Eleginops maclovinus (Patagonian blennie): 134866018
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Entry
134866018 CDS
T09869
Name
(RefSeq) collagen alpha-3(IV) chain-like
KO
K06237
collagen type IV alpha
Organism
emac
Eleginops maclovinus (Patagonian blennie)
Pathway
emac04510
Focal adhesion
emac04512
ECM-receptor interaction
emac04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
emac00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
134866018
09140 Cellular Processes
09144 Cellular community - eukaryotes
04510 Focal adhesion
134866018
09142 Cell motility
04820 Cytoskeleton in muscle cells
134866018
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
emac04147
]
134866018
00536 Glycosaminoglycan binding proteins [BR:
emac00536
]
134866018
Exosome [BR:
emac04147
]
Exosomal proteins
Exosomal proteins of other cancer cells
134866018
Glycosaminoglycan binding proteins [BR:
emac00536
]
Heparan sulfate / Heparin
Extracellular matrix molecules
134866018
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Collagen
C4
Motif
Other DBs
NCBI-GeneID:
134866018
NCBI-ProteinID:
XP_063741979
LinkDB
All DBs
Position
6:13665309..13691163
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AA seq
1657 aa
AA seq
DB search
MAVLLMGTGANDCVCNGKSRCHCAGVKGSRGDKGFPGLPGPPGSGGRPGPDGHAGPSGPK
GKTGPNGLVGPKGDPGPEGKEGFAGSHGLPGIPGLQGLPGLTGAPGCNGTDGDDGLPGLP
GVNGNDGYSGPPGLPGPKGESWGSINAPPGTPGHPGRGGKPGSPGYPGDQGQRGDHGPWG
SIGIPGRAGAPGSKGQEGIGGILGPRGPRGRQGPRGPPGPPGPMNSFQTGTLVLKGERGV
IGDVGEKGCKGAPGDPSDGYNTKGEKGDKGLQGPEGKKGKDGEPGQTYVGRPGRGGLLGY
PGTAGEMGEKGERGPPGQPGDVFGPEPLKGYRGDPGFPGFPGPPGRQGIEGFPGPDGPPG
HSSGINVPCPRGPNGFPGSKGHPGEPGDIYLGPSGLDGDDGDPGPPGDPGPPGQPEDSAK
RLTNGPPGMKGVPGKPGPMGYDGTYGMKGIKGEPCYDCLGSGIPGPPGPRGLPGLPGYNT
GPGAKGDPGFSGLVGLPGVQGPMGQMGFPGPQGQRGDSYSYNTPGIKGAKGDPGYPGRPG
AYALPGFPGQPGRRGEPGPPGDSYPFHGAEGDQGFPGPPGFLGIPGPVGYPGPVGYGPSG
LPGSPGDVGVPGLPGQAGTPGQKGEPSQIHPIRLPGPPGFQGLPGPPGIPGHHGAPGIPG
LPGFPGNKGESGEVFPGMPGIRGQKGDKGQPGPAGVSTLGDIGRQGSPGPPGRAGMKGDG
VPGYSGTPGAPGTPGEEGAQGPVGDPGIPGLPGNPGPNGNRGFKGQKGSKGYIGPLGPPG
NQGSCKSDFPGPKGTQGPDGYPGNPGSNGPPGEKGNPGVTGIGPFGAPGEPGLIGPSVLG
LSGLRGHKGIKGRHGIPGQPGMRGDPGPDGLPGYGPEGLPGIIGAPGQIGSPGRHGARGP
PGPPGMNGEPGLRGPPGTSASQNVIASGPPGDPGNMGYSGLCGVHGDPGSIGPKGQKGIG
RAPGLPGQRGPSGEPGVDGLLLSVGSPGSQGSPGDPGVIGPPGPKGLKGDLGIPGGPGPD
GVPGSPGNKGVNGEPNYYGYGLPGPVGQKGEPGSINPHVMKGQKGEPGSFGPLGLPGNHG
AKGNPGPVGQNGSPGYQGPEGSDGPPGSKGQLGPNGPAGEPGPQGVSGYQGPKGNQGRDG
IPGPPGPKGDTNISGGTSGRRGKTGQQGPSGSPGPLSLSLPGGPGPIGDRGIRGSPGATG
LKGLPGREGACVPGSKGDRGYPGNPGSPGNRGLPGHPVPTMPGFKGDKGYPGFTGGPGSS
GPIGESGHHGRTGPRGIPGRPGPRGDSGPPGIYGNPGGKGDPGYIPGPPGQSGVKGSPGC
PGNKGQPAVVGVRYEPGLSGPPGPPGNRGSPGSTGPSGPTGQPGQQGIKGQRGSNPSGQP
GFTGHKGDQGRSGLPGQAGRPGNPGNKGPPGRPGEGGPSYFDSFLIARHSQKTSIPECPN
GTTFIYSGYSFLFINGNERAHGQDLGTTGSCLPRFTTMPFLFCDTESTCRYASRNDYSYW
LSTDTALPANMVSITGDRQASFISRCSVCESTSNVIAVHSQTVLIPECPQGWESLWKGYS
FVMQTGAGADGSSQPLVSPGSCLESFRQVPFIECHGRGTCNYYPDSYSYWLASIDPNSMF
SKPVPHTVKGPSLQSVISRCQVCRKPWQPTDGKRGDN
NT seq
4974 nt
NT seq
+upstream
nt +downstream
nt
atggctgtgttgctgatgggcactggggccaacgattgtgtgtgcaatggaaagtcgaga
tgccactgtgcaggagtgaaaggcagcaggggtgacaaaggtttcccaggacttccaggt
cctccggggtctggaggtcgtccaggaccagatggtcatgctgggccttcaggaccaaag
ggtaaaactgggcccaatggacttgtggggcccaaaggcgatccgggacctgaaggaaaa
gaagggtttgctgggtctcatggtttaccgggtatcccaggtttacaagggcttcctggc
ctcacaggggctccaggctgcaatggaacagatggagacgatggacttcctggtttaccc
ggggttaatggcaatgatggatattcaggtccacccggtctgcctggacctaagggtgaa
tcttggggatcaataaacgcaccaccaggtacacctgggcatcctggaaggggcggaaag
ccgggaagtccagggtaccctggagatcagggacaaagaggggaccatggaccttggggc
tctatcgggattcctggtcgtgctggggctccaggatctaagggtcaagaaggcattggc
ggtatcctaggacctcgaggaccaagggggagacaaggaccaagaggcccgccgggtcca
ccgggtccgatgaacagttttcaaacagggactctggtgttgaagggtgaaagaggagtc
attggagatgtaggagaaaagggctgcaagggtgcgccaggggaccctagtgatggttat
aacaccaaaggagaaaagggagacaaaggactgcagggtccagaaggaaagaaagggaag
gatggtgaaccaggacaaacatatgtgggaaggcctggccgtggagggcttctgggatat
ccagggacagcaggagagatgggtgaaaagggagaaaggggtccccctggccaacctgga
gatgtatttgggcctgagccactgaaaggataccgcggagatcctggtttcccaggcttt
cccgggccacctgggcgtcaaggtattgaagggtttcctggacctgatggtcctccaggc
cattcatctgggataaatgtgccatgcccacgtggtcctaatggctttccgggctccaaa
gggcaccctggggagcctggggatatttatctaggaccttcaggtctagatggggatgat
ggtgatccagggcctcccggggatccgggcccacctggacaacctgaagacagtgctaaa
aggctaaccaacggtcccccaggaatgaaaggggtgccgggtaaacctggacctatggga
tatgatggaacatatggaatgaaaggaattaaaggggagccctgttatgactgtcttgga
tcaggaatccctggaccaccaggtccccggggcctacctggcctccctggatataacaca
ggaccaggtgccaaaggtgatccaggtttttcagggcttgttggcttaccaggagtacaa
ggtcctatgggtcaaatgggatttccaggccctcaaggacaaagaggagactcatattca
tacaacactcctgggataaagggagcaaaaggagacccgggataccctggcagacctggt
gcatatgcactccctggatttcctggacaaccaggtcgcagaggcgaaccaggtccccca
ggggattcgtatcccttccatggtgcagagggagaccaaggtttcccaggtccaccaggt
tttttaggcataccaggacctgttggctaccctgggccagtgggatacggacctagtgga
cttccaggaagtccgggagatgttggtgtacctggtctgcccggacaagctggaactcca
ggccagaaaggcgaacccagccagatccaccccataagacttcctggaccgcctggattt
cagggtctgcctggtccccccggaatcccaggtcatcacggagcgccaggtatcccagga
ctaccaggttttccgggaaacaaaggagaaagtggtgaggtgtttcctggaatgccaggg
atccgaggacagaaaggtgacaaggggcagccaggtcccgctggtgtttcaactcttggc
gatattggtcggcaaggttcaccaggccctcctggtcgtgcaggaatgaagggtgatggt
gtccctggatactctggcaccccaggagcaccagggacaccaggggaagaaggagctcag
gggcctgtgggagatcctgggatccctggcctacctgggaacccaggaccaaatggcaat
cgtggttttaaaggacaaaaaggaagtaaaggttatattgggccccttggacctcctggt
aatcaaggttcatgtaaaagtgattttcctggtccaaagggaactcaaggaccagacggt
tatccaggaaatccaggatctaatggtccgccgggggagaaagggaaccctggagtgacg
gggattggtccttttggcgcacccggtgaacctggcttaattgggccatcagtgctaggt
ctaagtgggcttcgtggacacaaagggatcaagggacgacatggcatccccggtcaacca
ggaatgagaggagatcctggaccagacgggttaccagggtatggaccagaagggctccct
ggaattatcggtgcaccaggccaaataggttcccctggccgacatggggcaagaggtccg
ccaggtccaccaggcatgaacggtgaaccaggtcttagaggtcctccaggcacttcagca
tcacaaaatgttattgcttcggggcccccaggggacccaggcaatatgggttactctggt
ctatgtggagtccatggagatcctggaagtattggacccaaagggcagaaagggataggt
cgagcaccagggcttcccggacaaagaggtccatcaggtgaaccaggtgttgatggactc
ctgctctcagtaggctctccagggtctcaaggatctcctggagacccgggagtcataggg
cctccaggcccaaagggattaaaaggagacctaggaatccctggagggccaggtccagat
ggtgtaccaggttcacccggtaacaaaggagttaatggagagccaaattactatggatat
ggactacctggaccagtaggacaaaagggtgaaccaggatcaattaatcctcatgtgatg
aagggtcagaaaggagaacctggttcttttggacctttaggtttaccaggaaaccatgga
gccaaagggaacccagggcctgttggtcaaaatgggtcaccaggctatcaagggcctgag
ggttcagatggacctccaggaagcaaagggcagttaggacccaatggaccagctggtgaa
ccagggccacaaggcgtcagtggttatcaaggtcctaaaggcaatcagggccgcgatggc
atccctggaccgccggggccgaaaggagacactaatatatcaggagggacatctggtagg
cgtggtaaaacaggtcaacaaggtccctccgggagccctggtcccctcagcttgtctctt
ccagggggtcctggaccaataggtgatagaggaattcgaggttcacctggagccactggt
ctgaaaggactaccaggaagagaaggagcatgtgttcctgggtcaaaaggagaccgtggc
tatccgggcaatcctggtagcccaggcaatcgtggcttacctggtcatccagttccaaca
atgccagggtttaaaggagacaaagggtacccaggttttacaggtggcccgggctctagt
ggacccataggagaatcaggccaccacggacggactggtccaagaggcatacctgggcgc
ccaggtccaagaggggattctggtcctcctggaatctatggaaacccaggtggcaaggga
gaccctggatacatcccaggccctcctggtcaatctggggtaaaaggctctcctggatgt
cctggcaacaaaggtcaacctgcagtggtcggggtgaggtatgaaccaggactttctggc
ccaccgggtccccctggcaatcgcggatccccagggagcacagggccatcaggaccaaca
ggccaaccaggtcaacagggcatcaaaggacagcgtggctccaacccaagcggccagccc
ggatttactggccacaaaggggaccaaggaagatcaggactgccaggtcaagcaggaaga
cctggtaacccaggcaacaagggccctccagggcggccaggcgaagggggtccgagttat
tttgacagttttctgattgccagacacagccagaaaaccagcatccctgaatgccctaat
ggcactaccttcatctactctggttactctttcctcttcatcaacggaaatgagagagct
catggtcaggaccttggcaccacaggaagctgtctacctcgtttcaccaccatgcccttc
ctgttttgtgacaccgaatcaacctgccgctatgcttctcgtaacgactactcctactgg
ctgtccactgacactgctttgcccgccaacatggtttccatcacaggggatagacaggcc
tcctttatcagcaggtgctcagtgtgtgaaagcacatccaatgtcatagccgtccacagc
cagacagttctgatacctgaatgtccccaaggctgggagtcactatggaaaggatactca
tttgtcatgcaaacgggagccggagcagatggctcctcccagccgcttgtttctcctggc
tcgtgtctggaaagtttccgccaagttcccttcatagagtgtcatggcaggggaacgtgt
aactactaccctgattcctatagctactggctggcctcaatagaccctaacagcatgttc
agtaaacctgttcctcacacagtgaagggaccgtctctacaaagtgtcattagccgttgt
caagtttgtaggaaaccatggcaaccaacagatggcaaacgtggggacaattaa
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