Eleginops maclovinus (Patagonian blennie): 134866089
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Entry
134866089 CDS
T09869
Symbol
rb1cc1
Name
(RefSeq) RB1-inducible coiled-coil protein 1 isoform X1
KO
K17589
RB1-inducible coiled-coil protein 1
Organism
emac
Eleginops maclovinus (Patagonian blennie)
Pathway
emac04140
Autophagy - animal
Brite
KEGG Orthology (KO) [BR:
emac00001
]
09140 Cellular Processes
09141 Transport and catabolism
04140 Autophagy - animal
134866089 (rb1cc1)
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
emac01009
]
134866089 (rb1cc1)
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
emac04131
]
134866089 (rb1cc1)
03029 Mitochondrial biogenesis [BR:
emac03029
]
134866089 (rb1cc1)
Protein phosphatases and associated proteins [BR:
emac01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-1
PP1-interacting proteins (PIPs)
134866089 (rb1cc1)
Membrane trafficking [BR:
emac04131
]
Autophagy
Autophagosome formation proteins
ULK complex
134866089 (rb1cc1)
Mitochondrial biogenesis [BR:
emac03029
]
Mitochondrial quality control factors
Mitophagy factors
Parkin-independent mechanism factors
134866089 (rb1cc1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ATG11
ATG17_like
TBK1_ULD
ubiquitin
Motif
Other DBs
NCBI-GeneID:
134866089
NCBI-ProteinID:
XP_063742106
LinkDB
All DBs
Position
6:complement(16580681..16593076)
Genome browser
AA seq
1629 aa
AA seq
DB search
MKLYVFQVNNGSTLTFDTDLAVQTVLELKHAIQAKYKIAIQHQVLVVNGGECMAAERRVC
SYSAGTETNPIFLFNKEMILCDRDPTIPKTTFSIESEIQVKVEESLLMPAVFHTVASRTQ
LALEMFEVAKKLCSFCERLVHDEHLQHQGWAAIMANLDDCTLSYQKLLMKFDSSYANYQH
DLEQIKVKLSKLGTSVSVMARIPLLECLTRHSYKESMEKSSPTPGKDSDETEEEKSTDSV
LCPTDAQRPSKSSASFSASGNATSQPTGDQETNEMTDSGGLRSALLDDDDDDDDVAELTN
PSCFNVTLLDWINVQDRPNDVESVVRKCFDSINRLDPRIIQPFLTDCRDTIAKLDNQNMK
AIKGLEDRLYALDQMIASCKKLVNEQKELAQGFLANQKRAENLKDTSVLPDLCLSHTNQL
MIMLNNHRKLLDIKKKCTTAKQELANNLQVRLKWCCYVMLHADQDGEKLQALLRLLTELM
ERVRVVEALSTVPQMYCLAVVEVVRRKMFMRHYREWAYALVKDGKRLYEAEKFKRESFGK
LFRKSFLRNRLFRGLDSWPPTSFCTRKPRRFDDELPDISVDDLQYLKSCCPTEVQPFLLF
PSRVPTMCDFEPLNRHVETLHQLVKAAQSVDEMSQTITDLLNEQRTSYSQRSSVLTPQSG
SMPGSSTPRSPKTPSSLNLQGPSCQPLHVPVPAPLEDLSPDSIDAQTFDFETIGHPNMDP
VLQQGSLDLDSLAESPESDFMSAVNEFVIEVNLTSPNPTSDPTSPEMMGESLYSSVINAI
DNKRMQDTTILERENSRIIVLKQEIDKYRSAAEESHSNFRSVKEDLHHLRGVVLKEQQDF
GFVLRNMSTEVRTIVDNICEIHKLELKEQHESELLSLRQELEKQVQTLTEENQVNQNIVR
DVQHAMLELEGHMERKEKELTQLENEKERWVETEGNQTGRIKNLEQMIGEQIEEIKTLSA
SKDSLTSQLENLHFEIERSQQKIRQELEVVEQSHLKQMEDKMKQEHADKLETLTKDNQEA
LKHLAAENSAKLIETADHHAATLKEKENQMKDLEARVTELAELRCKVEVELALKESETEE
LRLLFEETKSQQAETVTSQVDAATVALSEELAVMKQQLHVKNEEHEVGLAELRSMMRDEK
DNCISELVDRHDEEIICLRNELASLQRQTEAAEKNHAEQQHKLRQESDQQAAALSEEQEK
QSRSFQDQEQELRSVIGSLQAENDLLSKQLEQVRQAMEEELEKEQASEVKSQDAFKDMEQ
QKEEMEKRLTEKIKQLEAELHETQSSKRDEGLPLQAEGPTDAGAPLSLDSALQERLQQER
ASLQSQMELLEKKKNEEMQNLKTSLIAEQQTNFNTVLTREKLKKEQIINELTEELRNVTQ
QQEKDKALIEKLSEDRASVMQEKKHLEEELNRMRSTAMVSSAFFTPHHSARETPEAAGAA
ARAPPMAGAFTSEPLSETDRLASVAAIGDDEQIDSAVEASMVSVHDNLLMSEEKQRILLL
ERTLHMKEEENKRLSQRLMSQSMSSVSSRHSDKIAIRDFQVGDLVLIILDERHDNYVLFT
VGPTLYFLHSESLTALDLKPASGTTRRPWVLGKVMEKEYCQAKKAQNRFKVPLGTKFYRV
KAVPWNRKV
NT seq
4890 nt
NT seq
+upstream
nt +downstream
nt
atgaagttgtatgtgttccaggtcaacaatggcagcacattgacatttgacactgatctt
gctgtccaaactgtcctggagcttaaacatgccatccaagccaaatacaagattgcaatc
caacatcaagtccttgttgtcaatggaggggaatgtatggctgcagagagaagggtctgc
agttacagtgctggcactgaaacaaaccccatatttctgttcaacaaagagatgatcttg
tgtgacagggatccaacgatccctaaaaccaccttctcgattgagagtgagattcaggtt
aaagtggaagagtctctattgatgccagctgtctttcacactgttgcctcacgaacacaa
cttgctctggaaatgtttgaagttgccaagaagctttgctctttctgtgagcggttggtt
catgatgaacaccttcaacaccaaggctgggctgccatcatggctaatctggacgattgc
actctgtcttaccagaagttgctcatgaaatttgactcttcatatgcaaattatcaacat
gacttggaacaaattaaggttaaactttcaaagttagggacatcagtttcggtaatggcg
agaatacctctgctggaatgtttaacaagacacagttacaaagagagcatggagaagtcc
agccccaccccaggaaaggattcagatgagacagaagaagagaaatccacagactctgtg
ctctgcccaacggatgcacagcggccctccaagtcatcagcgtccttctctgcttcaggg
aatgccacaagtcagccaactggagaccaggaaacaaatgaaatgactgacagtggtggg
cttagatctgcgctattagatgatgacgatgacgatgatgatgttgcagagcttaccaac
ccgtcatgcttcaatgtcacattattagactggatcaacgtgcaagacagacccaatgat
gtggaatctgttgtgaggaaatgctttgactccatcaataggcttgatcctcggataatt
caaccattcctgacagattgtcgtgacacaattgccaagctagataatcaaaacatgaaa
gccatcaaggggctcgaggacaggttgtatgctcttgaccaaatgattgcaagctgtaag
aagctggtgaatgaacagaaagaactcgctcagggatttttggccaaccagaagagggct
gaaaacctgaaggatacatctgttctgcctgacttgtgtctgagtcacaccaaccagctg
atgatcatgctgaacaaccacaggaagctgctcgacattaagaaaaagtgcaccactgcc
aaacaagaacttgcaaacaaccttcaagtccgactcaaatggtgctgttacgtgatgctt
catgcggaccaggatggggagaagcttcaggctctactcagacttctgacagagttgatg
gaaagagtgagggtggtggaggccctcagcactgtgccccagatgtactgcttggcggtg
gtggaggttgtcaggcgaaaaatgtttatgcgtcactacagagagtgggcttatgcactt
gtcaaggatgggaaacgactgtatgaggcggagaagttcaaaagggagtcctttggaaaa
ctctttaggaagtctttcctcagaaatcgtttgttcagaggactcgactcatggcctcca
acatcattttgtacacgaaagcccagaaggtttgacgacgaacttccagacatctcagtt
gatgacctgcagtacttgaaatcttgttgtcctacagaagtgcagcctttccttcttttt
ccctccagggtcccaacaatgtgtgatttcgagcccttaaatcgacacgtagagacgctt
caccagctggtcaaagctgcacagagtgtggatgagatgtctcaaactattactgacctg
ctaaatgaacaaaggacatcctacagccagagatcatctgtgttgaccccgcagtctgga
agcatgccagggtcctcgacaccaagatcccccaaaaccccttcctctcttaaccttcag
ggacccagctgccagcccctacatgttcccgtcccagctcctctggaggacttgtcccca
gacagcatagatgcgcaaacattcgactttgaaaccatcggccacccgaacatggacccc
gtcctgcagcagggctcccttgacttggactctctagcagagagccctgaatctgacttc
atgtccgctgtcaacgagtttgtgatcgaagtgaacttgacctctccaaacccaaccagt
gaccctacaagtcccgagatgatgggggagtcgctgtactcttcagtcatcaacgctatt
gacaacaaacgtatgcaggacaccactatactagagagggagaactcgaggatcattgtc
ctcaaacaagaaattgacaagtaccgttctgctgcagaggagtcccattccaactttaga
agtgtaaaggaggacctccatcacttgagaggtgtggttttaaaagaacagcaggacttt
ggttttgttttgaggaatatgtccacagaggtgcgcactattgtggacaacatctgtgag
atccacaagctggagctaaaggagcagcatgaaagcgagcttctctccctgcgacaagag
ctcgagaagcaagtgcaaacactaacggaggaaaaccaagtaaaccagaatattgtcaga
gatgtccagcacgcaatgctggagctggaagggcatatggagcgcaaagagaaagaactg
actcagctggagaatgagaaagagcgatgggttgaaacggagggtaatcagacgggtagg
atcaaaaatctggagcagatgatcggcgagcagattgaagagatcaagacactgtcagct
tcaaaagactctctgaccagccagctggagaatctgcactttgagattgaacgtagccag
cagaagatccggcaggagttggaagttgtcgagcagtcccatttgaagcagatggaggac
aaaatgaagcaggaacatgcagacaaactggagaccctcaccaaggataaccaggaggct
ctgaaacatctggcggctgaaaacagtgcaaagttaattgagactgctgatcatcatgcc
gctacactgaaagagaaggaaaaccaaatgaaagacctggaggctcgtgttactgagctc
gcagaactccgctgcaaagtagaggtggagcttgccctcaaagagtcggagactgaagag
ctgaggctcttatttgaggagaccaagtcgcagcaggcagaaactgtgacgtcccaggta
gacgctgcaactgtagccctgagtgaagagctggcagtcatgaaacaacagcttcatgtc
aagaatgaggagcatgaagtgggcctggcagagctgagaagtatgatgagggacgagaag
gacaactgcatctccgagctggtggacagacacgacgaggagatcatctgtttgcgcaac
gagctcgcctccctacagcgccaaaccgaagccgctgagaagaaccacgccgagcagcaa
cacaaactcaggcaggaatcggaccagcaagctgctgctctgagtgaagaacaagaaaag
cagtccaggagtttccaggatcaggagcaagagttgaggagcgttatcggcagtttgcag
gcagaaaacgacctgctctccaaacaactagagcaggtcagacaagcaatggaggaagag
ttggaaaaggaacaggcctctgaggttaaatcacaagatgcctttaaagatatggagcag
cagaaggaggaaatggagaagagactgacagagaaaataaaacagctcgaggctgagctg
catgagacacaatcctccaagagggatgaagggttgccgctgcaagctgagggcccgaca
gatgccggagcccctctgtctctcgactctgcactgcaagagcggctgcagcaggagagg
gcctccctgcagtctcagatggagctcctggagaaaaagaagaatgaggagatgcagaac
ctcaagacatcactaatcgcagagcagcagaccaacttcaacaccgttctaacccgagag
aagctgaagaaggagcagattataaacgagctcacagaggagttaaggaatgtcacccaa
cagcaggagaaggacaaagctctgatcgagaagctctcagaggaccgagctagtgtcatg
caggagaagaaacacttggaggaggagctgaaccgcatgcgcagcaccgccatggtctcc
tctgccttcttcactcctcaccactcggctcgggagaccccagaagccgcaggagctgca
gctcgagctccgcctatggctggggcttttacctctgagcctctgtctgaaactgacaga
ttggcctctgtagcagccattggagatgacgaacagatcgattcagcagtggaagccagc
atggtgtcagtccatgataacctcctgatgtcagaggagaagcagcggatcctcttgctg
gagaggactttacacatgaaggaagaagaaaacaagcgcctcagtcaaagactgatgtct
caaagcatgtcgtctgtgtcgtcacggcattcagacaaaatcgccatcagagatttccag
gtaggcgatttggttctcatcatcctggatgaaaggcatgacaactacgtgctgttcacc
gtcggtcccaccctctacttcctccactcagagtctctcactgcactggacctcaagcca
gcatcagggactacaagacggccgtgggttcttggaaaggtgatggagaaggaatattgc
caagcaaaaaaggcccagaacaggttcaaggttcctttaggaaccaagttctacagagtg
aaagctgttccctggaacagaaaagtataa
DBGET
integrated database retrieval system
