KEGG   Eleginops maclovinus (Patagonian blennie): 134866443
Entry
134866443         CDS       T09869                                 
Symbol
cop1
Name
(RefSeq) E3 ubiquitin-protein ligase COP1
  KO
K10143  E3 ubiquitin-protein ligase RFWD2 [EC:2.3.2.27]
Organism
emac  Eleginops maclovinus (Patagonian blennie)
Pathway
emac04115  p53 signaling pathway
emac04120  Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:emac00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   04120 Ubiquitin mediated proteolysis
    134866443 (cop1)
 09140 Cellular Processes
  09143 Cell growth and death
   04115 p53 signaling pathway
    134866443 (cop1)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04121 Ubiquitin system [BR:emac04121]
    134866443 (cop1)
Enzymes [BR:emac01000]
 2. Transferases
  2.3  Acyltransferases
   2.3.2  Aminoacyltransferases
    2.3.2.27  RING-type E3 ubiquitin transferase
     134866443 (cop1)
Ubiquitin system [BR:emac04121]
 Ubiquitin ligases (E3)
  Single Ring-finger type E3
   Other single Ring-finger type E3
    134866443 (cop1)
  Multi subunit type E3
   Cul4 complex
    Target recognizing subunit (DCAF)
     134866443 (cop1)
SSDB
Motif
Pfam: WD40 WD40_Prp19 WD40_CDC20-Fz Beta-prop_TEP1_2nd WD40_WDHD1_1st Beta-prop_EML_2 WDR55 Beta-prop_EIPR1 Beta-prop_RIG_2nd zf-C3HC4_2 EIF3I Beta-prop_TEP1_C Beta-prop_WDR19_1st zf-C3HC4 Beta-prop_CAF1B_HIR1 WD40_MABP1-WDR62_2nd zf-RING_2 Beta-prop_EML zf-RING_UBOX zf-C3HC4_4 Beta-prop_WDR90_POC16_2nd zf-C3HC4_3 zf-RING_5 RING_XB3-XBAT31 Beta-prop_DCAF4 WD40_RFWD3 Beta-prop_WDR35_TULP_N WD40_like Beta-prop_Vps41 Beta-prop_IFT140_1st Beta-prop_DCAF12 Beta-prop_IFT122_1st Beta-prop_NUP159_NUP214 zf-rbx1 zf-RING_10 WDR90_beta-prop_4th UvrD-helicase zf_C2H2_10
Other DBs
NCBI-GeneID: 134866443
NCBI-ProteinID: XP_063742698
LinkDB
Position
6:complement(9506309..9523460)
AA seq 710 aa
MMSSNRPQQSPGGASSVPSTSSSSSTGNSNGSGGSNAITSNGNNSANVVPSRTLPGASEG
ALSGPNLATVPSSRPSFAPLSRPSASSGSRKKSHHQAPLYNGLLNSYEDKSNDFVCPICF
EMIEEAHMTKCGHSFCFKCIRQSLEDSNRCPKCNYIVDNVDQLYPNFLVNELILKQKQRS
EEKRLKLDHPNGSRWQVFQDVLSPDQENLDLANVNLMLELLVQKKKQLEAESQAAQRQIL
MEFLKEARRNKREQLEQLQKELNFLEEDIKRVEEMSGLYCPMMEAECTVPNVEAPSPAPS
CSSIIEPPDYSQPPGFGGTTQGKRQTWYNSTLASRRKRLTAHFEDLEQCYFSNKMSRITD
EGRNLNQLDDFMECLSKFTRYNSVRPLATLSYASDLYNGSSIVSSIEFDRDCDYFAIAGV
TKKIKVFEYGTVIQDAVDIHYPVNEMTCNSKISCISWSSYHKNLLASSDYEGTVILWDGF
TGQRSKVYQEHEKRCWSVDFNLMDPKLLASGSDDAKVKLWSTNLDNSVASIEAKANVCCV
KFSPTSRYHLAFGCADHCVHYYDLRNTKQPIMVFKGHRKAVSYAKFVNGEEIVSASTDSQ
LKLWNVNKPHCLRSFKGHINEKNFVGLASNGDYVACGSENNSLYLYYKGLSKTLLTFKFD
TVKSVLDKDKKEDDTNEFVSAVCWRALPDGESNVLIAANSQGTIKVLELV
NT seq 2133 nt   +upstreamnt  +downstreamnt
atgatgtcaagcaaccggccacagcaaagccccggtggggcgagctcagtgcccagcacg
agtagcagcagtagcacggggaactcaaacggtagcggtgggagcaacgccatcacaagt
aatgggaacaattctgcaaatgttgtgccctcccggaccctgccaggagccagcgagggc
gccttgtcggggccaaatttggcaaccgtaccgtcgtctcggcccagctttgctcccctg
agcagaccctctgcgtcttcaggcagccgaaagaaatcccaccaccaagcacccctttac
aacggcctcttgaattcatacgaagataaaagcaacgattttgtctgccctatttgcttc
gagatgatagaagaggcacacatgacaaagtgtggccacagtttttgtttcaagtgtatc
cgccagagtctggaggacagcaatagatgtcccaagtgtaattatattgtcgataacgtt
gatcagctttacccaaactttcttgtaaatgaactgattcttaaacagaaacagaggtcg
gaagagaagagactaaaactagatcatcccaatgggtctaggtggcaggtgttccaggac
gtgttgagtcctgaccaggagaacctggacctggcaaacgtcaacctgatgctggagctc
ctagtccagaaaaagaagcagctggaggcggaatcccaagccgctcagagacagatcctt
atggagttcctcaaagaagccaggagaaacaagagagagcaacttgagcaactgcagaaa
gagctcaactttctcgaggaggacattaaacgtgtggaggaaatgagcggcctgtactgt
cctatgatggaggcggagtgcacagtgcctaatgtggaggctccatcaccagcacccagc
tgcagcagtattattgagcccccagactacagccagcctccgggatttggtggaacaacc
cagggcaaaagacagacctggtacaacagcaccctggcgtcacggaggaagaggcttact
gctcattttgaggatctggaacagtgctacttctccaacaaaatgtcacgcatcacagat
gaaggcaggaacctgaaccagctggatgatttcatggagtgcctgtcaaagttcacccgc
tacaactctgtgcggccgctcgccaccctctcctacgccagtgacctgtacaacggctcc
agtattgtctccagtattgagtttgaccgtgactgtgactacttcgccatcgccggcgtg
actaagaagatcaaggtgtttgagtacggcactgtgatccaggatgccgtggacatccac
taccctgttaatgaaatgacctgcaattccaaaatcagctgtatcagctggagcagctat
cacaagaaccttctggccagcagtgactatgagggaactgtgatcctgtgggacgggttc
acaggccagcggtccaaagtctaccaggagcatgaaaaaaggtgttggagtgtcgacttt
aatctgatggaccccaagctgttagcttccggctctgatgatgctaaagtgaagttatgg
tcgaccaatcttgacaactctgtggccagcatcgaggccaaggctaacgtctgctgtgtg
aaattcagtccgacctccaggtatcatctggcattcggctgtgcagaccactgtgtccac
tactatgatctacgcaacactaagcagccaatcatggtgttcaaaggccacaggaaggcg
gtgtcctacgctaagttcgtcaacggagaggaaattgtttctgcttcgacagacagtcag
ctgaagctgtggaacgtcaacaaacctcactgcctgcgctccttcaagggtcacatcaac
gagaagaacttcgtaggcctggcctccaacggggactatgttgcctgtggcagtgaaaac
aactccctgtacctgtactacaaaggcctttccaagacactgttaacattcaagtttgac
actgtgaagagtgtcctggacaaagacaagaaggaggacgacaccaacgagttcgtcagt
gccgtctgctggagagctctgcctgatggagagtcaaatgtactgattgctgcaaacagt
caaggaacaatcaaggtgctggaactcgtctga

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