Eleginops maclovinus (Patagonian blennie): 134867655
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Entry
134867655 CDS
T09869
Name
(RefSeq) transcription initiation factor TFIID subunit 4-like isoform X1
KO
K03129
transcription initiation factor TFIID subunit 4
Organism
emac
Eleginops maclovinus (Patagonian blennie)
Pathway
emac03022
Basal transcription factors
Brite
KEGG Orthology (KO) [BR:
emac00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
134867655
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
emac03021
]
134867655
03036 Chromosome and associated proteins [BR:
emac03036
]
134867655
Transcription machinery [BR:
emac03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIID
134867655
Coactivators
SAGA/TFTC/STAGA complex
134867655
Chromosome and associated proteins [BR:
emac03036
]
Eukaryotic type
Histone modification proteins
HAT complexes
TFTC complex
134867655
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TAF4
TAFH
Motif
Other DBs
NCBI-GeneID:
134867655
NCBI-ProteinID:
XP_063744452
LinkDB
All DBs
Position
1:19723672..19750616
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AA seq
942 aa
AA seq
DB search
MAAGSDLLDDVFFSTEVDEKVVSDVVGSLESQLTGAVSAKTTTRVQTAANHVGNSSVVIN
SNVRGSKMGLSKQELAKAGTRVQGGVISSTGSPGSSMDGAAGKTSSMTAAQSQPKLGTAS
GVVTVESDGTSGVQKPATAAVQTLNGSAVLMNCHVTGGISSKTSQSAVTPVNNGPVSATK
EGATVLSASTIIRTSTQHAVISSQPSVNSVPTVTLVRPSMQTPTNPSHSGGTTVLTSPTV
SVTSTTGSLINKFDSTKAIMPVVATGTTATMRSHTVLQNVRTSVPSTIAAIPPAGIRAIA
PQVLAPRLTQPQQNTSNIQNIQLPPGMVLVRSESGQLLVIHQQTLAQMQAQTQSQSAMTP
RPAAPSSTPPVQITSLQAPGASLLARPVTPTTIIKQGATVQTTVATTTTLQRPPVLQNTI
MLGGTAASTGQPIGTPTPVQPGSAATAVTQRVTGTPVTPTAITAETLENVKKCRNFLSTL
IKLASSEKQSSETTANVKELVKNLLEGKIEPEDFTSRLYRELNSSPQPYLVPFLKRSLPA
LRQMTPDCDAFIHQSLLPLPSIQLAAAASTALTAVVLRPPLSMATTMAGTKTTVISLTQT
PRSKPGLIVPQQQTIVRPQVTLAQSPMVTVRGQSQSRIIVGQPQMVKHLQTAVRQFTPVV
KGGQIVGQTAVSAAQKLKEAGGGTFRDDDDINDVASMAGVNLSEENARILATSSELVGAV
TRSCKDEAFLSPSLLTRRALEIGKKFGVGELGTNVINYISYAAQQRLRHLLEKVSLAAQH
KNLTFKEDERCEQVSDVRSQLKYFEQLDQMEKQRKEGLEREILLKAAKSRSRQEDPEQLR
LKQKAKEMQQQELALIRQREANLTALAAIGPRKKRKMDSPVRGASAEGSGSSPSQPGGSG
GAASRQFMRQRITRVNLKDLLFCLENERGNSRSHLLYKGFLK
NT seq
2829 nt
NT seq
+upstream
nt +downstream
nt
atggcggcgggctccgatttgctggatgatgttttcttcagcacagaggtggacgaaaaa
gtagttagtgatgtagtcggatctctggagtctcaactaacaggagcagtgtccgccaaa
acaacgaccagggtccagactgcagcaaatcacgtcggcaactcatctgtagttattaat
tccaatgttcggggcagcaaaatgggactttcaaaacaagagcttgctaaagcagggaca
agagtgcaaggaggtgtcattagcagtacggggtccccgggttcaagcatggatggagca
gctggaaagacatcgagtatgacagccgctcagagtcagcccaagctggggacagctagc
ggagtcgttacggtagaatcggatggaacatctggtgtgcagaaacctgcaactgctgct
gttcaaactttgaatggaagtgctgtgttgatgaactgtcacgtcaccggaggcattagc
agcaaaacctcacagtcagctgtcacacctgtcaacaacggacctgtttctgcgactaaa
gaaggcgcaacagttttgtccgcaagtactattatacgaacttcaacgcagcatgctgtg
atttcgtctcagccatcagtaaacagtgtaccgactgtcacgcttgtgagaccatctatg
caaactcccactaacccctctcacagcggaggcaccaccgttttaacatcacccactgtc
agtgtgacaagcacgaccggctcgcttatcaacaaattcgactccacaaaagctataatg
ccggttgttgcgactgggaccacagcgaccatgaggagccatactgttttgcaaaatgtg
aggacttcagtaccgtcaacaatcgctgcaattcctcctgctggaatacgagctattgct
ccacaggtgttggccccacgactcactcagcctcaacaaaacacttcaaatatccaaaac
atccagctccctccaggtatggttttggttcgcagtgagagtgggcaactcctggtgatt
caccaacagaccttggctcagatgcaggctcagacgcagtcccaaagcgccatgactcca
cgacctgcagccccctccagcactccacctgtccagatcacttctcttcaggctccgggc
gcgtcactgctggcccgtcctgttacccccaccaccattattaaacaaggtgccacagtc
cagaccactgtggcaaccaccaccacactgcagcgtcctccagtactgcagaacaccatc
atgctgggaggaactgccgcctccacgggacagccgataggaacccccaccccagtgcag
cccggatctgcagccacagcggttacacagagggtaactgggacccctgtcactccaaca
gctatcacagctgagacactggagaatgtaaagaagtgtagaaactttctgtccacgctg
atcaagttggcctctagtgaaaagcagtcttctgagactacagccaacgtgaaggagctg
gtcaagaacttactggaagggaagatagagcctgaagatttcaccagtaggttataccgg
gagctcaactcctcgcctcagccgtaccttgtgcctttcctgaagaggagtctcccagca
ctgcgtcagatgaccccagactgcgatgccttcatccatcagagcctcctgcctctgccc
agtattcagcttgctgcagcagcctccacggccctcactgccgtggtgctgagacctcct
ctctccatggccaccaccatggccgggaccaaaactacagtcatcagcctcactcagaca
cctcgtagtaaacctggactgatagtgccacagcaacagacgatagtgaggccacaggtg
acactggctcagtctcccatggtaacagtcagaggacaatcccaaagccggatcattgtg
gggcagccgcagatggtcaaacatcttcagacagcagtgaggcagtttactccagtggtc
aaaggagggcaaattgtcggtcagactgctgtcagtgctgctcagaagctcaaggaagca
ggagggggaaccttcagggatgacgatgatatcaatgatgtggcctccatggcgggagtc
aacttgtcggaggagaatgcccgtatcttagcaaccagttctgagcttgttggcgcggtg
actcgatcctgtaaggacgaggccttcctctccccctctttactcacccggagagctctg
gagattggtaagaagtttggtgtcggtgagttggggacaaatgtgatcaactacatttcc
tacgctgcacagcagcgactaagacacctgctggaaaaagtgtcactagcggcgcagcat
aaaaacctaaccttcaaggaggatgagcgctgtgagcaggtcagcgatgtgcgatcccaa
ctaaaatactttgagcagctggatcagatggagaagcagaggaaggaagggctggagaga
gagattctgttgaaggctgctaagtctcggtcacggcaagaggaccccgagcagctgaga
ctcaaacagaaggccaaagagatgcagcaacaggagctggctctgatcagacaaagagaa
gccaacctaacggcgctggcagcaatcggaccgaggaaaaaacggaaaatggactctcct
gttagaggcgcaagtgcagagggctcggggtcgagcccctctcagcccggcggctccggt
ggagcggcctccagacagtttatgagacagcgcattaccagggtgaacctcaaggacctg
ctcttctgtctggagaatgaaagagggaacagtcgctcacacctgctctataaaggcttc
ctcaaatag
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