| Entry |
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| Symbol |
col18a1a
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| Name |
(RefSeq) collagen type XVIII alpha 1 chain a isoform X1
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| KO |
| K06823 | collagen type XVIII alpha |
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| Organism |
emac Eleginops maclovinus (Patagonian blennie)
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| Brite |
KEGG Orthology (KO) [BR:emac00001]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:emac04147]
134867728 (col18a1a)
00535 Proteoglycans [BR:emac00535]
134867728 (col18a1a)
00536 Glycosaminoglycan binding proteins [BR:emac00536]
134867728 (col18a1a)
Exosome [BR:emac04147]
Exosomal proteins
Exosomal proteins of other body fluids (saliva and urine)
134867728 (col18a1a)
Proteoglycans [BR:emac00535]
Extracellular matrix (ECM) proteoglycans
Basement membrane proteoglycans
134867728 (col18a1a)
Glycosaminoglycan binding proteins [BR:emac00536]
Heparan sulfate / Heparin
Extracellular matrix molecules
134867728 (col18a1a)
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| SSDB |
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| Motif |
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| Other DBs |
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| LinkDB |
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| Position |
7:20835939..20914070
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| AA seq |
1456 aa
MPKMRTSFGVLFLLTLWVVYSDAWLWGWTGTTTMPPTVDHEGSGSSEGSGEPSPENIAMV
RSEMIDEGHGIQKVAQTWDQTTEGLRLTPLVPTTQPRSGGASEKGTEGISSRIRKPEESG
VTLLQLIGDPPPSTITQVFGPDNSPGYEFGPDANSGQLARAYLPSPFYRDFSLIFNLKPT
SERGGTIFSITDAAQQIMYVGVKLSAVQGGNQYVILYYTEPDSQQSYEAARFRAPSMRDT
WTRFAIAVRDDKVMFYLNCDTDPQVLHLERSPDEMELELGAGVFVGQAGGADPEKFLGVI
EELRIVGDPRAAERHCEEDGDDSDMASGDGSGDDGKTSRPAGETHRWTTTPPSSRPIQQP
PLHKKDEEFTARETASDSRHSSVSVENRPGLPGSSGPAGAKGEKGSAGDTGMKGDRGPIG
PKGESSSGSRGGSRGEKGEPGEKGTKGSAGFGYIGKKGEPGPAGPVGPPGPPGPATEFSV
GGHGSVTSRAPGPQGPAGPPGATGPEGPPGTDGEPGDPGEDGKTGPEGPPGFPGTSGEPG
LKGDKGDRGDSQPGPRGPPGLPGPPGPGIRSTFADMEGSGFPDPESVRGQPGLPGPPGPP
GPPGPSTTGTSSSSGAFGPPGKDGLPGQPGLPGIPGTDGNPGAPGPKGEKGDSGELGLPG
AIGEKGSGGDPGIPGVPGQTGLAGLPGPLGPVGPPGPPGPPGSGYRVGFDDMEGSGGGFS
NGLPGARGPEGIQGSPGLPGLPGKAGLPGMPGQKGSEGAVGRDGRSGLDGFPGPQGPKGD
GGDKGERGDPGRDGSGVPGPPGPPGPPGQIIYQTDGNAGGVAGEVGRQRESGLPGQAGFP
GPIGPKGDRGDPGVPGYGVKGEKGEPGLVIGSDGNLMHLDGLSGEKGDRGLPGPVGPTGP
YGPAGIKGEIGMPGRPGRPGVNGYKGEKGESSGGSGYGYPGVPGQPGPPGPPGPPAPSTP
FDRFNRYDDTSRNYPATKGEKGEHGDRGLPGIPGTASNFDIYAFKNELKGERGDVGVKGE
KGEPSGGYYDPRFGGVQGQPGPPGQPGLEGPKGDSVVGPPGPQGPPGTPGIGYDGRPGSP
GPPGPPGPPALPGTYRPNNPVSIPGPPGPPGQPGSPALSSGVTVLRSYETMVATARRQSE
GSLIYILDKADLYLRVRDGLRQVMLGDYNPFFRDLENEVAEVQPPPVIVYTETQDQSQNN
GAGHYSHGGSAVLPIEPPPQPPVEPRYPPQYDPRFPDPRQTGHTDGRLVPHQTDNRYPVT
PRRPSLPIPQPAAPVDPSASGLHIIALNAPQTGNMRGIRGADFLCFQQARAVGLKGTFRA
FLSSKLQDLYTIVRRADRDNFSIVNLKDQVLLDSWESMFGDNARKMRENVPIYSFDGRDI
LRDSAWPEKMVWHGSNNKGHRQTDHYCETWRAGDHAVSGLASSLQSGHLLQQSSSSCSGS
YIVLCIENAFTTHSKK |
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| NT seq |
4371 nt +upstreamnt +downstreamnt
atgccaaaaatgaggacctcgtttggagttttgtttttgttgaccctctgggtggtctac
tctgatgcttggctctggggatggactggtactacaactatgcccccaacagtggaccat
gagggatctggcagttcagaaggtagtggagaaccttcaccagagaatattgcaatggtt
cgatcagagatgatcgatgagggacatgggatccaaaaggttgcccagacttgggatcag
accactgagggacttcgactgacccctctagtacctacaacacaaccaaggagtggtggt
gcatcagaaaagggaacagaagggatttcatcacgcattcgtaaacctgaagaaagtggt
gtcaccctgctacagctgattggggatcctcctcccagcaccattactcaggtcttcggc
cccgacaacagccctggctatgagttcggccctgatgccaactcaggccagctggcccgc
gcctacctgccgagccccttctaccgagacttctcccttatcttcaacctgaagcccacc
tccgaaaggggcggcaccatcttctccatcactgatgccgcacagcagatcatgtacgtg
ggtgtgaagctgtccgcggtgcagggcggcaaccagtacgtcatcctgtactacaccgaa
cccgactcccagcagtcgtacgaggcggccaggttccgtgcgccctccatgagggacacc
tggactcgctttgccatcgctgtgagggacgacaaggtgatgttctacctgaactgtgac
acggaccctcaggtgttgcacctcgagagatcccccgacgagatggagctggagttaggc
gctggggtctttgtggggcaagctggaggagctgatcctgagaagtttctgggggtgatc
gaggagctgaggattgtgggagatccccgcgctgctgagaggcactgtgaggaggatgga
gatgactcagacatggcttcaggtgatggaagcggcgatgatggtaagacttcaagacca
gctggagagacgcatagatggacgactactcctccatcctcccggcccatccagcagcct
ccactccacaagaaggacgaggagttcactgccagagaaacagcgagtgactcccggcac
agttcagtctctgtggagaacaggcccgggctgccagggtcctcagggccggccggggcg
aaaggagagaagggcagcgctggggacacgggaatgaaaggagacaggggtccgatcggg
ccgaagggagaatccagctccggatcacgggggggatcccgtggagagaagggagaaccc
ggggagaagggaacaaagggcagtgcaggctttggctacataggaaagaagggagagccc
ggccctgctggcccagtcggcccccctggccctccagggcccgcaacagagttttcagtc
ggcggtcacggttcagttacttccagagcccccggaccccaaggaccagctggaccacca
ggcgctacaggccctgagggaccaccaggaactgatggggagccaggtgatcctggtgag
gatggaaaaaccggccctgagggaccccctggcttcccaggaacctcgggtgagcctgga
cttaaaggagataagggcgaccgtggagatagtcaacccggccccagaggtccaccggga
cttcccggacccccaggtccaggaatcagatctacctttgcggacatggaaggctcaggg
ttccctgatcctgaatctgttcggggtcaacctggcctaccaggcccccctggccccccc
ggtcctcctggtccctctacaacaggcacatcatcgagttctggggctttcggaccccca
ggaaaggatggattgcccggtcaacctggcctgcctggtattcccgggacagatggcaac
ccaggagctcctggtcctaaaggagaaaagggtgattcaggcgagctgggtcttccagga
gcgattggagagaagggatctggaggagacccagggataccgggtgttccgggacagacc
ggattggctggtctgcccggacccctcgggccagtcggaccaccggggcctcctgggcct
cctggatctggctaccgtgtcggatttgacgacatggagggctctggtggaggtttcagc
aacgggcttcctggcgccagaggacctgaaggaatacagggttctcctggcctgcctgga
cttcctggtaaagcggggctgcctggtatgcccggtcagaagggcagtgaaggagccgtc
ggaagagacggacggtcaggcctggacggctttccaggacctcagggaccaaaaggtgac
ggtggtgacaaaggagagaggggtgaccctggtcgggatggatccggagtccctggcccc
cccggcccacctggacccccgggacaaatcatctaccagactgatggcaatgctggcggt
gtggctggtgaggttgggcggcagcgagaaagtggtttacccggtcaagctggattccct
ggtcctattgggccaaagggggacagaggagaccctggagttccaggctatggagtgaag
ggggagaaaggtgaaccaggcttagtgattggatctgatggaaatctgatgcatctggat
gggctgtcgggggagaagggagacagaggattacctggacctgttggacccactggcccg
tatggtccggctggaataaagggggaaattggaatgcctggaagacctggtcgtcctggt
gtgaacgggtacaaaggagagaaaggagaatcatcaggaggatcgggctatggctaccca
ggagttcctggccaacctggaccacccggaccacctggccccccagcaccaagcactccc
tttgatcgcttcaatcgctatgacgacacttcaaggaattacccagcaactaaaggagaa
aaaggagagcatggtgaccgaggactgccgggaatcccaggaacagcctctaactttgat
atttacgcattcaagaatgagctgaagggagagcgcggagacgtgggtgtgaagggagaa
aagggagagcctagtggaggatattacgacccacggtttggaggagtgcaaggacaacca
gggcctccgggccaaccgggcctagagggtccaaagggagactctgtggtgggacctcct
ggaccccaggggccaccaggaaccccagggattggttacgatggtcgtccaggttctcca
ggaccacctggacctccaggacctcccgcacttcctggaacatacaggcccaataacccc
gtcagtattcctggacctcctggtcctcctggccaaccaggaagtcctgctctctcctct
ggggttactgtgttgaggtcatatgaaacaatggtagctaccgccagacgccagtcagag
ggcagcctcatctacatcctggacaaagcagacctctatctgagagtacgcgatggactg
cgccaagtcatgctcggagattacaatcccttcttcagagatctggaaaacgaggtggca
gaggtccagcccccccctgtcatcgtgtacaccgagacccaggatcagtcccagaacaac
ggagcgggccattactcccatggcggttctgccgtactacccattgagcccccaccccaa
ccacctgtggagcccagatatcccccgcagtatgatcccagattcccagaccccagacag
acaggtcacacagatggacggttagtcccccaccagactgacaacagataccctgtaact
cccagaagacccagcctccccatcccgcagcctgccgcccctgttgacccgtcagcatca
ggactacatatcatcgccttgaacgcccctcaaactggcaacatgcgaggaattcgtgga
gccgacttcctgtgcttccagcaggcccgcgctgtcggcctgaagggaactttcagggct
ttcctgtcctctaagcttcaagacctgtacaccatcgtccgcagggcagaccgggacaac
ttctccatcgtcaacctcaaggaccaagtgttgttggacagttgggagtctatgtttggg
gacaacgcgcgcaaaatgagggagaatgtaccgatctactccttcgacggtagagacatc
ctcagggacagcgcatggccagagaaaatggtctggcatggatcaaacaacaaaggccac
cggcaaacagaccactactgtgaaacatggcgggcgggagaccacgctgtgtctggcctg
gcatcgtcactacagagcggacacctcctgcagcagagctccagcagctgctcaggctcc
tacatcgtcctctgcattgagaacgccttcacaacacactccaaaaaataa |
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