Eleginops maclovinus (Patagonian blennie): 134866323
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Entry
134866323 CDS
T09869
Symbol
hfm1
Name
(RefSeq) probable ATP-dependent DNA helicase HFM1
KO
K15271
ATP-dependent DNA helicase HFM1/MER3 [EC:
5.6.2.4
]
Organism
emac
Eleginops maclovinus (Patagonian blennie)
Brite
KEGG Orthology (KO) [BR:
emac00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
emac03036
]
134866323 (hfm1)
Enzymes [BR:
emac01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
134866323 (hfm1)
Chromosome and associated proteins [BR:
emac03036
]
Eukaryotic type
Meiosis-specific proteins
Others
134866323 (hfm1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sec63
DEAD
SNRNP200_wHTH
ResIII
Helicase_C
DEXQc_Suv3
Motif
Other DBs
NCBI-GeneID:
134866323
NCBI-ProteinID:
XP_063742496
LinkDB
All DBs
Position
6:complement(4293027..4323527)
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AA seq
1541 aa
AA seq
DB search
MRPDEMLDSDDCTLSLDNLFFEKPIVHKVKPLHHEVSPWHLEMPPSLSQVPATQDMQKEA
ESLSSLYSFPQIPKPFLPSFKGSAGFMALPSKVNSPYNYSIAEKGIDQTRDGSNILSRSD
GLWGGEGFWDYSQDVCHNAKSGDETPQDPRHTAISRRCLSLDSSKSPPLRRSLFKVQVWN
SGGDSSNNDDLRNSGSQTASRPQTFLRPVTMTTAPPPPLRMPGATARQAAPPFSPNTRFP
PPPPPLVCSAVSGRPPQQAAHAEAQDKGTKRAFVPPMTPQPLHIQGSSGSGVLRPVSEIP
AKFRSVFKEFPFFNYVQSKALDDVLYTGNNFVACAPTGSGKTVLFELAIIRLLMETSEPW
NNVKAVYMAPIKALCSQCFESWKKKFGPLGLNCKELTGDTEIDDFFEIQDSHIILTTPEK
WDSMTRKWKDNCLLQLVRLFLIDEVHVVKDETRGATLEVVVSRMKAVHAYRTAQNPETGL
SMRFVAVSATIPNVSDIADWLSDESGPATYLEMDESHRPVKLRKVVLGFPCSPNQSEFKF
DLSLNYKMANIIQTYSDQKPTLVFCSTRKGVQQAAAVLAKDARFIISIEHKQRLMNYANS
ILDSKLRDLVMFGVGYHHAGVDLCDRKLIEEAFTVGDLPVLFTTTTLAMGVNLPAHLVVI
KSTMQYVSGSCEEYSEADMLQMIGRAGRPQFDTTATAVIMTKMQTRDKYINRLNGMEIIE
SSLHTHLVEHLNAEIVLQTISDVNMALDWIRSTLLYIRALKNPTHYGFSTDLDRFGIEAK
LQELCLKNLNSLSSIDLIHMDEDINIKPTESGRLMARFCVAFETMKQFSQLSGTESLSDL
IEMVSKSREFSDIQLRVNEKRLLNTLNRDKNRITIRFPIEGKIKSSEMKVSCLIQAQLGS
ISIQEFGLTQDTARIFKNGMRISKCLSEFLSHRSKTGFSAVLHSLMLAKCFRAKLWENSP
YVSKQLEKIGQTLSTAMVNAGLTTFSKIEQSNPRELELILNRHPPFGNQIKESVLNLPTY
EVTLEQLPRYSCATAEIVVKVHLKNQAQLLSRKKAPDQHYVSLIIGNSDNTVVFLQKLSD
LVLLKCGSWSKKIEVAKASTGDEISVNLISSQYVGLDIQQKFNVYYSGARRFGTDNQHNS
PYDPSGQRAHAAANPQSAKQAATQPASAADQDPGNKRQCNHLCRNKDVCGHECCKVGVTV
ARKRLSYPESSFSSYLQDLRSRSDSLGQTPVKRLKMKMGEQSVCANMQEFAYKPRERLPT
ASWYEGSQYEAAVRPHTEAVDLTGEDFRLQLPDRVQLDCIDDYDDYVEETHSLMDEPVPT
PAVSHAYHHGSSAGSNPGISVGVEHKPPQNQISKSSAYENGSPAVPNLSAHCNNDSSSLI
PTVSFDLGDEWDDWGDFDDENLVNASEMSYQTNAKPAVQQSVSYSVTGFAVASAPALLNH
SQIKHRLTRTSLSPGFRHLGSSLATVKPQNRLTLDWNMKKPSIFQEEMTVKTPEILPNVA
PTTRGFDFFSPNLPFNSSSSVNRSTNYKEEEAFLGIFDGLF
NT seq
4626 nt
NT seq
+upstream
nt +downstream
nt
atgcgacctgatgagatgttggactccgatgactgcaccttgtccctggacaatctgttt
ttcgagaaacccattgtccacaaagtaaaaccactgcaccatgaggtcagcccatggcac
ctggaaatgcctccgtctctttctcaggttccagccactcaggatatgcagaaagaggca
gagtctctctcttctctatacagtttcccacaaatacccaagccattcctgccttctttt
aaaggatcagctggctttatggctctaccatcaaaagtcaacagtccatacaattatagc
attgctgagaaagggattgatcaaactcgggatggcagcaatatcctcagcagaagtgat
ggcctttggggaggtgaaggcttctgggattattctcaggatgtctgccataacgccaaa
agtggggatgaaaccccgcaggaccctcgtcatacagccataagcaggaggtgtttgtct
cttgacagcagtaaaagcccacctctgcggagaagcttgttcaaggtccaggtgtggaac
agtggaggtgactcgtcaaacaacgatgacctcagaaacagcggcagccagacagcatcc
agacctcaaacttttctcaggccggttaccatgacgacagcgcctcctcctcctcttcgg
atgccaggggcgacagctaggcaggcggctcctcctttctccccaaacacccgcttccct
ccccctccccctcccctggtgtgctctgcagtgagcggccgccccccgcagcaggcggca
catgctgaggcgcaggacaagggcacaaagagagccttcgttcctcccatgacgcctcag
cctcttcacatacaagggtcctctgggtctggagttctgagaccggtttctgaaatccca
gcaaagttcagatccgtcttcaaagagttcccctttttcaactacgttcagtccaaagca
ctggatgatgttctttacacgggtaacaactttgtggcttgtgcccctactggatctggt
aaaacggtgctgtttgagctggccatcattcgtctgttaatggagacctcagagccctgg
aataatgtcaaagctgtctatatggcccccatcaaagctctgtgcagccagtgctttgag
agctggaagaagaagtttgggcctctggggctgaactgcaaggagctgacgggcgacacg
gagatcgatgacttcttcgaaatccaggactcgcacatcatccttaccacgcctgaaaag
tgggacagcatgaccagaaaatggaaggacaattgcctactgcagctggtccggctattc
ctcatcgatgaggtgcatgtggtgaaggatgaaacccgcggggccacgctggaggttgtg
gtgagcaggatgaaggcggtgcatgcctatagaacagcacagaatccagagactggcctc
tccatgaggttcgtggcggtatcagccaccatccccaacgtctcggatatcgcagactgg
ctgtctgatgagagcggtccggccacatatctggaaatggacgagagccaccgtccagtg
aagctgaggaaggtggtgctgggattcccctgcagtcccaaccaatcagagttcaagttt
gacctgtcgctcaactacaagatggccaacatcatacagacgtactctgaccagaagccc
acactcgtgttctgctctacaaggaaaggagtccagcaggcagctgcagttctggccaag
gatgctcggttcattataagcattgagcacaagcaaaggctgatgaactatgcaaactct
attctggattccaaactaagagatctggtgatgtttggagttggataccaccatgcagga
gtggacctgtgtgataggaagctgatagaagaggccttcactgtgggagacctgcctgtc
ctcttcaccaccacgactctggccatgggggtgaacctgcctgctcatctggtggtcatc
aagtctaccatgcagtatgtgtctggctcctgcgaggagtacagcgaggcggacatgctg
cagatgataggccgagcaggaagaccacaatttgacacaacagcgactgcagtgatcatg
accaagatgcaaaccagagacaaatacatcaatcgattgaatggaatggaaatcattgag
agcagcctacacactcacctggtggagcacctgaacgctgaaattgtcctccaaaccatc
agcgatgtcaacatggctctggactggatccgctccaccctcctctacatccgagccctc
aagaaccccacacactatggtttttccaccgacttagacagatttgggattgaggcaaaa
ttgcaagagctttgtctgaagaacctcaactctctgtcctccatcgatctgatccacatg
gatgaggatatcaacatcaaaccaacagagagcggcaggttgatggctcggttctgtgtc
gcctttgaaaccatgaaacagttcagccagctgtccggcactgagagcctgtccgacctg
atcgagatggtgtcaaagagcagagagttcagcgacattcagctgagagtgaacgagaaa
aggctcctgaacaccttgaacagagacaagaacaggatcaccatcaggtttccaatcgaa
ggaaagatcaaatccagtgagatgaaagtgagctgcttgattcaggctcagttgggctcc
atttcaatccaagagtttggactcacgcaggacacagcaaggatcttcaagaatggcatg
cgcatcagcaaatgcctgtcagagtttctgagtcaccgatccaagacgggcttctctgct
gtgctccactccctgatgctagctaagtgcttcagagctaaactgtgggaaaactcgccc
tatgtctccaaacagctggagaaaataggccagaccctgtcaaccgccatggtgaacgct
ggactcaccactttcagcaaaatagagcaaagcaaccccagagagctggagctgatcctc
aatagacatccaccatttggcaaccaaatcaaagagtctgttctgaacctccccacgtat
gaagtgactttggagcagcttcccaggtatagctgtgctacagcggagatcgtagtgaag
gtacacctcaaaaaccaagcacagctgctgtctaggaaaaaggctccagaccagcattac
gtctctctgattattggaaactctgacaacacggtggtcttcctacagaaactctcggac
ttggtgctgttgaagtgtggtagctggtcgaagaagattgaagtggcgaaggcctcaaca
ggagacgagatcagcgtcaatctcatcagctcacaatatgtgggcctggacatccaacag
aagtttaacgtctactattctggagccaggaggtttggaactgataatcaacacaactct
ccgtatgatccgagtggacagagagcgcacgctgcagcgaaccctcagtccgccaagcag
gctgcaactcaacctgcctctgctgcagaccaagatccaggcaataaaagacagtgcaac
cacctctgcaggaataaggatgtctgtggccatgaatgctgtaaagtaggtgtcactgtg
gcccggaagaggttatcttatccagaatccagtttctcctcctacctgcaagacctgagg
agcaggagtgactcactcgggcagactcctgtcaaacgactcaagatgaagatgggcgag
cagtctgtgtgtgccaacatgcaggagtttgcctacaaacccagagagaggctacccact
gcttcctggtatgaaggaagtcagtatgaagctgcagttagacctcacactgaggcggtg
gatctgactggggaagacttcagacttcagcttccagacagagttcaactggactgcatt
gatgattacgatgactatgtggaggagacgcacagtttgatggacgagcctgtcccaaca
cctgctgtgtcccacgcttaccaccatggttcctcagcggggagcaacccagggatcagt
gtcggtgtggagcacaaacctcctcaaaaccagatcagtaaaagctcagcttacgagaac
gggtccccggctgtgccgaacctgagcgctcactgcaacaacgattcatcctcactcatc
cccacggtcagcttcgacctgggagatgaatgggacgactggggggactttgatgatgag
aacttggtgaatgccagcgagatgtcgtatcaaactaatgctaaacctgcagtccagcag
tctgttagctacagtgtgacaggctttgctgtagcatctgcaccagcactccttaatcac
tcacaaataaaacatcggctcaccagaacatctctgagtcctggattcagacatctagga
tcctcattggccacagtcaaaccacaaaacagactcacactcgactggaatatgaagaaa
ccaagcatattccaagaagagatgacagtgaaaaccccagaaattctccccaacgtggcc
cctactaccagagggtttgatttcttctcaccgaacctcccatttaacagcagctcatct
gtcaacagaagcacaaactacaaagaagaggaagctttcctggggatatttgatggatta
ttttag
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integrated database retrieval system
