Eleginops maclovinus (Patagonian blennie): 134866607
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Entry
134866607 CDS
T09869
Symbol
ndc1
Name
(RefSeq) nucleoporin NDC1 isoform X1
KO
K14315
nucleoporin NDC1
Organism
emac
Eleginops maclovinus (Patagonian blennie)
Pathway
emac03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
emac00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
134866607 (ndc1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
emac03019
]
134866607 (ndc1)
Messenger RNA biogenesis [BR:
emac03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
134866607 (ndc1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ndc1_Nup
Motif
Other DBs
NCBI-GeneID:
134866607
NCBI-ProteinID:
XP_063742913
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All DBs
Position
6:19735389..19743433
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AA seq
669 aa
AA seq
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MFSAEQSCWFVRKVICWRAVASIAWAVLLLPPITAVFVILSRFSLLHPIQTVSECLTFLT
SASVIFSFILLCGVIIMVGFLNLEYYTVIPTIACSKIALLGQLLHPRHFVNSLAHCIMGI
IVAWCCAITIGGRYEAVAYPCTPGDGADSSHQMCLNEYHFILLLAGAFVGLSHSMLGVIY
NMNYVPFHTVQQYKYLRFKGSLPMLVKCSATQALYSVRNYIVLYFFLGYIPKAWICKTLN
LHLNSSVHPLDSIAGLLDLNLLYQLWVSAGFLLLTWHVTLLLFRIFVTEVYSFAVQSSFT
EDAHQCLPKVLTGKQSMILKFLALQDLALLSQHSPLRRVEVFSLSQPGGHPHNWNAISKE
CLSLLSDLTQRLIAYHDTVATNGRAKSLSTGSERKTSSETSVTSGTDDLMSPRPTFLMKT
PASVFARSIVGSPLTAPFTPDLDSPFASPALRRLTAPPDPFSPWSGTVQSPHIMRRVPKL
WSTSTDSQVNGSPPASPASVPSPKQEQSKPSLLAQFLQNRKEQVKHFLAKRVLIMYLFNK
LPEASSQALFADSQAHIWALEGLSYLVQASFSEDQFGVVQTALPSILSCMLVLQEAVDRH
FKLPHASSKPVRSASSLGDSTHKTLRFALRATLKTAIYRITTTFGNHLNAIQMSAEHRKR
LQQFLENKE
NT seq
2010 nt
NT seq
+upstream
nt +downstream
nt
atgttttctgctgagcaaagctgttggtttgtccgcaaggtaatttgctggagagctgtg
gcgagtattgcttgggctgtcctattgttgccacccatcacagccgtttttgtaatcctc
agcaggttcagtctccttcatccgatccagacggtatcagaatgtctgaccttcttaacg
agtgcaagtgtcatattctccttcatcctgctttgtggagtcatcatcatggtggggttc
ctcaacctggaatattatacagtcattccaactattgcatgctcgaaaatcgccctgttg
ggtcagctgctccaccctcgtcactttgtcaattccctggcccactgcatcatgggaata
atcgtggcttggtgttgtgccatcaccatcgggggcagatatgaggcggtcgcctaccct
tgcacaccgggggatggcgctgacagctctcatcagatgtgtctgaacgagtatcacttc
atccttctgctggctggagccttcgttgggttatctcacagtatgctgggtgtgatctac
aacatgaactatgtgccttttcacactgttcagcaatacaaataccttcgctttaaggga
tccctacctatgttggtgaagtgcagtgccactcaggcgctttactcggtcaggaactac
attgttttgtatttctttttgggatacattccaaaagcatggatttgtaaaacactgaat
ctgcatttgaacagctctgtccaccctcttgacagcatagctggactgttggacctaaac
ctgctctaccagctgtgggtcagtgccggtttcctcctcctcacatggcacgtcacactg
ctgctctttaggatctttgttactgaggtgtacagtttcgctgtgcagtcttcttttacc
gaggatgcccatcagtgtcttcctaaagttcttaccggcaagcagtccatgatattaaag
tttttagctctgcaggatcttgctctgctctctcaacactccccactgagacgcgtggag
gtcttcagtctgagtcagccaggtggccatcctcacaactggaacgccatcagtaaggag
tgtctgtctcttctgagtgatctcacccagagactcatagcctatcatgacactgtagca
accaatggccgggccaaatcactgtctactgggagtgagaggaagacttcatctgagaca
tcagtaacctcaggtacagatgatctgatgagcccgaggcccacctttctgatgaaaacc
ccagcgtcggtctttgctcgctccattgttggcagccctctgacggcacccttcactcct
gacctggacagcccttttgcttctcccgccctgcggcgtcttactgctcctccggaccca
ttttccccttggtccggtacagtgcagagcccacacatcatgaggagagtcccaaaactc
tggtccacctctacagattcacaagtcaatggaagtcccccagcctcccctgcctcagtt
cccagtcccaaacaggaacagtccaaaccaagtctcctggctcagttcctccaaaacaga
aaagaacaggttaaacatttcttggcaaagcgcgtgctgataatgtatttgtttaacaag
cttccagaagcctccagtcaagctctgtttgcagacagccaggctcacatctgggcttta
gaaggactgtcgtatctggttcaagcctccttctcagaagaccagtttggggttgtacag
actgcattacccagcattctcagctgtatgctggtcttacaagaggctgtagatcggcac
ttcaagctgcctcacgcctccagtaagcccgtcaggtcggccagcagcctgggagactcc
actcacaaaacactgcgctttgccctcagagccactctcaagactgccatctacaggatt
actacgacttttggaaatcacttaaatgctattcagatgtctgcagagcaccggaaaaga
ctgcagcagtttctggaaaacaaggagtaa
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