgctggggctccaggatctaagggtcaagaaggcattggc
ggtatcctaggacctcgaggaccaagggggagacaaggaccaagaggcccgccgggtcca
ccgggtccgatgaacagttttcaaacagggactctggtgttgaagggtgaaagaggagtc
attggagatgtaggagaaaagggctgcaagggtgcgccaggggaccctagtgatggttat
aacaccaaaggagaaaagggagacaaaggactgcagggtccagaaggaaagaaagggaag
gatggtgaaccaggacaaacatatgtgggaaggcctggccgtggagggcttctgggatat
ccagggacagcaggagagatgggtgaaaagggagaaaggggtccccctggccaacctgga
gatgtatttgggcctgagccactgaaaggataccgcggagatcctggtttcccaggcttt
cccgggccacctgggcgtcaaggtattgaagggtttcctggacctgatggtcctccaggc
cattcatctgggataaatgtgccatgcccacgtggtcctaatggctttccgggctccaaa
gggcaccctggggagcctggggatatttatctaggaccttcaggtctagatggggatgat
ggtgatccagggcctcccggggatccgggcccacctggacaacctgaagacagtgctaaa
aggctaaccaacggtcccccaggaatgaaaggggtgccgggtaaacctggacctatggga
tatgatggaacatatggaatgaaaggaattaaaggggagccctgttatgactgtcttgga
tcaggaatccctggaccaccaggtccccggggcctacctggcctccctggatataacaca
ggaccaggtgccaaaggtgatccaggtttttcagggcttgttggcttaccaggagtacaa
ggtcctatgggtcaaatgggatttccaggccctcaaggacaaagaggagactcatattca
tacaacactcctgggataaagggagcaaaaggagacccgggataccctggcagacctggt
gcatatgcactccctggatttcctggacaaccaggtcgcagaggcgaaccaggtccccca
ggggattcgtatcccttccatggtgcagagggagaccaaggtttcccaggtccaccaggt
tttttaggcataccaggacctgttggctaccctgggccagtgggatacggacctagtgga
cttccaggaagtccgggagatgttggtgtacctggtctgcccggacaagctggaactcca
ggccagaaaggcgaacccagccagatccaccccataagacttcctggaccgcctggattt
cagggtctgcctggtccccccggaatcccaggtcatcacggagcgccaggtatcccagga
ctaccaggttttccgggaaacaaaggagaaagtggtgaggtgtttcctggaatgccaggg
atccgaggacagaaaggtgacaaggggcagccaggtcccgctggtgtttcaactcttggc
gatattggtcggcaaggttcaccaggccctcctggtcgtgcaggaatgaagggtgatggt
gtccctggatactctggcaccccaggagcaccagggacaccaggggaagaaggagctcag
gggcctgtgggagatcctgggatccctggcctacctgggaacccaggaccaaatggcaat
cgtggttttaaaggacaaaaaggaagtaaaggttatattgggccccttggacctcctggt
aatcaaggttcatgtaaaagtgattttcctggtccaaagggaactcaaggaccagacggt
tatccaggaaatccaggatctaatggtccgccgggggagaaagggaaccctggagtgacg
gggattggtccttttggcgcacccggtgaacctggcttaattgggccatcagtgctaggt
ctaagtgggcttcgtggacacaaagggatcaagggacgacatggcatccccggtcaacca
ggaatgagaggagatcctggaccagacgggttaccagggtatggaccagaagggctccct
ggaattatcggtgcaccaggccaaataggttcccctggccgacatggggcaagaggtccg
ccaggtccaccaggcatgaacggtgaaccaggtcttagaggtcctccaggcacttcagca
tcacaaaatgttattgcttcggggcccccaggggacccaggcaatatgggttactctggt
ctatgtggagtccatggagatcctggaagtattggacccaaagggcagaaagggataggt
cgagcaccagggcttcccggacaaagaggtccatcaggtgaaccaggtgttgatggactc
ctgctctcagtaggctctccagggtctcaaggatctcctggagacccgggagtcataggg
cctccaggcccaaagggattaaaaggagacctaggaatccctggagggccaggtccagat
ggtgtaccaggttcacccggtaacaaaggagttaatggagagccaaattactatggatat
ggactacctggaccagtaggacaaaagggtgaaccaggatcaattaatcctcatgtgatg
aagggtcagaaaggagaacctggttcttttggacctttaggtttaccaggaaaccatgga
gccaaagggaacccagggcctgttggtcaaaatgggtcaccaggctatcaagggcctgag
ggttcagatggacctccaggaagcaaagggcagttaggacccaatggaccagctggtgaa
ccagggccacaaggcgtcagtggttatcaaggtcctaaaggcaatcagggccgcgatggc
atccctggaccgccggggccgaaaggagacactaatatatcaggagggacatctggtagg
cgtggtaaaacaggtcaacaaggtccctccgggagccctggtcccctcagcttgtctctt
ccagggggtcctggaccaataggtgatagaggaattcgaggttcacctggagccactggt
ctgaaaggactaccaggaagagaaggagcatgtgttcctgggtcaaaaggagaccgtggc
tatccgggcaatcctggtagcccaggcaatcgtggcttacctggtcatccagttccaaca
atgccagggtttaaaggagacaaagggtacccaggttttacaggtggcccgggctctagt
ggacccataggagaatcaggccaccacggacggactggtccaagaggcatacctgggcgc
ccaggtccaagaggggattctggtcctcctggaatctatggaaacccaggtggcaaggga
gaccctggatacatcccaggccctcctggtcaatctggggtaaaaggctctcctggatgt
cctggcaacaaaggtcaacctgcagtggtcggggtgaggtatgaaccaggactttctggc
ccaccgggtccccctggcaatcgcggatccccagggagcacagggccatcaggaccaaca
ggccaaccaggtcaacagggcatcaaaggacagcgtggctccaacccaagcggccagccc
ggatttactggccacaaaggggaccaaggaagatcaggactgccaggtcaagcaggaaga
cctggtaacccaggcaacaagggccctccagggcggccaggcgaagggggtccgagttat
tttgacagttttctgattgccagacacagccagaaaaccagcatccctgaatgccctaat
ggcactaccttcatctactctggttactctttcctcttcatcaacggaaatgagagagct
catggtcaggaccttggcaccacaggaagctgtctacctcgtttcaccaccatgcccttc
ctgttttgtgacaccgaatcaacctgccgctatgcttctcgtaacgactactcctactgg
ctgtccactgacactgctttgcccgccaacatggtttccatcacaggggatagacaggcc
tcctttatcagcaggtgctcagtgtgtgaaagcacatccaatgtcatagccgtccacagc
cagacagttctgatacctgaatgtccccaaggctgggagtcactatggaaaggatactca
tttgtcatgcaaacgggagccggagcagatggctcctcccagccgcttgtttctcctggc
tcgtgtctggaaagtttccgccaagttcccttcatagagtgtcatggcaggggaacgtgt
aactactaccctgattcctatagctactggctggcctcaatagaccctaacagcatgttc
agtaaacctgttcctcacacagtgaagggaccgtctctacaaagtgtcattagccgttgt
caagtttgtaggaaaccatggcaaccaacagatggcaaacgtggggacaattaa
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