Eleginops maclovinus (Patagonian blennie): 134867465
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Entry
134867465 CDS
T09869
Symbol
col4a2
Name
(RefSeq) collagen alpha-2(IV) chain isoform X1
KO
K06237
collagen type IV alpha
Organism
emac
Eleginops maclovinus (Patagonian blennie)
Pathway
emac04510
Focal adhesion
emac04512
ECM-receptor interaction
emac04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
emac00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
134867465 (col4a2)
09140 Cellular Processes
09144 Cellular community - eukaryotes
04510 Focal adhesion
134867465 (col4a2)
09142 Cell motility
04820 Cytoskeleton in muscle cells
134867465 (col4a2)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
emac04147
]
134867465 (col4a2)
00536 Glycosaminoglycan binding proteins [BR:
emac00536
]
134867465 (col4a2)
Exosome [BR:
emac04147
]
Exosomal proteins
Exosomal proteins of other cancer cells
134867465 (col4a2)
Glycosaminoglycan binding proteins [BR:
emac00536
]
Heparan sulfate / Heparin
Extracellular matrix molecules
134867465 (col4a2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Collagen
C4
Motif
Other DBs
NCBI-GeneID:
134867465
NCBI-ProteinID:
XP_063744114
LinkDB
All DBs
Position
7:11995333..12056125
Genome browser
AA seq
1675 aa
AA seq
DB search
MSGTMQGQHERGLKNLRLLLLCLFIAILASGVHAGGKKHSGPCGGRDCSGGCKCFPEKGA
RGGPGPVGPQGPSGPPGRPGDAGIEGPKGQKGDHGRGGTMGPKGSVGMTGVPGFSGNDGI
PGHPGQAGPRGKPGADGCNGTQGESGSSGQPGYNGSPGFPGQPGWKGPKGDSLELSVFME
RFRGDPGMPGFKGIYGPLGNPGRQGNQGYPGPKGPQGPPGPRGPKGTMTKVLKGLSGDQG
DIGPPGLQGNSTHQQIQPPYGPTGLRGEKGLKGEIGDVADNKGETGVMGFPGPRGTSGAD
GRPGPRGDYGEQGPTGRDGLKGVRGEPGELVSLGSWPWSSGGGPPGPLGDQGPEGERGPV
GDQGIPGPPGRPASLSQQQVLDFFGPFGIKGESGEKGQPGDPGLPADRAGSPGTNGRPGA
KGPPGPKGSWSEFFKGPVGGRGRPGNAGFKGLKGDHGLCECSIVNSPPGPPGPAGERGDA
GMTGEYGREGDVGDPGPYGNFGVPGFPGRDGEPGQKGPKGEARVASNKGYPGDSGEPGPD
GVQGANGVSGRTGFAGISGTRGLPGEGLRGISGDKGYPGRPGQPGAPGLSGQDGAVLGGV
KGQRGLPGDDGLAGYDGVQGTPGAPGGCSPGDGGQVDITGPCDTFPGPAGLPGLPGDIGL
PGFKGPPGQKGSQGPLGEHGGKGETGDQGIGGRTGPPGFSGPRGDLGDPGRKGSVGAPGG
PGVPGRYGLQGEKGAHGVIFGASAGSPGDPGQPGLQGYKGQTGNPGEQGYPGLGGMPGMI
GQKGETGPLGLQGEEGRPGPAGRYGYPGDPGRAGLPGPQGSTGQPGLTGERGVDGEPGPP
GPIGLKGIPGPYGIDGGKGEHGPSGELGETGPDGRPGVPGMKGYKGSPGMSGFEGNRGNV
GVKGFSGQSGDPGTMGQVGPKGLLGQSGEKGDRGLRGPSGDKPHITAQLVVDMKGVKGDT
GYYGNQGFTGPRGVKGLPGVPGYEGTHGLPGEPSNNKGQIGDLGAEGLPGIKGMPGTTGN
RGITGFGGMPGNRGIKGGPGAYGASGEKGRNGFKGEKGPRIDLPGTTGFRGEHGLPGGQG
QKGVPGQPGDWGMPGFGGIVGKRGESGDPGIIGHPGSDGQKGTPGNQGQKGFTGAPGKDG
HPGFPGFPGNKGFSGVKGLYGLHGLKGQKGVPGTPGLDTTGQTGEPGSKGEKGTDGDPNS
QPGFPGTVGLKGFQGPLGDRGQPGSPGLRGPVGPEGTPDKPGLTGDPGSPGPKGYPGSPG
ANGFPGVNAPPGEKGVSGINGFPGIPGSKGLKGDRGSFGYRGPNGVSGKKGEKGEQGVMG
VPGIIGLKGGRGPSGPKGNTGHPGFRGFPGNQGPLPIPVRVPGERGPSGPLGIRGPEGVK
GESGPHGPHGDTGFMGPIGQKGMPGIGGTPGTPGYRGEFGQIGHPGLLGMEGQRGNPGIP
GITGMPGRSVSVGYLLVKHSQTAQVPMCPVGMSKLWDGYSLLYFEGQEKAHNQDLGLAGS
CLPRFNTMPFLYCNPGDLCYYASRNDKSYWLSTTAPLPMMPVEEGEIKPYISRCSVCEAP
SVAIAIHSQDITIPQCPVGWRSMWIGYSFLMHTAAGNEGGGQSLSSPGSCLEDFRTTPFF
ECNGAKGTCHYFANKQSFWLTSIDQSFHTEPASETLKAGQLLSRISRCQVCMKNL
NT seq
5028 nt
NT seq
+upstream
nt +downstream
nt
atgagtgggaccatgcaaggacaacacgagagaggactgaaaaacctgaggctgctgctt
ctgtgtcttttcattgccatcctcgcctctggagtgcacgcgggcgggaagaagcacagt
ggcccctgtggaggaagagactgcagcggaggctgtaaatgtttcccagagaaaggtgcc
aggggtgggccagggcctgtaggtcctcagggcccctcagggcctccaggaagaccaggc
gatgcaggcattgaaggcccaaaggggcagaaaggtgaccacggccgtggtggcaccatg
ggtcccaaaggaagtgtgggaatgaccggtgtacctggtttctctggaaatgatggcatt
cctggccacccgggacaagctggaccccgggggaaaccaggggcagacggctgtaacggg
acacagggagaatctgggtcatctgggcaacctggctataatggctcacctggctttcct
ggacaaccaggctggaagggaccgaagggagactctctggagctgagtgtgttcatggag
cgcttcaggggagatccaggcatgccaggattcaaaggaatatatgggcctctaggaaac
ccaggtagacagggtaaccaaggctatccaggaccaaagggtccccaagggcctccaggt
ccccgtggaccaaagggcacaatgaccaaagtgcttaaaggactcagtggagaccaaggg
gacattggaccaccagggttgcaaggaaactcaactcatcagcaaattcagcccccctat
ggacccacgggacttcgcggcgagaaaggtctcaaaggagaaataggagatgtggctgac
aacaaaggagaaactggtgtgatgggattccctggcccgcggggtacatctggtgcagat
gggcgtcctggaccaaggggagattatggggaacaaggaccaacaggaagagatggtctt
aagggagtcagaggtgaaccaggagaactggtttcattaggatcttggccttggtcttca
ggaggtggtcctcccggtcctcttggtgatcagggtcccgagggagagaggggcccggtt
ggagaccaaggcatacccggacccccaggtcgccccgcctccctatcacagcaacaagtt
ttggacttctttgggccatttggtataaagggggagtcaggagagaagggccaaccagga
gatccaggactccctgcggacagggcaggatccccaggcaccaatgggcgtccaggtgcc
aaaggccctccagggcccaaaggatcatggtctgagttcttcaaggggcctgttggtggg
agaggaaggcccggcaatgcaggctttaaaggattgaaaggtgatcacgggctgtgtgaa
tgcagcattgtaaactctccaccggggccacctggacctgccggggagcgcggcgatgct
gggatgactggagagtatggtcgagagggggatgtaggagatccaggtccatatggaaac
ttcggagtccctggatttcctgggcgcgatggtgagccgggacaaaaaggtccaaaagga
gaagcaagggtggcctccaacaaaggatatcctggagactcaggggagccggggccagac
ggtgtgcaaggagcaaatggggtttcaggccgaactggttttgctggtatatctgggacc
cgaggtcttccaggagaaggtctaagaggaatatctggagacaaaggttacccaggtcgg
cctggtcaacccggcgcaccagggctaagtggacaagacggtgcagtccttgggggtgtc
aagggccaacgtggtttacctggggacgacggccttgcaggttatgatggagttcaagga
acacctggcgctccaggcggctgtagtccaggagatggaggacaggtggatataacaggt
ccttgtgacactttccccggacctgctgggcttcctggacttccaggcgacattggatta
ccaggtttcaaaggtcctccgggccagaagggatcacagggtcctcttggagaacatgga
gggaaaggcgaaacaggagatcaaggcataggtggccgtactggaccaccaggtttttcc
ggcccccgtggagacttgggtgatcccggccgcaaaggttcagtaggagcccctggaggg
cctggtgtgcccggtagatacggtctgcaaggtgaaaagggtgctcacggagtgattttt
ggagcgtcggcaggctcccccggtgacccagggcagccgggactgcaagggtataaaggc
cagaccggaaatccaggagaacaaggctatccaggattgggcggtatgcctggtatgatc
ggccaaaagggtgagactggccctctgggtttgcagggggaggaagggaggcctgggcca
gcaggcaggtacggctaccctggtgaccctgggcgagcaggtctacctgggccgcaaggc
agtacaggacaaccaggtttgactggagagaggggagttgatggagagccgggccctcca
ggtccaataggattaaaaggaatcccagggccatatgggattgatggtggtaagggagag
cacggcccatcaggtgaactgggagagactggtccagatggacgcccaggagttccagga
atgaagggatacaaaggatctcccggcatgtcaggctttgagggtaacaggggcaatgtt
ggggtgaagggcttcagtgggcaaagcggtgaccctggaacgatgggccaagtgggccca
aaaggattgctgggtcaaagcggagagaaaggtgatcgtggtttgagagggccctctggg
gacaagcctcacatcaccgcccagttggttgttgacatgaagggagtgaagggggacaca
ggttattatggaaatcaaggtttcaccgggccgagaggtgttaagggtttgcctggggtg
ccgggttatgagggaactcacggacttcctggagaacccagcaataacaagggtcaaatt
ggagacctaggtgcagaggggctgccgggaataaaaggaatgccgggcacaactgggaac
agaggaattactgggtttgggggaatgccaggcaacaggggcattaaaggaggtcctggt
gcctatggtgcatcaggggaaaaaggaaggaatggatttaaaggtgagaaaggcccacgc
atagacctaccaggaaccaccggatttagaggagagcatggtcttccaggaggacaaggc
cagaaaggagtacctggacaaccaggggattggggcatgcctggatttggtggaattgta
gggaaaagaggagagtcgggggatcctggaataatagggcacccaggctctgatgggcag
aagggaactcctggtaaccaaggtcaaaaaggctttactggagctcctggaaaggacgga
catccgggttttccaggcttcccaggaaacaaaggtttctctggcgtgaagggtctttat
ggattacatggacttaaaggacaaaagggtgtccccggcacaccaggtctggataccact
ggacaaactggggaaccaggaagcaaaggagagaagggaacagatggggaccccaacagc
cagccaggttttcccggcacagtgggtttgaaaggctttcagggccctctaggtgaccgg
ggtcaacctggatcgccaggactccgaggccccgttggaccggaggggacccctgacaaa
ccaggtctcacaggggaccctggctctccaggacctaaagggtacccaggttcccctgga
gcaaatgggtttcctggtgtaaatgctccccctggtgaaaaaggtgtatcaggaataaat
ggttttccgggaatccctggaagcaaaggactcaaaggagatagaggttcatttggatac
agggggccaaacggtgtttctgggaagaaaggggaaaaaggagagcaaggagtgatgggc
gttcctgggatcattggtttgaagggaggaagagggccatctggtccaaaaggaaacact
ggacatccaggttttcgtggattcccaggaaaccagggtccccttccaattccagtgaga
gtcccaggagagagaggcccctctggaccactgggtatccgaggaccagaaggggtcaaa
ggggaatcagggccacatgggccccatggcgatacaggtttcatgggacccattgggcaa
aagggcatgccggggattggtggtacaccaggaacacctggataccgtggagagttcgga
caaattggccaccccggtctgctaggcatggaaggtcaacgcggcaaccccggtatccct
gggataactggtatgccgggacgcagcgtcagcgtgggatacctgctggtgaaacacagt
cagacagcacaggtgcccatgtgtcctgtgggcatgtctaaactgtgggacggctacagt
ctgctgtacttcgagggccaggagaaggcccacaaccaggaccttggtctggctggctcc
tgcctcccacggttcaacaccatgcccttcctgtactgcaatcctggagacctttgttac
tatgccagcaggaatgataagtcctactggttgtcgacaaccgctcctcttcccatgatg
cctgtggaagagggagagattaaaccgtacatcagccgctgctcagtatgtgaagctcca
tcggttgccatcgcaatccacagccaggacatcaccatccctcagtgtcctgtgggctgg
cgcagcatgtggatcggctactccttccttatgcacacagcagcaggaaatgaaggcgga
ggtcagtctttgtcatcgccgggctcttgcctggaggacttccgcacaacaccgttcttt
gagtgtaacggggccaaaggcacatgccactactttgccaacaagcagagcttctggcta
acctccatcgatcagtctttccacactgagccggcatcagagacgctcaaagccggtcag
ctgctgtcacgcatcagccgctgccaggtctgcatgaagaacttgtga
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