| Entry |
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| Symbol |
bard1
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| Name |
(RefSeq) BRCA1-associated RING domain protein 1 isoform X1
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| KO |
| K10683 | BRCA1-associated RING domain protein 1 |
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| Organism |
emac Eleginops maclovinus (Patagonian blennie)
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| Pathway |
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| Brite |
KEGG Orthology (KO) [BR:emac00001]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
134866865 (bard1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:emac03019]
134866865 (bard1)
04121 Ubiquitin system [BR:emac04121]
134866865 (bard1)
03036 Chromosome and associated proteins [BR:emac03036]
134866865 (bard1)
03400 DNA repair and recombination proteins [BR:emac03400]
134866865 (bard1)
Messenger RNA biogenesis [BR:emac03019]
Eukaryotic type
mRNA processing factors
3' end processing
Negative regulators of mRNA 3' end processing
134866865 (bard1)
Ubiquitin system [BR:emac04121]
Ubiquitin ligases (E3)
Multi subunit type E3
BRCC complex
134866865 (bard1)
Chromosome and associated proteins [BR:emac03036]
Eukaryotic type
Centrosome formation proteins
Centrosome duplication proteins
Regulators of centriole replication
134866865 (bard1)
DNA repair and recombination proteins [BR:emac03400]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
BRCA1-core complex
134866865 (bard1)
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| SSDB |
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| Motif |
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| Other DBs |
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| LinkDB |
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| Position |
7:14408513..14430025
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| AA seq |
795 aa
MDNIAVVPTQDWKNTKEAVANFRQLLLCSKCSNLMTEPLCLGMCEHMLCRSCAGPGAGDG
CVVCQSPAWVKDIKINRQLSSIIQLFCGLESLLNPIELPAESSLAEIQTQPQSPVFKHKK
NFKIWFSPRSRKVRCTVQKPSEVTVPESTSPGKTAAAKLDTFTAPSQDLSVFNFTPSSQD
SDCSSSERCKNEKRKKRSTKKTAPSRKVSVLGATEATRKQSNQKMMKNRLVAINQQWGTT
EEMDALKEKELSHAEGPRRSSKRVSFISPVVTSAETLTEGPQVRTNELDTTRESLSGGSS
TALNDQTQPGQEMTDSVDKQPPDTRIPEKHQDRSPLKPSSKRSRPEEKDATLETTPKRPR
ASPGRRRRSQMSPADLSPFSASPKGDKSVKNSRKEQGGSPLVPSTVGKKSPCSPCPSVGR
TPSGSPAVMKRNHKGETPLHLAAIKGNVEAVKELLEQGADPNLKDNAGWTPLHEACNLGH
LPVVEVLVSRGALLNTPGYKNDSPLHDAVRNRHPAIVKLLLQQGASQSVLNQYGKRPADY
AASPEMLETFQEASEGNQCADTSLSPSASLSMVSDCVRRDEMAVFLTTKLSQTEQLQVAE
LGELLGGRMADTFSGSVSHVVVPEGHMPTTSSALLGLLAGCRVVKFSWVEACLQAGKWMP
ENEHEAGEGPQRSRINRCSLLPPLFDGCFFFLLGSFKAPSKDELTKLLREGGGQLLSRQP
KPDSDVTQTLSAAAYHALPGSDQALCTQYIIFDCQGPHKPAVVRRGKVWSAPSSWIIDCI
AAFRLLPVSDPQTSV |
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| NT seq |
2388 nt +upstreamnt +downstreamnt
atggataatattgccgtcgttcctacacaggattggaagaacactaaggaggcggttgca
aactttcgacaactgctgctttgctccaaatgctcgaatttaatgacggagcctttgtgt
ctaggaatgtgcgagcatatgctgtgcaggtcctgtgctggccctggggccggagatggc
tgcgtggtatgtcagagtcctgcgtgggtgaaggacattaaaatcaacaggcagctcagc
agcatcatacagctcttctgcggtttggagtccttgctcaatccaatagaactgccagca
gagtcctccctagctgagatccaaactcaacctcaaagtcctgtcttcaaacacaagaaa
aacttcaagatctggtttagcccccgaagccgcaaggtacgctgcacagtgcagaagcct
tcagaggtcaccgtaccggagagcacatctcctggaaaaacggctgcagcaaagctagac
acctttactgctccaagtcaggacttgtcagttttcaatttcaccccgtcctcccaagac
tcagactgttcctcttctgagcgatgcaaaaatgaaaaaaggaagaagagatcaactaag
aaaacagccccgagcaggaaggtttcggtgcttggagccactgaggccacacggaaacag
agcaaccagaagatgatgaagaacaggctggtggctataaaccagcaatgggggactacc
gaagagatggatgctttaaaggaaaaggagctgtcccacgctgaagggccaagaaggtcc
agcaaaagagtttccttcataagccctgttgtcacgtctgccgagactctgactgaaggg
ccacaagtgcgtactaatgaactcgacaccacgagggagagtctctcaggaggcagcagc
actgcactgaatgaccaaacacagcctggtcaggaaatgacggacagtgtcgacaagcaa
ccgcccgacactcgcattcctgaaaagcaccaagacagatctcccctaaagccttcatca
aaaagatccagaccggaggagaaagatgccactttggagaccacgccaaaacggcccagg
gcttccccaggcaggcggagaagatcacagatgtctccagctgacctgagccctttttcg
gctagccccaaaggtgataaaagtgtcaaaaactcaagaaaagagcaaggaggcagccca
cttgtcccatccactgttggaaaaaaatctccctgttctccctgtccatctgtgggacgg
accccctcagggagccctgcggtcatgaaaaggaaccacaagggcgaaacgccgctgcat
ctagctgctataaagggcaatgtggaggctgtcaaggaactcctggagcagggcgctgac
cccaacctgaaggataatgctgggtggacccctctgcatgaagcgtgtaacctgggtcac
ctgccggttgtggaggtgttggtctcaaggggggccctgttgaatactcctggatataaa
aatgactctccactccacgatgctgtgaggaacagacacccggccatcgtcaaactgctg
ctgcagcaaggagcctcgcagagcgtacttaaccagtatggaaagcggcctgcagattac
gcagcgagtccagagatgctggagactttccaggaagcctcagaagggaaccaatgtgct
gatacatctctcagcccctctgctagtctctccatggtgagtgactgtgtgaggagggat
gaaatggcggtctttctgaccactaagctgtcacagacagaacaacttcaagtggccgaa
ctgggagagctactgggagggaggatggcagacaccttctctggctcagtgagccatgtc
gtggtgccagaaggacacatgcccaccaccagctccgccctcctgggtcttcttgctggc
tgccgggttgtcaaattcagctgggtggaggcatgtctacaggcaggcaagtggatgccc
gaaaatgagcacgaagcgggagaaggcccacagcgaagtcgcatcaacagatgtagcttg
ctccctccgctcttcgatggctgtttcttcttcctcctgggttccttcaaggcaccttcc
aaagacgagctcaccaagctgctccgggaaggaggaggtcaactcctgagccggcagccc
aagcccgacagcgacgtgacacaaaccctgagtgctgcggcctaccacgctctgccgggc
tctgaccaggccctctgcactcagtacataatctttgactgccagggccctcacaagcca
gcagtagtgaggcgaggtaaggtgtggtcagcgccctccagctggatcatcgactgcatc
gctgccttccgcctcctccccgtgtcagaccctcaaacatcagtttaa |
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