Eleginops maclovinus (Patagonian blennie): 134867313
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Entry
134867313 CDS
T09869
Symbol
hdac6
Name
(RefSeq) histone deacetylase 6 isoform X1
KO
K11407
histone deacetylase 6 [EC:
3.5.1.98
]
Organism
emac
Eleginops maclovinus (Patagonian blennie)
Brite
KEGG Orthology (KO) [BR:
emac00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
emac01009
]
134867313 (hdac6)
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
emac03019
]
134867313 (hdac6)
04131 Membrane trafficking [BR:
emac04131
]
134867313 (hdac6)
03036 Chromosome and associated proteins [BR:
emac03036
]
134867313 (hdac6)
Enzymes [BR:
emac01000
]
3. Hydrolases
3.5 Acting on carbon-nitrogen bonds, other than peptide bonds
3.5.1 In linear amides
3.5.1.98 histone deacetylase
134867313 (hdac6)
Protein phosphatases and associated proteins [BR:
emac01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-1
PP1-interacting proteins (PIPs)
134867313 (hdac6)
Messenger RNA biogenesis [BR:
emac03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
Stress granule specific factors
134867313 (hdac6)
Membrane trafficking [BR:
emac04131
]
Autophagy
Aggrephagy
Other aggrephagy associated proteins
134867313 (hdac6)
Chromosome and associated proteins [BR:
emac03036
]
Eukaryotic type
Histone modification proteins
HDACs (histone deacetylases)
Class II HDACs
134867313 (hdac6)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Hist_deacetyl
zf-UBP
zf-UBP_var
Motif
Other DBs
NCBI-GeneID:
134867313
NCBI-ProteinID:
XP_063743860
LinkDB
All DBs
Position
1:complement(25357887..25369076)
Genome browser
AA seq
1098 aa
AA seq
DB search
MQSGSGSPGSGKKSVRRSPRLSPQCPSDSKGKEERKGGSSLQEAKRRGKMDRSRDEGDEE
LNDRLQTLDLSSQSAARGTGLVYSEIFTHHKNLWDSSHPECPDRVTSIMEELQRQELLSH
CVTVEPREASEEELLLSHTKQYVDLMRSTQTMEESDLQTLSEKYDSVYIHPESFQVCVKA
VGSVLQLVDQVMTSELRNGFAVVRPPGHHAQSNTSNGFCIFNNVAIAARYAQTRHSVRRV
LIVDWDVHHGQGIQYQFQEDPSVLYFSVHRYEEGSFWPHLSESDSQFVGSGRAEGRNINL
PWNKTGMTDADYIAAFQQLLLPVAYEFQPQLVLVSAGFDAAVGDEKGGMCVNPQCFHILT
HMLMSLAEGRLVLALEGGYNLQSTAEGAAACVRALLGGACPPLTPPTTPSDSALQSISQT
VSALYPHWVSLQTLEGSRLAEGRVIRTTTNEQSTKHTDPPPSVARTTGLVYDEKMMEHLN
LWDRHHPEQPQRIFKIFAKHQQLGLVGRCKRIPTRLATEGELATCHSVQHIEQMKATAEM
KPRDLHKLGLEFNSIFINNQSYQCALLAAGGCFSAVERILSGEVSNGVAIVRPPGHHAEK
DSPCGFCFFNTAAVTARHAQKISHDAPLRVLILDWDVHHGNGTQHMFEDDDSVLYVSLHR
YDNGTFFPSSLDAAPDRVGKSKGAGFNVNVAWSGGRMGDSDYLAAFHSVIMPIATEFNPG
LVLVSAGFDAARGDPLGGYNVTPEGYAHLTHLLMSLAGGRVLLILEGGYNLSSISDSMAM
CTSVLLGDPPPSLATPFPPPHHSAVATINEVIRHHAPYWKSLRIRIPESVRVSVPSPKHR
GKRSSKGKGRKSEQSSTNKPPLPPTGQQNTTTECGLEQLTQGLAGLDISQIAANQAPATS
TPVGGARPKVRQSPEKVESAALTPENSQSKDSTQTQDVTAAAPDSVAPGDKPASEAGAGP
EEEGACGWSKPQTSLELTCGGQADTPLYVVDPLSWCPHLDVVKPLPATGIDIFQPCQDCG
SEAENWICLTCYQVFCGRYVNEHMVTHGVVSEHPMVLSFCDLSVWCYLCESYVHNQILFE
AKNSAHCAKFGEEIPPWS
NT seq
3297 nt
NT seq
+upstream
nt +downstream
nt
atgcagtctggttcaggttctccgggatctggaaagaagtcggtcagaagatctccccga
ctgtctcctcagtgccccagcgacagtaaaggaaaggaggagaggaaaggaggaagcagt
ctgcaggaggcgaagaggagaggaaagatggataggagcagagacgagggcgatgaggag
ctgaacgacagactgcagacgctggatctgtccagccaatcagcagccagaggaacaggt
ctggtttactctgagatcttcactcatcataagaacctgtgggattccagccatccagaa
tgtcccgaccgagtgacgtccatcatggaggagctgcagagacaggagctgctgtctcac
tgcgtcacagtggagcccagagaagcttcagaagaagagctgctgctctctcacacgaaa
cagtatgtggatttgatgaggtcgacgcagacgatggaagaaagtgatcttcaaactctg
tcagagaaatacgattctgtgtacattcatcctgagtccttccaggtgtgtgtgaaggcg
gtgggttcagtcctgcagctggttgatcaggtgatgacctctgaactccggaacggattc
gccgtcgtcagacctccaggtcatcacgctcagtccaacacctccaacggtttctgcatc
ttcaacaacgtggcgatcgcagctcgatacgctcagaccagacactcagtccgcagggtg
ttgatagtggactgggatgttcatcacggtcagggtatccagtaccagttccaagaagac
cccagtgtcctgtacttcagtgtgcacaggtatgaggaggggtccttctggcctcacctc
tcggagtctgacagtcagtttgtcggcagtggacgagctgaaggcaggaacatcaacctg
ccctggaacaagacggggatgacagacgctgattacatcgccgcttttcaacaactgctg
ctgcctgtagcctacgagtttcagcctcagctggttctggtctctgctggatttgatgcc
gctgtcggagatgagaagggggggatgtgtgtgaatcctcagtgtttccacatcctgact
cacatgttgatgagtttggcagaaggtcgactcgtcctcgctctcgaggggggttataac
ctccagtcgacagcagagggcgctgcagcatgtgtcagagctctgctgggaggagcctgt
cctcccctgactccgcccaccactccgtctgacagtgctctgcagtccatctctcagaca
gtctcagctctgtatcctcactgggtctccctgcaaacactagaaggcagtcgattggct
gaggggcgtgtcatcagaacaacaaccaatgagcaaagcacaaagcacactgacccgcct
ccctctgttgccaggacaacaggtctggtttatgatgagaagatgatggagcacctgaac
ctttgggacagacatcaccctgaacagcctcagaggatatttaaaatcttcgccaaacat
cagcagctgggattggtcggtcgttgcaaacggattccaactcgcctagcaacagagggg
gagctggccacctgtcacagtgtgcagcacattgagcagatgaaggccactgcagagatg
aagcccagagatctgcacaaactggggctggagtttaactccatcttcatcaacaaccag
agctaccagtgcgctctgctggctgcaggaggctgcttcagcgcggtggagaggatcctc
tcaggagaggtgagtaacggcgtggcgatcgtccgtcctcccggtcatcacgcagagaaa
gattctccgtgtggtttctgtttcttcaacacggcagcggtcacagctcgccacgcacag
aaaatatcccatgatgcaccgctgcgagtcctcatcctcgactgggacgttcaccacggc
aacgggacgcagcacatgttcgaggacgacgacagcgtcctgtacgtctccctccatcgc
tatgacaacggaacgttcttcccgtcctctttggatgccgccccggacagggtgggcaag
tctaaaggggcgggatttaacgtcaacgtggcgtggagcggcgggcggatgggcgactct
gactatctcgccgcctttcacagcgtcatcatgccgatcgcgaccgagtttaaccccggt
ctggttctggtgtcggccgggtttgatgcagcccgaggggatccgctaggagggtataat
gtgacacccgagggatacgcccacctcacacacttgctgatgtcactggccggggggcgg
gtcttactcatactggagggaggttataacctgtcgtccatctctgactccatggcgatg
tgcaccagcgtgttgctaggagaccctcctccctctttagcgacgcccttcccccctcct
catcacagcgcagtggcaacaatcaacgaggtcatccgtcaccacgccccctactggaag
tcgctacggatacgcatcccagagtccgtccgggtgtctgttccctccccaaagcatcgt
gggaaacgtagttctaaaggaaaaggcaggaagtcagagcaaagcagcacaaataaacca
ccgctgccccctacaggacagcagaacacaacgacggagtgtggtcttgagcagctcacg
cagggattggccggtttggacatcagtcaaattgcagccaatcaagctcctgctacgtca
accccagtgggcggggccaggccaaaggtccgccaaagcccggagaaggtggagtcagct
gcactgacacctgagaacagccaatcaaaagatagcacacaaactcaggatgttacagcg
gcagcgccagactcggttgcccctggagacaagcctgccagtgaagcaggggcgggacca
gaggaagagggagcgtgtggttggtcgaagcctcagacatctctggagctgacgtgcgga
ggacaggcggatacccctctctacgtggttgaccccctctcctggtgtcctcacctggac
gttgttaagcccctccccgctacaggtatcgacatcttccagccgtgtcaggactgcggc
tctgaggctgagaactggatctgtctcacctgctaccaggtgttctgtggtcgctatgtc
aacgagcacatggtgactcacggcgtcgtctctgaacaccccatggtgctgagcttctgt
gacctgtctgtgtggtgctacctgtgtgagtcgtacgtacacaaccagattctgtttgaa
gctaagaactcagctcactgtgccaaatttggagaggaaatccctccatggagctga
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